Oncorhynchus tshawytscha (Chinook salmon): 112218642
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Entry
112218642 CDS
T05605
Symbol
cpt1b
Name
(RefSeq) carnitine O-palmitoyltransferase 1, liver isoform
KO
K08765
carnitine O-palmitoyltransferase 1, liver isoform [EC:
2.3.1.21
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00071
Fatty acid degradation
otw01212
Fatty acid metabolism
otw03320
PPAR signaling pathway
otw04148
Efferocytosis
otw04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
112218642 (cpt1b)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
112218642 (cpt1b)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
112218642 (cpt1b)
03320 PPAR signaling pathway
112218642 (cpt1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
otw03029
]
112218642 (cpt1b)
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.21 carnitine O-palmitoyltransferase
112218642 (cpt1b)
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
112218642 (cpt1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Carn_acyltransf
CPT_N
PANTS-like
Motif
Other DBs
NCBI-GeneID:
112218642
NCBI-ProteinID:
XP_024235385
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Position
LG19:complement(31923730..31934658)
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AA seq
771 aa
AA seq
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MAEAHQAVGFQFTVTPDGIDLHLSREVLKHIYLSGVTSWIKRAIRFKNGILTGVYPASPS
SWLIAVIAIMSTMYARIDPSLGMIDTIKRTLPVSDYMTVQTQTVLSAILFATGLWLSLIL
MLRYILKALLSYHAWIFESHGKMSFCTKLWLSLVKMFSGRRPLLYSFQASLPRLPVPSVD
DTITRYLESVRPLLDDEQYNQMEVVANDFKRDEAPKLQKYLILKSWWATNYVSDWWEEYI
YLRGRSPIMVNSNFYAMDLLYMIPTHRQAARAGNVVHAMLQYRRKLERGEHAPLRALGVV
PMCSYQMERMFNTTRIPGIETDFVQHLSDRKHLVVYHKGRFFKVWLYYGGRHLWPSELET
QFQRILDDTTVPQPGELKLAALTAGNRVPWARSRLKYFSQGVNKASLEAIETSAFFLTLD
DEAHGYDPDKLRSLDLYAKSLLHGKCYDRWFDKSFTLIAYKNGKLGVNAEHSWADAPIVG
HMWEYVLATDCFHLGYTEEGHCKGDINKGLPPTAKLQWDIPLECQEVIEDSYMVAKEIAD
DVDFHGCLFDEFGKGLIKKSRTSPDAFIQLALQLAQFRDKGEFCLTYEASMTRMFREGRT
ETVRSCTIESTAFVRAMQDKNTKSAQRLDLFRKAADKHQNMYRLAMTGAGIDRHLFCLYI
MSKYLNIDSPFLKQVLSEPWRLSTSQTPQQQLNMVDINKFPRYVGAGGGFGPVADDGYGV
SYIIVGENLITFHISSKFSSPETDSYRFGQNIRQAMLDIRALFDQNDKKEM
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcacatcaggcggttggcttccagttcaccgtcaccccagatggcatcgac
ctccacctgagccgcgaggtactcaaacacatctacctgtcgggagtgacatcatggata
aagcgcgccataagatttaagaatgggatattgacaggggtctaccctgccagcccatcc
agttggctgatcgctgtgatagccatcatgagcaccatgtatgccaggatagacccatca
ctgggaatgatagataccatcaagaggaccctgcctgtcagtgactacatgacagtgcag
acccagacagtgctgagtgccatcctgtttgccacgggcctgtggctctctctcatcctc
atgctgaggtacattctcaaggcccttctctcctaccacgcctggatctttgagtcccac
ggcaaaatgagcttctgcaccaaactctggctgagtctggtcaagatgttctctgggcgc
agacctctcctctacagcttccaggcctccctacccagactacctgtgcctagcgtggac
gacaccataaccaggtacctggagtcagtgcgccccctactggatgatgagcagtacaac
cagatggaggtggtggccaatgacttcaagagagatgaggcacccaaactccagaaatac
ctcatcctcaaatcctggtgggctactaactacgtgagtgattggtgggaggagtacatc
tacctgagaggcaggagtcccatcatggtcaacagtaacttctacgccatggatctgctg
tacatgattcccacacacagacaggcagctcgggcagggaatgtggttcacgctatgctg
cagtaccgacgcaaactagagagaggagaacatgcaccgttgagggctctgggggtggtg
cccatgtgttcctatcagatggagaggatgttcaacaccacacgtatccctggcatagag
acagactttgttcagcacctgagtgaccggaagcacctggtggtgtaccataagggacgc
ttctttaaggtgtggctgtactacggggggcgtcacctctggccctctgagctggagact
cagttccagaggatcctcgacgacaccacggtgccacagcctggggaactcaaactggct
gccctcacagccggcaacagagttccttgggcgcggtctcgtctgaagtacttcagccag
ggtgttaacaaagcctctctggaggccatcgagacgtcagccttcttcctcacccttgac
gacgaggcacacggttacgaccctgacaagctgagatcattggacctgtacgccaagtcc
ctgctgcacgggaagtgttatgacaggtggtttgacaaatccttcaccctgatcgcttat
aagaatggtaaactaggggtcaatgcagaacactcgtgggcagacgctcccattgtagga
cacatgtgggagtacgtcctagcaacagactgcttccatctgggttacacagaggaggga
cactgcaaaggagacatcaacaagggcctgcctcccaccgccaaactacaatgggacatt
ccattggagtgccaggaggtcattgaggattcctacatggttgccaaggagatagctgat
gacgtggacttccatggctgtctgtttgatgagtttgggaaaggcctgatcaagaagagt
aggaccagtcctgatgccttcatacagctagcactgcagctggctcaattcagggataag
ggggagttctgtctgacgtatgaggcctcgatgacccggatgttccgggagggtaggaca
gagacggttcgctcctgcaccatagagtccacagccttcgtcagagccatgcaagacaag
aacactaagagtgcccagaggttggacctcttccggaaggctgcagacaaacaccagaat
atgtatcgtctggccatgacaggcgctggcatcgacagacacctcttctgtctttacatc
atgtccaagtacctcaacatcgactcaccattcctcaaacaggtgttgtcagagccctgg
aggttgtccactagtcagactcctcaacagcagctcaacatggtcgacatcaacaagttc
ccaagatacgtgggtgcaggaggggggtttggccctgtggctgatgacggctatggcgtc
tcttacatcattgtaggagagaacctcatcacattccacatctccagcaagttctccagc
cctgagacggactcgtaccgctttggacagaacattcgacaggccatgctggacattcgt
gcgctattcgaccaaaacgacaagaaagagatgtga
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