Oncorhynchus tshawytscha (Chinook salmon): 112218660
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Entry
112218660 CDS
T05605
Symbol
fbxl13
Name
(RefSeq) dynein regulatory complex subunit 6 isoform X2
KO
K10279
dynein regulatory complex subunit 6
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112218660 (fbxl13)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112218660 (fbxl13)
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
112218660 (fbxl13)
Cilium and associated proteins [BR:
otw03037
]
Motile cilia and associated proteins
Nexin-dynein regulatory complex
112218660 (fbxl13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box-like
F-box
LRR_Zer-1
LRR_FBXL18
LRR_At5g56370
LRR_14
LRR_8
RHSP
LRR_RPS2
Tex55
Motif
Other DBs
NCBI-GeneID:
112218660
NCBI-ProteinID:
XP_024235421
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Position
LG19:33408294..33440226
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AA seq
818 aa
AA seq
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MASLQNADPALREYILKHSLPQIFQALLTGLCVSCPESPLHFLERKIVSIQENRDTAEID
WHTCVDDPEQVAVTSLAGSMVHDIFGKRDDTLFLSHLFEKAYSCYRISLTNMCFKAWKRF
IWNKRKEARELTLKMETAERHYIQRGLRVALCKWVEWVQVCKRRQNDAMKKIQRVWNAIH
CKIVIGAWRYVVQDSKRTKEYFEKLENGLLEMSSKDSDVAIGEGHDGLSLLPCKLSIKVF
QRLDVGDLLKCAEVCRTWKAIAQTCSLWSRISFSVERDWITDRIVEQILQKYRPFVVHLN
MRGCTSLQWPSFKCISECRNLQELNLSECFNIKDEMVCMILEGCPTLLYLNLSFSYVANG
TLRELSRSCLNLQFLSLACCRRFTDKGLQYLASGKGCHKLIHLDLSGCTQISVEGFRYIA
AGCPLLQQIVFNDMPTLSDSCVLELASKCHSLSAISLWDTPHLSDSAFKAIAEVANLSKF
SVDGNSRMSDISWRALCRSSPGLTRLHAADCPRMTDSSLKSMGALKNLVYLNISHCSRVS
DMGLRYLTEGPSASKLRELNLSNCSRINDLAIMRVAQKCSKLNHLSVSYCDNLSNSGLEW
LSSCSSLLSLDISGCNIMDQGLIALGGNPGLKKLVASECVWITDIGIEKFCRQARGLEYI
DVSHCVALSDQAIKALSFYCRTIVTLRMPGCPKMTDLAVQYLTVGRHFLRELDVSGCVLL
TDRTPRFLQTGCPQLNTINMVYCRGISKQAALRLQPCVEKWEHSNDDAPYWFGYDSLGQL
LQPIGRPDKIQDTWEEEEPAPRNNKKRNLIKACGEDYE
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttacaaaatgctgacccggcgttgagggaatatatactgaagcattccttg
ccccaaatatttcaggcattattaacaggtttatgtgtgtcgtgtcctgaaagtccatta
cattttctggaaaggaagattgtgtctattcaggaaaaccgggacactgctgagattgat
tggcatacatgtgttgatgatccagaacaagtcgccgtgacctcactggcaggaagcatg
gtgcatgacatctttgggaaacgagatgatacactgtttctctcccatttgtttgagaag
gcctactcctgttacagaataagtttaacaaatatgtgcttcaaggcgtggaaaaggttc
atctggaataagcggaaggaggccagggagttgacgctgaagatggagacagctgagagg
cactacatacagaggggcctgagggtcgcactctgcaagtgggtggagtgggtacaggtc
tgcaagagaaggcagaacgatgccatgaagaagatccagcgagtgtggaatgctatccac
tgtaagattgtcataggtgcttggcgctatgtggtgcaggactcaaaacggacaaaggag
tactttgagaaactggagaatggtctgttggagatgagcagtaaggactctgacgttgcc
attggagagggacatgacggactctcactgctaccttgcaagctctcaataaaggtcttc
cagagactagacgtaggagacctgctgaaatgtgcagaagtgtgtcggacctggaaggcc
atcgctcagacctgctcactgtggagtcggatcagtttctctgtggagagggactggatc
acagaccgcatcgtggaacagatcctacagaagtaccggccatttgtagttcaccttaac
atgcgtggctgcacctctctacagtggcccagcttcaaatgtatcagtgaatgcagaaac
ctacaggagctgaacctttcagagtgtttcaacattaaagatgagatggtgtgtatgatt
ctagaaggctgccccactctgctctacctgaacctgtccttctcatatgtggccaatggg
actctcagagagctctccaggagctgtctgaacctgcagttcctgagtttagcatgctgc
cgtaggttcactgataaaggcttacagtacctggcctcagggaagggctgccacaagctc
atccaccttgacctctctggctgcactcagatctcagtggaaggtttcaggtacatagca
gcgggctgccctctgctccagcagatagtcttcaatgacatgcctactctgtcagacagc
tgtgtgctggagctggcctctaagtgtcactctctgtctgccatctccctatgggacacg
ccccatctctcagactccgccttcaaagccatcgctgaggtggccaacctctccaagttc
agtgttgatggtaacagtcgtatgtcagacatcagttggagggctctgtgtcgtagctct
ccaggccttacgagactccatgctgctgactgccctagaatgactgactccagcctaaag
tctatgggcgccctcaaaaacctggtctacctcaacatctcacactgcagcagggtgagt
gacatggggctgcggtacctgactgaggggccttctgcctctaaactgagggagctgaat
ctgagcaactgcagccgcatcaacgacttagctatcatgagggtggctcaaaagtgcagt
aagctgaaccacctgagtgtgtcttactgtgataacctgtctaattctggtctggagtgg
ctcagtagctgttcctctctcctctctctggacatcagtggctgcaacatcatggaccag
gggttgattgctctaggtgggaaccctggcctgaagaagctggttgcctctgagtgtgtc
tggatcactgacattggcatagagaagttctgcaggcaggcgagaggtctggagtatatt
gacgtgtctcactgtgtagctctatctgaccaggccatcaaggctctgtccttctactgc
aggactatagtcacgttacgcatgcctggctgcccaaagatgacagacctggcggtacag
tacctgacagtagggcgtcacttcctgagagagctggacgtgagtggctgtgttctgttg
actgatcgcacaccacgcttcctacagacaggctgcccacagctcaacaccatcaacatg
gtctactgcaggggaatatccaagcaggcggctctgaggctccagccctgtgttgagaag
tgggagcacagtaacgatgacgccccctactggttcggctatgacagtcttggccagctg
ctgcagccaattggacgacctgacaagatccaggatacctgggaggaagaggagccagca
ccaagaaacaacaaaaagaggaatttgataaaggcctgtggagaggactacgaatga
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