Oncorhynchus tshawytscha (Chinook salmon): 112218821
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Entry
112218821 CDS
T05605
Symbol
nfatc3b
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 3
KO
K17333
nuclear factor of activated T-cells, cytoplasmic 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04010
MAPK signaling pathway
otw04020
Calcium signaling pathway
otw04148
Efferocytosis
otw04218
Cellular senescence
otw04310
Wnt signaling pathway
otw04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112218821 (nfatc3b)
04310 Wnt signaling pathway
112218821 (nfatc3b)
04020 Calcium signaling pathway
112218821 (nfatc3b)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
112218821 (nfatc3b)
09143 Cell growth and death
04218 Cellular senescence
112218821 (nfatc3b)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
112218821 (nfatc3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112218821 (nfatc3b)
Transcription factors [BR:
otw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
112218821 (nfatc3b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
112218821
NCBI-ProteinID:
XP_024235782
UniProt:
A0A8C8IQ73
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Position
LG19:complement(44562687..44590265)
Genome browser
AA seq
1059 aa
AA seq
DB search
MSTVNFSGNEELDFRLIFGEEAQQQLGPVAGPDPDDSTQYYTTQPIGQAQDVQQSHQRHP
AVSNQAPLQAHGNYHPSSSYEDHGSRYSATGHIPKAFDCPSIQITSISHQELVSSQDAVL
ISGADGGGECSHERSSSTDHLYLSLDPCYRDSSSLNPSPCSSLSSRSWLSDMSSCESFSH
VYDDVEAELNEAAARFTLGSPLASPLASPVCSPQGQAAGGFGVELWQQQYFMSTYSLSPR
QSPRGSPHQSPRQSPRQSPCHSPRNSVTDENWLNLRPTSRSSSRPTSPCGKRRHSSADVH
LASPSPSPHHSPSPTPGHSPRGSVTEDTWVVGSPGAMGALLYSFPEVDVPSKTRRTSHHM
GLLQAQGDSGQRLEDHRAALPNLDSPAEESGSNLKQDGLFEELFLSVPSHFTWSKPKLGN
TPLFRTSSLPPLDWPLPSQFGQCELKVDVQPRGHHRAHYETEGSRGAIKAASGGHPLVKL
IGYSEKPVNLQIFIGTADDRYLRPHAFYQVHRVTGKTVATACQESVISSTKVLEIPLLPE
NNMSSSIDCAGILKLRNSDIELRKGETDIGRKNTRVRVAFRVYIPQPSGKVMCLQAASIP
VECSQRSATDLPQMESCSPVSCLVSGGEEMVITGSNISPESKVIFLEKSPDGHTQWEVDG
KVIGEKSKISRIVVEIPTYHNTTVSSAVQVQFYVCNGKRRRSQTQNFTYLAGASPHHYPT
AIDCAVVATRLKQEHGDSAYLSTCTNPPGLYPTSSLLTSPDGAFSQDKPLYGSSGGHPVP
CDPPSQAAYTPSGSSPLQHSPHLHSYSPRMGYQQISLVHTPDPMPPIRTRPVYQVTQHNV
PYSGQASSPMRPGPAAPQVNRPQSAQTRPAASSPHREMYQSLIGPDLSGTTLQSAGNHTQ
NTTQLHSLSYHCSQSDSDLAALQAEYNLSYHSARNLPASYSPTPGAQATCSTSPSASASS
GGPLRQLSPSRAQGLASSSDPQECPPAPHFHFSNDQGKVNIKQEPEEKLPLGNMGLQEIT
LDDVNEIIDRDISQLIGGSAAESSQPGQDPYEWDSVILQ
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgagtactgtaaattttagcggcaatgaggagctggacttcagacttattttcggggag
gaggcgcaacaacagctaggccccgtagctggtccagaccctgatgacagcacgcaatac
tacaccacccagcctattggccaggcccaggacgtacaacagagtcaccagcgccatcca
gctgtctctaaccaggcgcctctgcaggcccatggtaactaccaccctagctccagctat
gaagatcacggttccagatacagtgccactggacacatccccaaggcatttgactgccca
agcatccaaatcacatccattagtcaccaagagctggtctccagccaggatgccgtgctc
atcagcggggcagatggcgggggggagtgcagccacgagcgttcctcgtccacggaccac
