KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112218603
Entry
112218603         CDS       T05605                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL2
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    112218603
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:otw01009]
    112218603
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:otw03021]
    112218603
Protein phosphatases and associated proteins [BR:otw01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     112218603
Transcription machinery [BR:otw03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     112218603
    Little elongation complex (LEC)
     112218603
SSDB
Motif
Pfam: ELL Occludin_ELL DUF4351
Other DBs
NCBI-GeneID: 112218603
NCBI-ProteinID: XP_024235294
UniProt: A0AAZ3QVJ3
LinkDB
Position
LG19:29606186..29646000
AA seq 603 aa
MAALRQEHRYGLSCAKINKNVQNKTLYHVKLTDTAIRTLEAYQNLKGSLPNQPAICFKGS
QGYIKIPAPSPDASDALRVFSFYLSSDSKDKPQASFDCTHQYVSREGREHLEGQGSIQDK
ITVCATDDSYQMTRERMSQVEKDIMSRSAIEIKPGSTRGKCVKIQRKQGLSSSMDSSSNK
HSPSNKRSGAPSPVALRPLRDRIIHVLALKAYRKPELLLWLERERASPKDKADLGAVLDD
VAKLNPKDHSFTLKDEFYSHVQKDWPGYLEEEKQLIHRLLARKLQPLSSSSQLKSFQSNH
SFHKTPGDSPSQLSPVKTPSVKRPFPSELSDCQTPKKQRLLDHSLPLQSLSNGHLGPIGA
RSSSGPGNTSVQTKTEFERTNNHIQGSPNGLYTRHKLDGSSSIPKLERTEPVPAVPSPKA
PQTEPSICTDQQLANGQHKKKKSKKHKDKEREHLKQDWTENSPDLKQNQEHFNDHEGAKT
PVTRTSPEELPDYFIKYNIITASEQRKQYKEDFCAEYDEYRALHHRIGTITEMFVQLGSK
INTLAHGTQEYKLMEDQILQKYRKYKKKFPGYREEKKRCEYLHQKLSHIKGLILDYDCIQ
APS
NT seq 1812 nt   +upstreamnt  +downstreamnt
atggcagcgctgagacaggagcatcggtatggactctcctgtgcaaaaatcaacaaaaac
gttcaaaataaaactctgtatcacgtcaagctaactgataccgccattcgaacgcttgaa
gcctaccaaaatcttaagggatccttaccaaatcagccagcaatttgcttcaaggggagc
caggggtacatcaagatccccgccccgtccccagatgcctcggacgcactacgggtcttc
tccttctacctgtccagtgatagcaaggacaaacctcaggccagcttcgactgcacacac
cagtatgtctcaagggagggcagggagcacctggagggccagggcagtattcaggacaag
atcactgtgtgtgccactgatgactcgtaccagatgacccgggagcgcatgtctcaggtg
gagaaggacatcatgagcaggtcggccatcgagatcaagccaggctccactcgtggtaaa
tgtgtgaagatccagaggaagcagggcctgtcgtcaagcatggacagcagcagcaacaag
cactcccccagcaacaagaggagcggggcccccagcccagtggccctccggcccctaaga
gaccgcatcatccacgtcttggccttgaaggcctacaggaagcctgagctgctgctgtgg
ctggagagggagagggccagtcctaaggacaaggctgacctgggagcagtactggacgat
gttgctaaactgaatcccaaagaccacagctttactctgaaggatgagttctacagtcat
gtccagaaggattggcccggttacctagaggaagagaagcagctcatccataggctcctg
gccaggaaactgcagccactgagcagcagtagccagttgaagagtttccagtcaaaccat
tcattccacaaaacccctggggattctccgtcacaactcagcccggtcaaaactccctct
gtgaaacgcccatttccctctgagctatctgattgtcagacccccaagaagcaaagacta
ttagaccacagtttacccctgcagtccctttccaatggacaccttggtcccattggagcc
cgtagctcatctggtccaggcaacaccagtgtccagaccaaaacagagtttgagagaacc
aacaatcacatccagggaagccctaatggtctttacacacggcacaaactggatggttcc
tccagcattcccaagctggagaggaccgagccggtcccagccgtaccaagccccaaggcc
ccacaaactgagccctccatctgcactgaccagcagctagccaacggccagcacaaaaag
aagaagtccaagaagcacaaagacaaggaacgggagcacttaaaacaagactggacagag
aacagtcccgacctgaagcagaaccaggaacatttcaatgaccatgagggggctaaaaca
cctgtcactcgtacgtcaccggaagagctgcccgactatttcataaagtacaacatcatc
acagcctcagagcaacggaaacagtacaaggaggatttctgtgcggagtatgatgagtac
agggccctgcatcaccggatcggtacaatcacagagatgtttgttcagctgggctcaaag
atcaacactctcgcccacggtacacaggaatacaagctcatggaggaccaaatactgcag
aaatacagaaaatataagaagaagtttcctggttaccgggaagagaagaagcgatgcgag
tatctgcatcagaaactgtctcacatcaaaggtctgatcctggactatgactgtatccag
gccccttcatag

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