Oncorhynchus tshawytscha (Chinook salmon): 112218920
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Entry
112218920 CDS
T05605
Name
(RefSeq) probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial isoform X1
KO
K15791
2-oxoadipate dehydrogenase E1 component [EC:1.2.4.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00310
Lysine degradation
otw00380
Tryptophan metabolism
otw00785
Lipoic acid metabolism
otw01100
Metabolic pathways
otw01210
2-Oxocarboxylic acid metabolism
Module
otw_M00032
Lysine degradation, lysine => saccharopine => acetoacetyl-CoA
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
112218920
00380 Tryptophan metabolism
112218920
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
112218920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
otw03029
]
112218920
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
112218920
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Paralog
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Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
Lebercilin
Motif
Other DBs
NCBI-GeneID:
112218920
NCBI-ProteinID:
XP_042157759
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All DBs
Position
LG19:50399142..50433709
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AA seq
929 aa
AA seq
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MSAILFLKNLHRVSRVPLSVARPVVGCLYHTRKGVYGHRPKQSQGDTKLHSDPVSYITAL
NRDHGLARLVEAYRAHGHKAAKINPLLPNDPVEDSVPEINMLTGAVQGPLNTSGLRHFGK
AEASVEEVIGYLEESYCGHISIETSQLTSLEEREWLADRFEQLKKEMFTAEERIKLAKLM
LESQEFDHFLASKFSTVKRYGGEGAESMMGVFYEMFRLSAHSGVTDIVMGMPHRGRLNLL
TGLLQFPPELMFRKMRGLSEFPADSPSIGDVLSHLTSSVELDFGAAHPLHVTMLPNPSHL
EAINPVTQGKTRARQQLKQEGDYSPDENAQPGDKVVCLQVHGDASFSGQGIVPETFTISL
LPHFRVGGSIHLIVNNQVGYTTPSARGRSSLYCSDVGKMVGCAVIHVNGDHADEVVRATR
LAVEYQRRFRKDVILDLLCYRQWGHNELDEPSFTNPAMYKIIRSRKSTPDSYTDQLISEG
LMTEEERVAIRTAHYGMLNDKLTNMIFYSPPPMNLQGRWGGLEEPQARVTHWDTGVPAPL
LQYVGAKSVEIPEGVQLHSHLGKMHVTGRLAKVENGTNLDWSTAEAMAFGSLLCQGFNIR
ISGQDVGRGTFSQRHAMIVCQDTNDMYIPLNHIDTEQKGFMEVCNSALSEEAVLGFEYGM
AIAQPKLLPIWEAQFGDFFNGAQIIFDTFISGGEAKWLLQCGMVILLPHGYDGAGPEHSS
CRIERFLQLCDSKEEGVDGDNVNMGVVNPTTPAQYFHLLRRQMIRNFRKPLIVAGPKTLL
RFSGATSSLVDMAPGTYFKPVIGDPSVTPASVQRVVLCSGKHYYALLKQRETSAASQTTA
LIRLEELCPFPLEALQQELNKYTNAKEFVWSQEEPQNMGPWSFVAPRFEKQLACKLRLVS
RPALPAPAVGIGALHQQQNEAVLTATFSS
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgatacttttcctgaaaaacttgcaccgcgtcagcagagtacctctcagtgtc
gctcgaccggtcgtcggttgtctgtatcatacccggaaaggagtctacggtcaccgaccc
aaacaaagccagggggacacgaagttgcacagtgacccagtctcgtatatcactgcactc
aatcgagaccatgggctagcacgcctggtggaggcttaccgagcacatggacacaaggct
gctaaaattaaccctctactgcctaatgacccagtggaggacagtgtgccagagatcaac
