Oncorhynchus tshawytscha (Chinook salmon): 112218749
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Entry
112218749 CDS
T05605
Name
(RefSeq) SLIT-ROBO Rho GTPase-activating protein 1 isoform X1
KO
K07526
SLIT-ROBO Rho GTPase activating protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112218749
Membrane trafficking [BR:
otw04131
]
Endocytosis
Bin/Amphiphysin/Rvs (BAR) family proteins
F-BAR proteins
112218749
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112218749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
FCH
SH3_1
SH3_9
SH3_2
Motif
Other DBs
NCBI-GeneID:
112218749
NCBI-ProteinID:
XP_042157578
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All DBs
Position
LG19:39224620..39376885
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AA seq
1110 aa
AA seq
DB search
MSNTKFKKDKEIIADYESQVKEIRAQLVEQQKCLDQQTEMRVQLLQDLQDFFRKKSEIEM
EYSRNLEKLAERFMAKTRSTKDHQQYKKDQNLLSPVNCWYLLLNQVRRESKDHATLSDIY
LNNVIMRFMQISEDSTRLLKKSKEITFQLQEDLMKVLNELYTVMKTYHMYHTESISAESK
LKEAEKQEEKQIGRAEPVFSYRLEDKHQRRSSVKKIEKMKEKRQAKYSENKLKSIKARNE
YLLTLEATNSSVFKYYIHDLSDLIDCCDLGYHASLNRALRTYLSAEYNLETSRHEGLDII
ENAVDSLDPRSDRQRFMELYPTAFCPPIKFQFQPHMGDEVCQIAMQPPVSGELMLRFQQL
QSRLATLNIENEEIKKTSEATLTTIQDMVTIEDYDVSECFHHSRSTESVKSTVSETYLSK
PSIAKRRANQQETEQFYFMKFREFLEGSNLISKLQAKHDLLKRTLGEGHQGDYMTTRPPN
VPPKPHSGTNRRARPRSVFNVKLFNGNLESFVKDSGQAIPRVVESCVRFINLYGLQHQGI
FRVSGSQMEINDIKNSFERGKDPLTDEENNHDINSVAGVLKLYFRGLEKSLLPKERFNDL
LSCVRIENLYERSLYIRKILLTAVPRSILIVMRYLFAFLNHLSQYSDENMMDPYNLAICF
GPTLMPTPNIEDQVLCQAHVNEIIKTIIIHHETIFPDTKELDGPVYEKCMAGEDYCESPY
SEHGAIEEVDNEGGTETHTSEDEGEPIEAIAKFDYVGRSARELCFKKGASLLLYQRASDD
WWEGRHNGIDGLVPHQYIVVQDMDDNFSDTLSQKADSEASSGHGAEDKCSGKDMSSPTDT
RITDAYIGSRHKKRTEPPSRRPPARPNDVNCMVHPSQQTHGGQAHTPEMGSPVLGHSFSP
RDLLRSRNHGQLPMDSPEHRRRTGHGSLTNISRHESLKKMESPPIRRSTSSGQYTAVFQD
PHPHGGGKPLDPETIAQDIEETMNTALNELRELERQSSAKHAPDVVLDTLEQRQSTGGPT
PASSSESLSPLHNILLRAQTGEAGGPPMRRSTSSSSDTMSTFKPVVVPRMGVQLKPPALR
PKPLVLPKTGPAHPPPVHPPQDPLDKSCTM
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatacaaagttcaaaaaggataaggaaatcattgctgattacgagagtcaagtt
aaagagatccgtgcccagctggtggagcagcagaaatgcctggaccagcagacagagatg
agggtgcagctcctccaggacctgcaggacttcttcaggaagaagtccgagattgagatg
gagtactccaggaacctggagaaactggcagagaggttcatggctaagactcggagcacc
aaggaccaccagcagtacaagaaggaccagaacctgctgtccccggttaactgctggtac
ctgttgctgaaccaggtgaggagggagagcaaggaccacgccaccctcagtgacatctac
ctgaacaacgtcatcatgcgcttcatgcaaatcagcgaggactccacacgcctgctcaag
aagagtaaggagataacgtttcagcttcaggaagacttgatgaaggtcctcaacgagctt
tacactgtgatgaagacttaccacatgtaccacacggagagcattagtgcagagagcaag
ctgaaggaggcggagaagcaggaggagaagcagatcggccgggccgagcccgtcttcagc
taccgcctggaagacaagcaccagagacgcagctccgtcaagaagattgagaagatgaag
gaaaagcgccaggccaagtactcggagaacaagctgaagtcaatcaaagcacggaacgag
