Oncorhynchus tshawytscha (Chinook salmon): 112218944
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Entry
112218944 CDS
T05605
Name
(RefSeq) unconventional myosin-Va
KO
K10357
myosin V
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
112218944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112218944
04131 Membrane trafficking [BR:
otw04131
]
112218944
03029 Mitochondrial biogenesis [BR:
otw03029
]
112218944
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112218944
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
112218944
mRNA cycle factors
P-body specific factors
112218944
Membrane trafficking [BR:
otw04131
]
Others
Actin-binding proteins
Myosins
112218944
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
112218944
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
112218944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_16
AAA_22
nSTAND3
MYO6_lever
Motif
Other DBs
NCBI-GeneID:
112218944
NCBI-ProteinID:
XP_042157856
LinkDB
All DBs
Position
LG19:55463881..55507793
Genome browser
AA seq
1865 aa
AA seq
DB search
MAASELYSKYARVWLPDAVEAWKPAELTKDYTPGDRALCLQLEDGTNLEHKIDPQTNSLP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESKIIYTYCGIVLVAINPYESIPIYD
HDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDQRNQSIIVSGESGAGKTVSAKYAMRYF
ATVSGSSSEANVEERVLASSPIMEAIGNAKTTRNDNSSRFGKYIEIGFDKNYHIIGANMR
TYLLEKSRVVFQATEERNYHIFYQLCASSHLPEFKPLQLGNADDFHCTNQGGSPVIEGVD
DAKEMCSTRKAFSLLGINETYQMDLFQILAALLHLGNVEVEERSADSSTILPDNSHLTVF
CELMGVAYQDMSHWLCHRKLKTATETYVKPLSKVHAVNARDALAKHIYAKLFSWIVDHIN
EALRSAVKQHSFIGVLDIYGFETFHINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKE
EIPWTLIDFYDNHPCINLIEAKMGVLDLLDEECKMPKGSDDTWAQKLYNTFLKKSDLFDK
PRMSNKAFIILHFADKVEYQCEGFLEKNKDTVNEEQIIVLKLSKFDLLLELFSDEEKPAG
SLTSRSKMTRPVQAQRDHKKTVGTQFRNSLHLLMETLNGTTPHYVRCIKPNDLKSPFMMD
PMRAVQQLRACGVLETIRISAAGFPSRWTYQEFFNRYRVLMKLKDILSDRKQTCRNVLEK
WVQDQDKYQFGKSKIFFRAGQVAYLEKLRSDKLKKACVRIQKTIRCWLTRKRYLRMRQAA
ITIQKNTRGYQARCLVAFLRRTRAAVIIQKNQRMLVARRRYQQQRSASITMQRLLRAYQA
RQTYRKLLYEHKVLTIQKWVRGWLARRRCRRSLRAVVYLQSCVRRMAARRELRKLRVEAR
SVEHFKKLNVGMENKIMQLQRKVDEQHKENRELSERLRTVERSRAAESERLGGEVERLRV
AEEESRVKADGVPSLLEQLSFLRQELETTREEKEAIQEEARTYRVDTEKVVSELNENNRS
LITEKEDMNQLIQEQRQQIAESKAQTKVGMQLESDIREERDHYQSLLSEYTRLKERHADL
KEEMTISVITDKPGRRRTDSNYSSNESEGTPSSESAEGRHSLVKTHSSTRSSSGFTESET
RSLRGDDAPHQDAVDMSVLLKLQRRVTELEQDKQTLQRHLDKREEAQQDQVKNAEKQRTA
GRAELDLEALKRQELESENKRLKTNLAELRQSLATVANTNPGAKTNPGAKTNPGAKTNPG
AKTSTSSPGPGSAPYNVLLEQLNSSNEELEVRKEEVLLLRSHMVRQEVLKHNKEAYGEMH
KMIHLGETKEADGSTPDYHKLNEDGELWLAYDGLKETNSLLVSQLQVQDRRHEEEVDELR
EEVLRVREENRQQQQFLSQSLLLPQEARIEASLHHEITRLTSDNLDLMEQQEKQDKMIRK
LKKQLKVYVKRVEEYEAGGQMERVAPGPEPRSPVGITRKERDFQGMLEYRRGDESKLLKS
LVVELKPRGVAVNFLPGLPAYILFMCLRHADYSNDDQRVSVLLNSTINSIKGVIKRRGDD
FETVSFWLANTCRFLHCLKQYSGEEAFVKNNTPRQNEHCLCNFDLSEYRQVFSDLAIQNY
QQLVRCMEEALQPMIVPGMLEHENFQGVLGSKPTGLRKRTSSCPGEAVYTVDSILQQLSL
FHATLIQHDVDPELIKQGVIQQFYIICSVTLNNLLLRKDMCSWSKGLQIRYNVWQLEEWL
EEKGLPDCGAKEMLEPLIQAAQLLQVKKKTEEDAQALCTMCSALTTLQIVKVLTLYTPVI
EFEERVSISFIRTIQALLKGRVESPLLLMDAKKIFSVTFPFTHSPLALETIQIPSSLNLG
FLTRV
NT seq
5598 nt
NT seq
+upstream
nt +downstream
nt
atggcagcttctgaactatactccaagtatgcccgggtctggctcccagatgctgtggag
