Oncorhynchus tshawytscha (Chinook salmon): 112218915
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Entry
112218915 CDS
T05605
Name
(RefSeq) neuroepithelial cell-transforming gene 1 protein-like
KO
K20683
Rho guanine nucleotide exchange factor 3/8
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112218915
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112218915
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_5
PH
PH_13
IQ_SEC7_PH
Motif
Other DBs
NCBI-GeneID:
112218915
NCBI-ProteinID:
XP_042157750
LinkDB
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Position
LG19:50222098..50232996
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AA seq
611 aa
AA seq
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MEESEVGELSVEDEPKRRRISLKRTSTVNSETSPATVNNSKKPPLCRGSSFTFLTPGTPW
DFSLKRKHKEPKDDDTVSLSSFDLKVKRKRKEKKEDDDTVSLSSFDLKEPSNKRVRPLSR
VSSLANLISPSKNGAVRRFGQTIQNMSLRGDSKSPGTSLKSCSKAAGPTPPKRRNSTLWS
ETLDVHQKSTFSTKEIKRQEAIHELSRGEQDLIEDLQMARKAYHDPMLKLSIMTEEELTH
IFGDLDSYIPLHEDLLDKLAKGTGPNGTVGQIGQIVVDWLPGLNAYRDYCSNQLAAKALL
DQKKQDRKVQDFLQRCLESPFSRKLDLWSFLDIPRSRLVKYPLLLREILRHTPPDHPDVP
CLEKAIAIIQGVLSDINMRKGESESQYYINKLEYLDDRQRDPLIDNCKTLLCHGELRNKS
GSKLHVFLFSELLVLTRPVTRHERSCYQVYRQPLPIRDLALEDLQDGDVRMGGSFRGAFS
QGEKAKNVFRVTSLDPTHGQSHTLQVNDVFHKQQWLNCLRSAIDAQPQQQRAPLRDQHSE
ATTMTRAKRRSSVVSMSDMVGEGADENVWHQVGEPILGCKGTETIPASGSSSKIKREWRR
GTQHRRKETGV
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggaggagtcagaggtgggcgaattatctgtggaagacgagccgaagagacgaaggatt
tccttgaagaggacgtccacggtcaactcagaaacctcccccgccactgtcaacaactcc
aaaaaacctccactgtgccgagggagttccttcacctttctgactccaggaacaccatgg
gacttcagtctgaagaggaaacataaagagcccaaggatgatgacactgtcagtctgtcc
agctttgacctcaaagtaaagagaaaacgcaaagagaaaaaggaggatgacgacaccgtc
agtctgtccagttttgacctcaaagagcccagtaacaagcgtgtgcggccactgagccgg
gtgtcatctctggctaacctgatctccccttccaagaatggagccgtccgacgctttggt
caaaccatccagaacatgtcactgcggggtgacagcaagtcgccggggacgtccctgaag
tcgtgcagtaaggcagcgggcccaacacctcccaaacgtagaaacagcactctgtggtct
gaaacactggacgttcaccagaagagcaccttctccaccaaagagattaagagacaggag
gccattcatgagctatccagaggagaacaagaccttattgaagacctccaaatggcacga
aaggcatatcatgatcccatgctgaagctttccatcatgacagaggaggagctaactcat
atatttggagatctggattcgtacattccacttcatgaagacttgttggataagcttgca
aagggcaccggtcctaatggaacagttggtcagattggacagatcgtcgtggactggttg
ccaggtctgaatgcgtacagagactattgcagtaaccagctagctgccaaggccctgttg
gaccagaagaagcaggacaggaaggtgcaggacttcctgcagcgctgcctggagtctccc
ttcagtaggaagctggacctgtggagcttcctggatatacccaggagccggctggtgaaa
tatcccctattgctgagagagatactgagacatacaccaccagatcaccctgacgttccc
tgtctggagaaggcgatagccatcatccagggtgtgctgtctgacatcaacatgaggaag
ggagagtcagagagtcagtactacattaataagctggagtatctggacgacaggcagaga
gacccgctcatcgacaactgcaagaccttgttgtgtcacggagagctacgcaacaagagt
ggctcgaagctgcacgtgttcctgttctctgagctgctggtgctgacgaggccggtgaca
cgtcacgagcggagctgctaccaggtgtaccgtcagcccctccccatcagagacctggct
ctggaggacctgcaggatggagacgtacgcatgggagggtcattcagaggggccttcagc
cagggggagaaagctaagaacgtgttccgcgtgacctccctggacccgacccacggccag
tctcacactctgcaggtcaacgacgtcttccacaagcagcagtggctcaactgtctccgc
agcgccatcgacgcccaacctcaacagcagagggcgccactcagagatcagcacagtgag
gctacaaccatgaccagggccaagcgtcgttcttctgtggtgtccatgtctgatatggtg
ggggaaggggcagatgagaatgtctggcaccaggtcggtgagccaatccttgggtgtaaa
ggcacagagacaatccccgcgtctggttcttcaagtaaaatcaaaagagagtggcgccgt
ggtacgcagcacaggaggaaagagactggggtttag
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