Oncorhynchus tshawytscha (Chinook salmon): 112218692
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Entry
112218692 CDS
T05605
Name
(RefSeq) cilia- and flagella-associated protein 44
KO
K24224
cilia- and flagella-associated protein 44
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112218692
Cilium and associated proteins [BR:
otw03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
112218692
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML
WD40
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
WD40_MABP1-WDR62_1st
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WDR55
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
112218692
NCBI-ProteinID:
XP_024235487
LinkDB
All DBs
Position
LG19:36477973..36499596
Genome browser
AA seq
1849 aa
AA seq
DB search
MKMDSSEKQPAEDNFQGDPTGKQKASGETESSNVQPPPENNTTSQSAGAQEAHTQAEDPS
QDKAQAPAASEQVQQQPGGSSDAVEEEEERMGMKKLSEDMYYNYDELYSRPVITADSEIP
ENLLHLTHSFGYDCGRRANLQLLDERTLAFVAGNQLIFLDVRTKEQRYLRSCSGGGIGTI
MAHPSNRYFAVAEKGDQPNIVIYEYPSLRPYRILRGGTGQAYSFVDFNHEGTLLASVGSA
PDYMLTLWEWRHEQVMLRCKAFSQDVYRVTFSPDNPGQLTTSGSGHIKFWKMASTFTGLK
LQGLLGRFGKTALTDIEGYVELPDGKVVSGSEWGNMLLWDGGLIKVEICRKGGRTCHAGT
IQQFALDEGELMTIGSDGAIRGWDFESIDTADCNDDSGLFEIEPMNEMVIGRNVSLSSMV
KSCLPDSFIWFAQDSNGGIWKLDLSFSNITQDPECLFSFHAGVIQGMDVSSTSHLMATTT
LDRSVRIFDFLAKKELTTSRYKQGGTTLTWAPRLVNPSGGLVVVGFEDGVVRLLELYNPQ
SLRVVAGRSRYGDAELRLKQAFKPHNAAVTAIAYERNGEILATGSMDCTVFFFTVGDRYD
PIGFVTVPGPVQGLEWSPQSHGKNTLLVLCRSGHVVEVQSPDPEAQNHGTTYHISGLPTR
NFTFSSIKSHIKREEEIARRQALKEKKQKEREAQLKKAKEEGLEPTEEELQEVEEEEELP
PLYTPDPPSPLCCGFYSLPGAFWLSMGGYDSGFLYHCKFSEQQGEDLLQRRDEPFTFLPV
QNTDEDPICTITFSSSRQLLLCGMQSGSVRAYPLQPPDFHLTSMQAFWALSVHDNQYGQL
RQLRCSFDDQFVLTTGEDGNIFSFSLLPQEDLLKVLQCSKAKVPSPRIGVEMEGVAQDIE
DPLAYSIETAKQKLEMDRMRREAEMRKVERRKMLAELQNQFKQLLEKNQGLPEHVRLHRT
ELELDRRFREETERMTAQRVREARKELAWEEERHRIGLQKLQERFWDSLESDTVTVVAFQ
SDHRISTYRLLALSQRFHELKQRGRVGGPGTVGQERWRNKAEAGKDSSNITADQEDLGEE
AVMAPHVVRPGGSKLAGRQAEKLRKATEKAERARVKIEKRRKEWAELYATKPNENCEDPE
DVRAIRLATENMGDFKLKTAKDFTVPEHLRMNAEKKRAQLVHLEEKIHERKTQMNSRIMA
LRDTKVSLVSRLRSQAQQLQAVQERLAPHFCSPAPTLPSLLPEETPETKLRYTRTTLQRY
GALRAQRACTRGQELEGGQTLLEQLEAEIEKQEETPCHTPADRREREVEESGVTELEEEM
REVEEIRLLYEEESLLEQMSSSMWQFDAELCLLRHEKLWLDIQMKLADLRHVTLFQELLL
LKEFEKRENSLQERLNACVEEEEDLRSKLEECKQALELKRRDISKLQERERAIAATFQAS
LGENNKFADFLTRVFKKKIKRVKKKEKAGDDEEQEDSDEDSDEESDWDEDEDDSGSESGG
PLDDSVCPPNCNSELFENTVQLRERRLDLEELLVEERKTADNLRKECDSLVKKEKVVHGS
LKAAEGDLELFNREKQQKLNELDVVVPLRLHQIEFVSNGVVPCSLAPALVLNTVALGGLQ
ERIKELQVEKSEQRDLYRQARQQHVQLIHDRKDMEAKIQSLEARCEQLMLMKFGKLVDLE
ALQTLSGNRNLEEMRQDSRVREAAYTQEVRQWEVKVTEARHAVTEVTRHHTERLLSMNSL
LSQKKEMEDKLNTRQSRMGTQFQGRRHAEEDERRRLYQLVQSQAQEANALRQEINILSRK
GGHILPPSQAPLPPLPEAPSRSTRTNPERLNRHFKLGGGHPSNSSQGVE
NT seq
5550 nt
NT seq
+upstream
nt +downstream
nt
atgaagatggactcttctgaaaaacaaccagctgaagacaattttcaaggtgaccccaca
ggaaagcaaaaagcttctggggaaacggaaagctcaaatgttcagccacctccagagaac
