Oncorhynchus tshawytscha (Chinook salmon): 112218843
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Entry
112218843 CDS
T05605
Name
(RefSeq) leucine-rich repeat-containing G-protein coupled receptor 5
KO
K04308
leucine-rich repeat-containing G protein-coupled receptor 5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
112218843
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
otw04030
]
112218843
G protein-coupled receptors [BR:
otw04030
]
Rhodopsin family
Others
R-spondin
112218843
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_14
7tm_1
LRR_9
LRR_LRWD1
LRR_EndoS
LRR_NXF1-5
LRR_R13L1-DRL21
LRRNT
DHU1_N
Motif
Other DBs
NCBI-GeneID:
112218843
NCBI-ProteinID:
XP_024235819
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All DBs
Position
LG19:complement(45291972..45321044)
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AA seq
819 aa
AA seq
DB search
MVIMCFLAIIMLTFLLGVADCAGTERTGVLDTDCPWLCNCEDDGMLLRVDCVDLGLAELP
STLSVFTSYLDLSMNNLTLLPNRALSNLHFLQELRLAGNYLTDIPEGAFSGLFNLKVLML
QNNHLKQVPSKALENLRNLQSLRLDANQIASVPESSFRGLASLRHLWLDDNTLTEVPVHA
LAILPTLQAVTLALNSITHIPDHAFANLTSLVVLHLHNNQIQSLGDRCFDGLLSLETLDL
NYNDLAMFPTAIRALPNLKELSFHSNNIRSVPEEAFVGNPSLDTIYFYNNPIQFVGKSAF
QHLPALRMLSLNGATDITEFPDLTGTNSLETLAVTGTHISSLPGTLCDQLPNLIQLDLSH
NRIQHLPSFSGCRKIQKIDLSSNLLSSVPMEGFQDLTHLRLAGNTALRHTLPVQRLPKLR
VVVMPYAFQCCAFVPGENSKSPYIWKTENIKEARDQNNFLVESEVDARPQHSVHCSPAQG
PFQSCQSLFGSWLVRGAVWIIVILSLVSNSLVLVSIALSSKSPISPTQHLLGVLAWVHLL
NGVSSAALAVLDGISFDHYTDYGAWWEGGPGCWIFDFLSVFSSEASVFLLTAVVLYRGCT
VRGSQWSEIETRRIPLGWGCAQGISALCCFLAGAIAALPLLTMGEYGVSSLCMASPYGHS
SRLGYSYATALVLLNSLCYLLMTAIYTRHYCHMDRDTAEKEGVTVQDYSVTKLMACLLFT
NCLLSFPVTLPSFSSLLLLSSPKVAKAILLFVGPLPSCLDPLLYMLLSPHFREDLSRLPY
WTTHRLKKGQRLTSFFSVNSEDMEKQSCDSMQALVSLTL
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggttattatgtgttttcttgcaattattatgctcacttttctgcttggagtggcggac
tgcgcgggcacagaacggaccggggttcttgacaccgactgcccgtggctttgtaattgt
gaagacgacggcatgcttctgcgcgtggactgtgtggacctcggtctcgcggagttgccg
tcaacattgagcgtatttacttcctaccttgatctgagtatgaacaacctcaccctgctg
cccaacagagccctctccaacctacacttcctccaagagctacgactagcaggaaactac
ctaacagacatccctgaaggggctttctctggcctcttcaatctcaaagtattaatgcta
cagaacaatcacctaaagcaggttcccagcaaggctcttgagaacctgaggaacctacag
tctctgcggttggatgccaaccaaattgccagtgttcctgagagctcctttaggggcctg
gcgtccttacgccacctgtggctggatgataataccctaacggaggtgcccgtccatgca
ctggccatcctgccaactctgcaggcagtgaccctggccctcaacagcatcacccacatc
ccagaccacgctttcgccaatctcaccagtctggtggtcctgcatctccataacaaccaa
atccagtcgttgggtgataggtgttttgatgggcttctcagcctggagactctagatttg
aactacaacgaccttgccatgtttcccacggccatcagagccctccctaacctcaaagag
ctgagtttccatagcaacaacatcagatctgtcccagaggaagccttcgtgggaaaccca
tccctcgacacaatatacttctacaacaatcccatccagtttgtaggcaaatcagctttc
cagcatttaccagcgctacggatgctatcactcaacggagccacagatatcacagagttt
ccagacctcactggcacaaacagtttggaaaccctagctgtcacaggtacacacatctca
tcactgccaggtaccctctgtgaccagttacccaacctgatacagctggatctctcccat
aaccggatccagcatcttcccagcttcagtggctgcagaaagatccagaaaattgacctc
agctccaacctgctgtcctccgtccctatggaaggctttcaggacctcacacacctcaga
ctcgctggcaacactgccctgagacacacactacctgtccagagactacctaaactcagg
gtagtggtgatgccctacgccttccagtgctgtgcctttgtacccggagaaaactcaaag
tccccctacatctggaaaacggagaacatcaaggaggctagagaccagaataacttcctg
gtggagagtgaggtagacgccagaccccagcactctgtccactgttccccagcccaaggt
ccgttccagtcatgtcagagtttatttgggagctggctggtgcgaggcgctgtttggatt
atcgtcatcctctccttggtgtccaactccctggtcctggtatccatcgccctctcctcg
aagtccccgatctctcctacccagcatctactgggagtcctggcctgggtccacctcctc
aatggcgtctctagcgccgctctggctgtactagacggcatttcatttgaccactatact
gattatggtgcgtggtgggagggtgggccaggttgctggatctttgactttttgtcagtc
ttctcctcagaggccagtgtcttcctgttgacggcagttgtcttatatcgtggatgtact
gtccgtggctcacagtggtcagagattgagaccaggaggattccattggggtgggggtgt
gctcaaggtatctcagctctgtgttgcttcctggctggagccattgccgccttaccactc
ctcactatgggtgagtatggggtctcctctctctgcatggcctctccctacggacactct
tcccgtttgggctacagctacgccacggccctggtactgctcaactccctgtgttacctc
ctgatgacagccatctataccagacactactgtcacatggacagagacacagcagagaaa
gagggagtcactgtccaggactactctgtgaccaaacttatggcctgcctcctcttcacc
aactgcctcctctctttccctgtgacacttccctccttctcctccctcctcctgctctcc
agccctaaggtggctaaggccatcctgctgttcgtggggcccctgccctcctgtctggac
cccttgctctacatgctcctcagccctcatttcagggaagatctcagcaggcttccctat
tggacaacacacaggctaaagaaagggcagcgcctcactagttttttctcagtgaactcc
gaagacatggagaaacagtcatgtgactccatgcaagcccttgtctctctcacactgtaa
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