tacctgctgacactggaggcgacaaattcctccgtcttcaagtactacatccacgacttg
tctgacttaattgactgctgtgatctgggctaccacgccagcctgaaccgtgccctgagg
acctacctatcggctgagtacaacctggagacaagtcgccacgagggcctagacatcatc
gagaacgccgtggacagtctggacccccgcagcgaccgccagcgcttcatggagttgtac
cccacagccttctgcccgcccatcaagttccagttccagccccacatgggcgatgaggtg
tgccagatcgcgatgcagccgccggtgagtggagagctgatgttgaggttccagcaacta
cagtcccgcctggccactctgaacatcgagaacgaggagatcaagaagacgtcagaggcc
accctgacgaccatccaggacatggtgaccatcgaggactacgacgtctctgagtgtttc
caccacagccgctccaccgagtcggtgaagtccactgtgtcggagacctacctcagcaag
cccagcatcgccaaacggagggccaaccagcaggagacggagcaattctacttcatgaaa
ttccgtgagtttctggagggcagcaatctcatctccaaactgcaggccaagcacgaccta
ctgaagaggactctgggagaaggtcaccaaggggactatatgaccacaaggcctcccaat
gtgccgcccaaacctcacagtggcacaaataggagggctaggccccgctcggtctttaac
gttaagttgtttaatggcaatctggagtcctttgtcaaggactctggacaagctattccc
cgtgtggtggagagctgtgttcgattcatcaatctctatggccttcagcatcaagggata
ttccgtgtgtccgggtctcagatggaaatcaatgacatcaagaactcattcgagagaggt
aaggacccattgacagatgaagagaacaaccacgacatcaactcggttgccggggttctt
aaactctacttccggggcctggagaaatccctcttgcccaaggaaagatttaatgacctc
ctctcctgcgtcagaatagagaacctgtatgagaggtccctgtacatccgtaagattctc
ctgaccgccgtgcccagatccatcctcatcgtgatgcgctacctttttgcctttctcaat
cacctgtcccagtacagcgatgagaacatgatggacccctataacctggccatctgcttc
gggcccaccctcatgcccacacccaacatcgaggaccaggtgttgtgccaggcacacgtc
aacgagatcatcaagaccatcatcatccaccacgaaaccatcttccccgacaccaaggag
ctggatgggcccgtctatgagaaatgcatggccggggaagactactgtgagagtccctac
agtgagcatggggccatagaggaggtggacaatgagggaggcactgagacgcataccagt
gaggatgagggcgagcccatcgaagcaattgccaagtttgactacgtgggacgttctgcc
cgagagctgtgcttcaagaagggcgcctccctgctgctgtaccagcgggcatcggacgac
tggtgggagggacggcacaacggcattgacggcctggtacctcaccagtacatcgtggtg
caggacatggatgataatttctcagacacgcttagtcagaaggctgacagtgaggccagc
agcggccatggagctgaggacaagtgttcaggaaaagacatgagctctcctactgacacc
aggatcactgacgcctacattggcagcaggcataagaagaggacggagcccccctcccgc
cgccccccggcacgccctaatgatgtcaactgcatggtgcacccctcccagcagacccac
ggtggccaggctcacacgcctgagatgggctccccggttctgggtcactccttcagcccc
cgggacctgctgcggagccgtaaccacggccagcttcccatggacagccctgagcaccgg
cgccgaacaggccacggcagcctgaccaacatcagccgccacgagtcactgaagaagatg
gagagcccgcccattcgacgctccacaagctcgggccagtacacggccgtgttccaggac
ccccacccgcacggtggtggcaagcccctggatccggagaccattgcacaggacatagag
gagacgatgaacacggcgctgaacgagctgcgtgagctggagaggcagagttcggccaag
cacgctcccgatgttgtgctggacaccctggagcagaggcagtcgaccgggggtcccacc
ccagccagctccagcgagtccctcagccccctccacaacatccttctgagggctcagacc
ggcgaggccggggggcccccgatgcgccgcagcaccagctcttccagcgacaccatgagc
accttcaagccggtagtggtaccccgtatgggggtgcagcttaagccgcctgccctgagg
cccaagcccctggtgctgcccaagacgggcccggctcaccctccccctgtacaccctccc
caagaccccctagacaagtcgtgcaccatgtga
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