ctctacctgtccctggacccctgttacagggactcatcctccctgaaccccagcccctgc
agcagcctgtcctccaggagctggctgtctgacatgtcttcctgcgagtccttctcccat
gtgtatgacgatgtggaggctgagctaaacgaggcggccgcccgcttcaccctgggctcc
ccgctggcctctcccctggcctcccctgtctgctcgccacagggccaggccgcaggggga
tttggggtagagctgtggcagcagcagtacttcatgagcacctactcactctcgccccga
cagtcccctcgcgggtccccccaccagtcccctcgccaatcgccccgccagtcgccctgt
cactccccgcgcaacagcgtcacagatgagaactggctgaacctgcgtcccacctccagg
tctagctcaagacccacatccccttgtgggaaaagaaggcactccagtgccgacgtccac
ttagcctccccctccccctcgccacaccactcccccagccccacaccgggccactctccc
aggggcagtgtgacagaggatacctgggtggttggaagccctggtgccatgggggccctc
ctgtacagcttccctgaggtagacgttccgtccaagaccaggaggacctctcatcacatg
ggtctattgcaagcacagggagattccgggcagaggctggaagaccacagagcggctttg
cctaacctggattcacctgcagaggagtctgggtctaatctaaaacaggatggtcttttt
gaagaactttttctctcggttccctcacacttcacctggagcaaacccaaacttggcaac
acaccccttttcagaacctcgtccctgccccctctggactggcccctgcccagccagttt
ggccagtgtgagctgaaggtggatgtgcagccgcggggccaccacagggcccactatgag
acagagggcagtcggggggccatcaaggctgcctcaggtggacaccctttagtcaagctc
attggatacagcgagaagccagtcaacctgcagattttcattggaacggcagacgatcgc
tacttgagaccgcatgccttctaccaggtgcacagagtaacagggaaaacggtggctact
gcttgccaggaaagtgtaataagcagtacaaaggttctggaaatacctctgctccccgaa
aacaatatgtccagcagtattgactgtgcaggcatcttgaagctgaggaactctgacatt
gagctcaggaagggggagacagacatcgggaggaagaacacgcgtgtgcgagtggcattc
cgtgtgtatatccctcagcccagtggaaaggtcatgtgtctgcaagctgcctctattcct
gtggagtgctcccagcgctcggccacagaccttccccagatggagagctgcagtcccgtc
agctgcttggtcagtgggggggaggagatggtcatcaccggctccaacatatccccagag
tcaaaggtcatcttcctggagaaaagccctgatggacacacacaatgggaagttgatgga
aaagttattggtgaaaagagtaaaatatccagaatcgtggttgagattcctacctaccac
aacacaactgtgagctctgcagtccaggtgcagttctatgtgtgtaacgggaagaggaga
agaagccagacacaaaacttcacatacttggctggtgcttctccacaccattatcccact
gccattgactgtgcagttgtggctactcggctgaagcaagagcacggagactcagcctat
ctgtctacctgcaccaatccccctggcctatatccaaccagcagcctgctgacttctcct
gacggggccttctctcaggacaagcccttgtatggttcctctggtggtcacccagtgcct
tgtgatccaccctcccaggcagcatacactccctctggctcctcgcctcttcagcactcc
cctcacctccacagctacagcccccgtatgggataccagcagataagccttgtgcataca
cctgaccccatgccacccattcggacaaggcctgtctatcaggtcacacaacacaatgtg
ccttacagtggccaggccagctctcccatgagacctggccctgccgcaccccaggtcaat
cgacctcagtctgcccagaccagaccagctgcctccagccctcacagggaaatgtaccag
agcctcattggacctgatctctctggcaccactctccagtctgcgggaaaccacacccag
aatacaacacagctgcactctctaagctaccactgctcccaatcagactctgatctggca
gccctacaggctgagtataatctgagctatcactctgcaagaaacttgcctgcctcgtat
tcccccacccctggagcacaagcaacctgctccacctccccgtcagcatcagcctcctct
gggggtcctctgaggcaactgtcccccagcagagcccagggcctggcctctagtagtgac
ccccaggagtgtcccccggccccccatttccatttctcaaatgaccaagggaaagtgaac
atcaagcaggaaccagaggagaagctgcctctcggcaacatggggctccaggagatcaca
ctggatgatgtgaatgagatcatcgacagagacatatctcagctcattggtggtagtgca
gcagagtccagccaaccaggacaggatccttatgaatgggattctgtgattctccagtga
DBGET
integrated database retrieval system
