Oncorhynchus tshawytscha (Chinook salmon): 112218793
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Entry
112218793 CDS
T05605
Name
(RefSeq) transcription factor E2F4
KO
K04682
transcription factor E2F4/5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04110
Cell cycle
otw04218
Cellular senescence
otw04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
112218793
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
112218793
04218 Cellular senescence
112218793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112218793
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, E2F
112218793
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GFIT
Motif
Pfam:
E2F_CC-MB
E2F_TDP
HTH_Cmi2_C
Motif
Other DBs
NCBI-GeneID:
112218793
NCBI-ProteinID:
XP_024235716
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Position
LG19:41867226..41875943
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AA seq
396 aa
AA seq
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MELESERTEFGAMGDSLQPQTPSRHEKSLGLLTTKFVSLLQEAKDGVLDLKAAADTLAVR
QKRRIYDITNVLEGIGLIEKKSKNSIQWKGVGPGCNTQEIADKLIDLKAELDDLDKREHE
LDQQRVWVQQSIMNVTDDSQNSPMAYVKHEDLCSAFKGDTLLAIRAPTGTQLEVPIPESV
LIGQKKYQIRLKSSAGPIEVLLVNKDPSSPSPVVLSVPPPEDMLQSLPVPAAANTKPTPT
APSQPSQPLAHSSNPSPATLLPACTATSNQAVTTAVSSTPTVSTPTTNTNAQSTPLLDTQ
PLQSSASLDGCCSSSAVFEPIKADPSELLYFPKELSDMFDPTKEIMSADLLEELMSSEVF
SPLLRLSPPPGDHDYIYNLDETEGLCDLFDVPILNL
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggagctggagtcggaaagaaccgaatttggagctatgggtgactcgcttcaacctcaa
accccaagtcgacacgagaagagtctaggattgcttacaaccaaatttgtatctttgcta
caagaggccaaggatggagttctagacctgaaagcagcagcagacaccctagctgtgaga
cagaagcggcgcatctacgacatcaccaatgtgcttgagggcatcggactgatcgagaag
aagtctaagaacagtattcagtggaagggtgttggtcctggctgtaacacacaggagata
gccgataaactcattgatctgaaggcagaactggatgatctggacaagcgggagcacgag
ttggatcaacagagggtctgggtccagcagagcatcatgaacgtcacagacgactcacag
aacagccctatggcttatgtaaaacacgaagacctctgtagtgctttcaaaggtgacact
ctcctagcgatccgcgctcccacaggcacacaactggaggtgcccatacctgagtcggta
ctgattggacagaagaagtatcagatccgtctcaagagctcagcaggacccattgaggtt
ctccttgtgaacaaggacccatccagcccgtctccagtggtactgtccgtccccccaccc
gaggacatgctccagagccttccagtgcctgctgctgccaacacaaaaccgacacctact
gccccctcacagcccagccagcctctggcccactcctccaaccctagtcctgccacactc
ttacctgcctgcacagctacttctaatcaggcagtcaccactgcagtgtccagcacaccg
actgtttccacacccactacaaacacaaatgcccaatcgactcccctgttggacacccag
cctctccagtcctctgcctcattggatggctgctgttcttcttcagcagtctttgaacca
atcaaggctgacccctcagaattgctgtatttccccaaagaactttcagacatgtttgac
ccgactaaagagatcatgagtgcagacctgttggaggagttgatgtcttccgaggtgttc
tctccactcctccgtctatcaccccctccgggtgaccacgactacatatataacctggac
gaaaccgaaggcctgtgtgacctctttgatgttccgattcttaacctttga
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