Oncorhynchus tshawytscha (Chinook salmon): 112218801
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Entry
112218801 CDS
T05605
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112218801
Transcription factors [BR:
otw03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
112218801
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
PAS_2
bHLH_INO2
bHLH_NCOA
bHLH_NPAS4
PAS_8
AARP2CN
Motif
Other DBs
NCBI-GeneID:
112218801
NCBI-ProteinID:
XP_024235729
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Position
LG19:complement(42394083..42430172)
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AA seq
632 aa
AA seq
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MNICDYLMADQRMDITSTMNEFMSPSSTELISSSINTQSMDYTRKRKGSTSDYQIDGFSF
DESSMDTDKDKLRDCGDHQGRIKNAREAHSQIEKRRRDKMNSFIDELAALVPTCNAMSRK
LDKLTVLRMAVQHMKTLRGAANPYTEANYKPSFLSDDELKHLILRAADGFLFVVGCDRGK
ILFVSESVYKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPV
KTDITPGPSRLCSGARRSFFCRMKCNRPYVKTEDKDFPSTCSKKKADRKSFCTIHSTGYL
KSWPPNKMGLDDDNEPDNEGCNLSCLVAIGRLHPHIIPQPSHEDIRVKPTEYVSRHAIDG
KFVFVDQRATAILAYLPQELLGTSFYEYFHQDDIGHLAECHRQVLQMREKINTNCYKFKI
KDGSFITLRSCWFSFMNPWTKEVEYIVSTNTVVSCSMLDGADLYPQSAASPTASMDSVLT
SEGGGRQAIQTVPGIPGGTRAGAGKIGRMIAEEVMEIQRTRGSTPSSCGSSPLNISTPPP
DCSPGSKRIQNGGTPDLPSAGTLPGGPDSIGYPYSNQSIMSDNSHLSIDIMDEPGSSSPS
NDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgaacatttgtgattatctaatggcagaccaaagaatggacattacctctacgatgaat
gagttcatgtcccccagctccaccgagctgatcagcagctccatcaacacccaaagcatg
gactacacccgcaagaggaagggcagcacctccgactaccaaattgatggattttctttt
gacgagagcagtatggatacagacaaggataagcttagggattgtggtgatcatcagggg
cggatcaaaaatgccagggaggcacacagtcagattgagaagaggcgcagagacaagatg
aacagctttatagacgagctggcagcgctagtgcctacttgcaacgctatgtctcgcaag
ctggacaaactcacagttctacgcatggctgttcagcatatgaagacattacgaggcgca
gcgaacccatacacagaggcgaactacaagccttctttcctgtccgatgatgaattgaag
cacttaatattgagggctgctgatggctttctgtttgtcgtcggatgcgatcgtgggaag
atcctcttcgtctctgagtctgtttacaagatcctcaactatagccagaacgacctaatt
ggccagagtctgtttgattacctgcatcctaaagacatcgccaaagtcaaggagcaactg
tcgtcatcggatacagcaccccgggagcgactcatcgacgccaaaactggcctgccagtg
aagactgacattacccctgggccgtctagactgtgctccggagccagacgttctttcttc
tgccggatgaaatgtaaccggccctacgtcaaaacggaggacaaggacttcccctccacc
tgctcaaaaaagaaagccgaccgcaagagcttctgcacgatccacagtactggctacctg
aagagctggccacccaacaagatgggtttggacgatgacaacgagcccgacaacgagggc
tgtaacctcagctgcctggtggccatcggccggctgcacccccacatcatcccccagccc
tcccatgaggacatccgcgtcaaacccaccgaatacgtctcccgccacgccatcgacggg
aagttcgtctttgttgaccagagggccacagccattcttgcgtacttaccccaggagctt
ctaggcacctccttctatgagtattttcatcaggatgatattggccacctggcagaatgt
cacagacaagtgctgcaaatgagagaaaagatcaacacaaactgttacaagttcaagatt
aaagatggctccttcatcacgctgagaagctgctggtttagtttcatgaatccctggact
aaagaggtggagtacattgtctccacaaacacagtggtctcatgcagtatgctagacggt
gcagacctctatcctcagtctgctgcttcccccacagcctctatggacagtgtgctgacg
tcagaaggtggagggagacaggctattcagacagtgccaggcatccctggcggaacacgg
gcaggtgccggcaagatcggccgtatgatcgcagaggaggtgatggagattcagaggacc
agaggctcaacaccttctagctgtggctccagccccctgaacatcagcaccccccctcca
gactgctctccagggagcaagaggattcaaaatggtgggacaccagaccttccgtcggca
ggaacgctaccaggaggacctgactccattggatacccatactccaaccagtccattatg
agtgacaactctcatctcagcattgacatcatggacgagccaggctccagcagccccagt
aacgatgaggcagccatggctgtgatcatgagtctcctggaggctgacgcaggccttggg
ggccccgtggactttagtgacttaccctggcccttgtga
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