aacacaacttcccaatcagcaggtgcacaggaagcacatacacaagcagaggacccttca
caagacaaagctcaggctcctgcagcctctgagcaggtgcagcagcagccaggtgggagt
agtgatgctgtggaggaagaggaggagcgaatggggatgaagaaactctctgaggacatg
tactacaactatgacgagctgtactccagaccagtcatcactgcagactcggagatccca
gagaacctactgcaccttacgcactcttttgggtatgactgtgggcgcagggctaacctg
caactgctggatgagcgaacactggcctttgtggctggaaaccagctcatattcctggat
gttcggaccaaggagcaacgctacctccgctcctgcagtgggggaggcatcggcaccatc
atggcccaccccagtaataggtattttgctgtggcagagaagggagaccagcccaacatc
gtcatctatgagtatccctcactacgaccctaccgcattctcagaggtgggaccgggcag
gcttacagctttgtggactttaaccatgagggcaccctgctggccagtgtgggtagtgct
ccggactacatgctgaccctgtgggaatggagacatgaacaggtgatgctgcgctgcaag
gccttctcacaggacgtctacagggtcaccttttcacctgacaatcctgggcaactcacc
acctccggatctggacacatcaagttttggaaaatggccagcacttttactggtctcaaa
ctgcaagggcttctgggaaggtttgggaagactgccctgacggatatcgagggttatgtg
gagctgcctgatgggaaggtagtgtcggggtctgagtggggaaacatgctgctgtgggac
gggggcctgatcaaggtagagatatgccgtaaggggggcaggacgtgccacgctggcacc
atccagcagtttgctttggacgagggggagctcatgaccatcggctccgatggagccatt
aggggctgggactttgagagcattgacacagcagactgtaacgatgatagcggtctgttt
gagattgagcccatgaacgagatggtgattggacgcaacgtcagcctgtcctccatggtc
aaaagctgcctgccagactccttcatctggttcgcccaggattccaatggaggcatctgg
aaactggatctttcattttccaacattacccaggacccagagtgtctgttctccttccat
gctggagtgatccagggaatggatgtgtccagcactagccatctgatggccaccaccact
ttagaccgctcagtcaggatttttgacttccttgcaaagaaagaactaacaaccagccgc
tacaaacaaggtggaacaacactgacctgggcgccacgcctggtgaaccctagtggaggg
ctggtggtggtgggctttgaggacggggtggtccgtctgctggagctctacaacccccag
agtttacgagtggttgctgggcgcagtcgctatggagatgccgagctccgtctcaaacag
gccttcaaaccccacaatgcagctgtgacggccattgcatatgaacgtaacggcgagatc
ctagctactgggagtatggactgcactgtgttcttcttcactgtgggggacaggtatgac
cccattgggtttgtcacagtaccaggacctgtacagggtctggagtggtccccccagtca
catggcaaaaacaccctgctggtcctgtgtaggagcggtcatgtagtggaggtccagtct
ccagacccagaggcccagaaccacggcaccacctaccacatctctggcctccccacaaga
aacttcaccttcagcagcatcaagtcacacatcaagcgggaggaggagattgcgcgcagg
caggctctgaaggagaagaagcagaaggagagagaagcacagctgaagaaagccaaggag
gagggccttgagcccactgaggaggagctgcaggaggtagaggaggaggaagagctgccc
cctctttacacccctgacccccccagccccctctgctgtggcttctactctcttcctggg
gccttctggctctccatgggaggctatgattcggggttcctgtaccactgtaagttttca
gagcagcagggtgaggacctgttacagcgcagggatgagccgttcaccttcctgcctgtc
cagaatacagacgaggaccccatctgcaccatcaccttcagctccagcaggcagctgttg
ctgtgtggcatgcagtcaggcagtgtccgggcgtaccctctgcagccacctgacttccac
ctcacatccatgcaggccttctgggccctcagcgtccatgacaaccagtatggacagctg
cgccagctgcgctgtagctttgacgaccaatttgtcctgacgacaggggaggacggcaac
atcttctccttcagcctactgccccaggaggacctgcttaaagtcctgcagtgcagcaag
gccaaagtcccctcaccacggatcggcgttgaaatggagggtgtggcccaggatatcgaa
gacccgttggcgtacagcattgagacggctaagcagaagttggaaatggaccgtatgcgt
cgggaggctgagatgaggaaggtggagagacgtaagatgctggctgagctgcagaaccag
ttcaaacagctactggagaagaaccagggtctgcccgaacacgtccgcttgcaccgcacg