atgttgactggagctgtacaaggacccctgaacacatcaggactgcggcattttggtaaa
gcggaggcgtcggtggaggaggtgattggatacctggaggagtcctactgtggccacatt
tccatagagaccagtcagctgaccagcctggaggaaagggagtggctcgcagaccgcttc
gagcagctgaagaaagagatgtttactgcggaggagaggataaagttggccaagctcatg
ctggagtcacaggagtttgatcactttctagcctccaagttctccacggtgaagcgttat
ggcggtgagggagcagagagcatgatgggagtgttctacgagatgttccgtctgtctgcc
cacagcggggtgacggacatcgtcatggggatgcctcaccgcgggagacttaacctcctc
acagggcttctgcagttcccaccagagctgatgttccgtaaaatgcgtggcctcagtgag
ttcccagcagactctccctctatcggcgatgtcctctcccacctcacctcctctgtagag
ctggactttggtgctgcccaccccctccatgtgaccatgctgcccaacccctcccacctg
gaggccatcaacccagtcacccaggggaagacccgtgcccgtcagcagctcaaacaggag
ggagactactccccagacgagaacgctcagcctggtgataaagttgtctgtctccaggtc
catggggatgcctcattctcgggtcaaggaattgttccggagacattcaccatttcacta
ctcccccacttcagagtcggtgggagcatccacctcattgtaaacaaccaagtgggctat
accactccgtctgcgagagggagatcatctttgtactgtagcgatgttggtaagatggtg
ggctgtgcggtgatccatgtgaacggtgatcatgcggatgaggtggtgcgagccacgagg
ctggcggtggagtaccagagacgctttaggaaggatgttatcctggatctgctctgctac
agacagtggggacacaacgagctggacgaaccctccttcactaaccctgccatgtacaag
atcatccgctccaggaagagcaccccagactcttacactgaccagctgatctcagagggc
ctgatgacagaggaggagcgtgttgctatcaggacagcccactacggcatgctgaacgac
aagctgactaacatgatcttctacagccctccacccatgaacctgcaggggcgctgggga
ggtctggaggagccccaggccagggtcactcactgggacaccggggtgcctgctcctctg
ctgcagtacgtaggggccaaatctgtggagatccccgaaggagtccagctacacagtcac
ttggggaagatgcatgtgacgggtcgccttgcgaaggtggagaatggaactaatctggac
tggtccactgctgaggccatggcgtttggctctctgctctgccaagggttcaacattcgc
atcagtgggcaggacgttgggagaggcaccttcagtcagagacatgccatgatagtttgt
caggacacaaatgatatgtacatccccctaaaccacatagacactgaacagaaaggattc
atggaggtgtgtaacagtgctctgtctgaggaggccgtgctgggctttgagtacggcatg
gccatcgcccagcctaaactcctgcccatctgggaggctcagtttggtgacttcttcaac
ggagctcagatcatcttcgacaccttcatctccggaggtgaggctaagtggctgctgcag
tgtgggatggtgatcctgctgccccatggttatgacggagccggacctgaacactcctca
tgccgtatagagaggttcctacagctgtgtgacagtaaagaggagggggtggatggtgac
aatgtcaacatgggcgttgtcaaccctacgactccagcacagtatttccacctgctgaga
cgacaaatgatacgcaacttccgcaagccgctcatcgtggccgggcccaagactctgctc
cgattctctggagcaacatccagtctggttgacatggctcctggtacatatttcaagcct
gtgattggtgacccctcagtcacaccagcaagtgtccagcgggtggtgttgtgctcagga
aagcactactatgccctgttaaagcagagggaaacgtcagctgccagtcagaccacagca
ctgatccgactggaggagctgtgtccctttcctctggaggccctgcagcaggagctgaac
aagtacaccaatgctaaagagttcgtgtggagtcaggaggagccccagaacatgggcccc
tggtcgtttgtggcccccaggtttgagaagcagctggcctgcaagcttcgattggtcagt
cggcctgctctgcccgccccggctgtgggcatcggagcgctccaccagcagcagaacgag
gccgtcctcaccgccaccttctcctcctga
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