Oncorhynchus tshawytscha (Chinook salmon): 112218762
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Entry
112218762 CDS
T05605
Name
(RefSeq) protein bicaudal D homolog 1-like isoform X2
KO
K18739
protein bicaudal D
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
112218762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112218762
04131 Membrane trafficking [BR:
otw04131
]
112218762
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
112218762
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
112218762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BicD
DUF5798
ApoO
Motif
Other DBs
NCBI-GeneID:
112218762
NCBI-ProteinID:
XP_024235646
LinkDB
All DBs
Position
LG19:40868896..40948509
Genome browser
AA seq
1022 aa
AA seq
DB search
MAAGGGCGETVDQYRAKVERLTQELAEANREKIRAAECGLVVLDENQTLKHQYADLESEQ
ETLKQELEQLQEAFGQAYSNQRKVAEDGEINEESLLQESASKEAFYMGQLLELQTDLKLS
RSVASNASNESERLNAVLQEHKESNEMLELQGSRMREEIREYKFRDARLLQDYTELEEEN
ITLQKLVSTLKQNQVEYEGLKHEIKVLEEETVLLNSQLEDAVRLKDISQSQLEEALDALK
IEREQKNSLRKELAHHITLSDSVYGAGAHLALTATVDGLKFATEEVGSNGTAMHNGANGS
EDSNGHCNGHLGLAKMNGDYRLPRKGEGLHGPVSDLFSELNLSEMQKVKKQLFQVEREKS
SLLMNLQESQTQLQHMQSALTEQHENVQRLTERVNVMKHLQSDKEMADSQESEKSNGLPS
PCHRDDEVDIHRMDILECKYKVAVTEVIDLKAELKALKENYNQCVEGQGEERSSNDGKVQ
ALDEQVNRLEQSCHDSHDRVECLEAELKTATDVASESHSMLNTAQDELVTFSEELAQLYH
HVCLCNNETPNRVMLDYYRQSRNTRSGSLKGSEDPRALLSPRLARRLAAINAGFTEAPRS
PIDSPYKESPSGDNGETGRESPAPGSQGSPTRSLMGSPVINGTNGPSSSSPVPPEASGDL
RKEPMNIYNLNAIIRDQIKHLQRAVDRSLQLSRQRAAARELAPLFDKDKEACMEEILKLK
SLLSTKREQIATLRLVLKANKQTAEVALANLKSKYENEKCMVTETMMKLRNELKALKEDA
ATFSSLRAMFATRCDEYVTQLDEMQRQLAAAEDEKKTLNSLLRMAIQQKLALTQRLEDLE
FDHEQTRDRGRGTKVPKIKNSPPKVSRRAALTAPPSPTMIHSPSSTSSHSFNTSLTLCSP
PSLELPLSSNPWSASDRGSSQFSSLPPLGDPQWSLGTQTFIIDPESLSLEFCRLVNSRDS
GLHSPSSAPASPYRSPIPKTWQHLSPGSVRTRTQKDAPRPSALATSPSNPVPRSYSSQMS
QP
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atggctgccggtggaggatgcggggagactgtggatcagtaccgggcgaaggtggagcgg
cttacccaggaacttgcggaagcgaacagagagaagataagggcggcagaatgcggtctt
gttgtgttggatgagaaccagactctaaagcaccagtatgccgatctggaatcggaacag
gagacgctgaagcaagagttggaacaattacaagaggcgtttggccaggcatactccaac
cagcgtaaggtcgcggaggatggcgagatcaacgaggagtcgctgctgcaggagtcagcg
tcaaaggaggccttctacatgggccagctgctggagctgcagacggatctgaagctgagc
cgctccgtggcgtccaacgcgtccaacgagagcgagaggctcaacgccgtgcttcaggag
cacaaagagagtaatgagatgctggagctgcaggggagcaggatgagagaggaaatcagg
gagtataaattcagagatgcgcgactcctacaggattacactgagctggaggaggagaac
atcaccctgcaaaaactagtctccaccctcaaacagaaccaggtggagtatgagggtctg
aagcatgagatcaaggttctggaggaggagacggtgctgctgaacagccagctggaggat