gagttggagctggaccggcggttccgtgaggagactgagaggatgacggcccagagggtg
agagaggccaggaaggagctggcctgggaggaggaacgccaccgcatcggactccagaaa
ctacaggagaggttctgggattctcttgagtcggacacagttactgtggtagcgttccag
agtgaccacaggatctccacctatcgtctgctggcactgtcccagaggttccacgagctg
aaacagaggggaagggtggggggcccggggacagtggggcaggaacgttggaggaacaaa
gccgaggccggcaaagacagttccaacatcacagcggaccaggaggacctgggtgaggag
gctgttatggcgccccatgtggtgcgtccagggggcagcaagctggctggccgccaggca
gagaaactccgcaaggctacggagaaggcagagcgggcccgggttaagatagagaagagg
aggaaagagtgggctgaactgtatgccacaaagcccaatgagaactgtgaggatccggaa
gatgtgcgagccatccgattggctacggagaacatgggtgacttcaagctgaagactgcc
aaagactttacggtcccagaacacctgaggatgaacgcagagaagaagagagctcagctg
gtccacttagaggagaagatccatgagaggaagacgcagatgaacagtcgcataatggcc
ttaagggacactaaggtgagcctcgtgtcacgcctgcgctcccaggcccagcagctacag
gctgtccaggagcgcctagcgcctcatttctgcagccctgcccccaccctgccctccctg
ctgcccgaggagacccctgagacgaagctacgctacacccgcaccaccctgcagcgctac
ggggccctgagggctcagagggcctgtactcgtggccaggaactagagggggggcagact
ctgctggaacagctggaggcagagatagaaaaacaggaggagaccccctgccatacacct
gcagataggagagagagggaggtggaggaatctggggtgaccgagctggaggaggagatg
agggaggtagaggagatcaggctgctgtatgaagaggaatccctgctggaacagatgtcg
tcgtcaatgtggcagtttgatgcagagctgtgcctgctgcgtcatgagaagctgtggcta
gacatccagatgaagctggctgacctgcgccatgtcaccctgttccaggagctgctgctg
ctcaaagagtttgagaagagagagaactccttgcaggagagactaaatgcctgcgtggaa
gaagaggaagacctcaggtctaagttggaggagtgtaagcaggcactggagctgaagcgg
agggacatctccaagctccaggagagagagagggccatagctgccaccttccaggcctct
ctaggggagaacaacaagtttgctgacttcctcaccagggtcttcaagaagaagatcaaa
cgcgtcaagaagaaagaaaaggctggagatgacgaggagcaggaggacagtgatgaagat
tctgatgaagagtctgactgggatgaggatgaggatgacagtggctcagagagcggtggt
cctctggatgacagcgtctgccccccaaactgtaactcagagctgtttgagaacacggtg
cagctccgtgagcgtcgtctggacctcgaggagctgctggtggaggagaggaagactgca
gacaacctgaggaaggagtgtgactccctcgtcaagaaggaaaaagtggttcatggcagt
ctgaaagcagcagagggagacctggagctgttcaacagagagaaacaacagaagctcaat
gagctggatgtggtggttcccctcagactgcaccagatagagtttgtgagcaatggggtg
gtaccgtgcagcctggccccagcactggtgctgaacacagtggcattgggaggactacag
gagaggattaaagaactgcaggtggagaagagtgaacagagagacctctacagacaggcc
aggcagcagcacgtccagctcattcacgaccgcaaggacatggaggccaagatacagagt
ctggaggcgcgctgtgagcagctgatgctgatgaagtttgggaagctagtggacctggaa
gccttacagactctgtctggcaacagaaacctggaggagatgagacaggatagcagagtc
cgagaggccgcttacacacaggaggtcagacagtgggaggtgaaagtgacagaggcccgt
catgcggtgacagaggtgacaaggcatcacaccgagcgtctcctcagtatgaacagcctg
ctgagccagaagaaagaaatggaggacaaactcaacaccaggcagagcaggatgggtacc
cagttccagggccgtcggcatgctgaggaggacgagaggcggaggctgtaccagctggtc
cagagtcaagctcaggaggcaaacgccctccgccaggagatcaacatcctgtccagaaag
gggggtcacatcctgccccccagccaggccccattgccccccctgcccgaagccccatcc
cgctccacccgtaccaacccagagaggctcaacagacacttcaaactgggaggggggcat
ccatccaacagcagccagggggtggaatag
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integrated database retrieval system