gctgtgcgtctgaaggacatctctcagtcccagctggaggaggctctggacgccctgaaa
attgagagggagcagaagaacagcctgaggaaggagctagcccaccacatcaccctcagc
gacagtgtgtatggtgccggagcccacctggctctcaccgccactgttgacgggctcaaa
tttgccaccgaagaggtcgggagtaatggtacagccatgcataatggagccaacgggagt
gaggatagcaacggccactgtaatgggcacctgggattggctaagatgaacggcgactac
cggctgcccaggaagggggaggggctgcatggtcctgtgtctgacctcttcagcgagctc
aacctgtctgagatgcagaaagtaaaaaagcagctgtttcaggtggagcgtgagaagtca
agcctcctgatgaacctgcaggagtcccagacccagctgcagcacatgcagagcgccctg
acggagcaacacgagaacgtccaacgcctcaccgaacgcgtcaacgtcatgaagcacctt
caaagtgacaaggagatggctgattctcaggagtctgagaagtccaacgggttgccctcg
ccctgtcaccgcgacgacgaggtggacatccacaggatggacatcctggagtgtaagtac
aaggtggcagtaaccgaggtgatcgacctgaaggcggagctaaaagccttgaaggagaac
tataaccagtgtgtggagggccagggggaggagcggagcagcaacgatgggaaggtccag
gctctggacgagcaggtcaaccggctggagcagagctgccacgattcccacgatagggtg
gagtgtttggaggcagaactaaagacggcgacggatgtggcctcagagagccacagcatg
ctgaacacagcgcaggacgagctggtaacattcagcgaggagctggcccagctctaccac
catgtgtgtctctgcaacaatgagacgcccaaccgcgtcatgctagactactaccgccag
agccgtaacacccgcagcggcagcctcaagggctccgaggacccccgggcactcctctct
ccccgcctggctagacgcctcgccgctatcaacgctgggttcaccgaggccccacggagc
cccatagactcgccttacaaagaatcccccagtggggacaatggggaaacagggagggag
tccccagcaccaggcagccaggggagcccaacccgttccctcatgggctccccggtcatc
aacggcaccaacggcccttcctcctcctcccccgtgcctcccgaggcaagtggagatctg
cgtaaggagcccatgaacatctacaacctgaacgccatcatcagggaccagatcaaacac
ctgcagagagccgtggaccgctccctccaactgtctcgacagagggcagctgcccgggag
ctggcccccttgttcgacaaggacaaggaggcctgcatggaggaaatcctcaagctcaag
tccctcctcagcaccaagagggagcagattgctacgctaagactggtgctcaaagccaac
aaacagactgcagaggtggcgctggctaatctaaagagcaagtatgagaatgagaagtgc
atggtgacagagaccatgatgaagctgaggaacgagctgaaggctctgaaggaggacgct
gccaccttctcctctctcagggccatgttcgccaccaggtgtgatgagtacgtgactcag
ctggatgagatgcagagacagctggcagcggcggaggatgagaagaagaccctgaactcc
ctgctccgcatggccatccagcagaagctggccttgacccaacgcctggaggacctggag
tttgaccacgaacagaccagggaccgcggccgcggcacaaaggtgcccaagatcaagaac
agccctcccaaagtaagtcgacgagccgctctcactgctccccccagccctaccatgata
cacagcccttcctccaccagctcccactccttcaacacctccctgaccctctgcagccct
ccctccctggagctgcccctgtcctccaacccctggtcggcctcagacagaggctcatcc
cagttctcttccttgcctcccctgggtgacccccaatggtccctaggcactcagaccttc
atcattgacccagagtcgctgagtttagagttctgtcgactcgttaacagtcgagactct
ggtctgcactctcctagctccgcccctgcgtctccctaccgctcacccattcccaagact
tggcaacacttgtcgccggggtcggtgagaactcgtacccaaaaagacgcacctcggccc
tctgctctggccacatctcccagcaaccctgtccctcgctcctacagttcccagatgtcc
cagccctga
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