gcatggaagccagcagagctcaccaaggactacactcctggagacagggctctgtgtcta
cagctggaggatggcactaacttggaacacaagatcgacccccagaccaacagtttaccc
ccgctaaggaaccctgatatcctggtgggggagaatgacctgacagctctcagctacctc
cacgaaccagcagttctacacaacctcaaagtgcgcttcgtggagtccaagatcatctat
acctactgtggcatcgtgttggttgctatcaacccctatgagagcatacccatctatgac
catgacatcatcaacgcctacagtggacagaacatgggcgacatggatcctcacatcttc
gctgtggcagaggaggcttacaaacagatggccagagatcagaggaaccagtctatcata
gtgagtggggagtctggggctggtaagacagtctctgctaagtatgccatgaggtacttt
gctacggtcagcgggtcctccagcgaggctaatgtggaggagagagtgctggcctccagc
cccatcatggaggccatcgggaatgcaaagacgactagaaacgacaacagcagtcgcttt
gggaagtacatcgagattggattcgacaaaaactatcacatcatcggggctaacatgaga
acgtacttgctggagaaatctagagtggtgtttcaggctaccgaggagaggaattaccat
atcttctaccaactgtgtgcctcctcacaccttcctgagttcaaacctctccagttaggt
aacgctgatgatttccactgtaccaaccagggaggtagccctgtcatagagggcgtagac
gatgccaaagagatgtgcagcaccaggaaggctttctcattgttgggaatcaatgaaacg
taccaaatggacctcttccagatcctggccgctctgcttcaccttggcaacgtggaagtg
gaagagagatcggcagacagcagtaccatcctgcctgacaatagtcacctgacggtgttc
tgtgagctgatgggcgtggcctaccaggacatgtctcattggctgtgccacagaaaattg
aagactgccacggagacctacgttaagcccctctccaaagtgcatgcggtcaacgcacgg
gacgcgctggccaaacacatctacgctaaactcttcagctggatcgtagaccacatcaat
gaggctctgcgctctgctgtcaaacagcactccttcattggggttctcgacatctatggg
tttgaaacgtttcacatcaacagctttgagcagttctgtattaactacgccaacgagaag
cttcaacagcagtttaacatgcatgtgttcaagctggagcaggaggagtacatgaaggag
gagattccctggactctgatagacttctatgataatcatccctgtatcaacctcatcgag
gccaagatgggggtcctggacctgttggatgaggagtgcaaaatgcccaaaggctctgat
gacacatgggctcagaaactttacaacaccttcctgaagaaaagtgatctttttgacaaa
cctcgtatgtccaacaaagcctttatcatcctccactttgcagacaaggtggagtaccag
tgtgagggattcctggagaagaataaggacactgtcaatgaagagcagattattgtgctc
aaactaagcaagtttgatctgctgttggagctgttcagcgacgaggagaagcctgccggc
tccctgaccagtcgcagtaagatgacacggcctgttcaggctcagagagaccacaagaag
accgttggaacgcagtttcgtaactctctacatctgctgatggagactctgaacggaact
actcctcactatgtacgctgcatcaagcccaatgacctcaaatccccattcatgatggac
cccatgagggcagtacagcagttacgggcttgtggagtcctggaaaccatccgcatctca
gcagcaggcttcccatccaggtggacctaccaggagttctttaaccggtaccgggttctg
atgaaactgaaggacattctctcagacaggaagcagacctgcaggaacgtcctggagaaa
tgggttcaggaccaggacaaataccagtttggaaagagcaagatcttcttcagggcgggt
caggtggcctatctagagaagctgcgttctgataaactgaagaaggcgtgcgttcgtatc
cagaagacgatcagatgttggctgaccaggaagaggtatctccgtatgagacaagctgcc
atcaccatacagaaaaacacacgaggttaccaggcgcgctgtctggtagcgttcctgagg
aggaccagagcagcggttatcatccagaagaaccagcgtatgttagtggccaggagacgc
taccagcagcagaggtctgcatccatcaccatgcagcgtctgctacgggcctaccaggcc
agacagacctaccgcaagctgctgtacgaacacaaggttctcaccatccagaagtgggtg
agaggctggctggccaggcggaggtgcagacgctctctgagggccgtggtatatctccag
agctgtgtgagacgcatggctgccaggagggaactgaggaagctaagggtggaggctcgc
tctgtagaacacttcaagaagctcaacgtcggcatggagaacaagatcatgcaattgcag
aggaaagtggacgaacagcacaaggagaacagagagctcagtgagaggttgcgtactgtg
gagcggtcccgggctgcggagagcgagagactgggtggagaggtggagcgactgcgcgtg
gcagaggaggagagcagagttaaagcagacggggtaccctccctcctggaacagctgtca
ttcctccgtcaggaattggagactaccagggaggagaaagaggccatacaggaggaggct
aggacatacagggtggacactgagaaggtggtgtcagagttgaatgagaacaaccgctcg
ttgataacggagaaagaggatatgaatcagttgatccaggaacagagacaacagatcgca
gagagcaaagcccagactaaagtcggtatgcagctggagagtgatatccgtgaggagcgt
gaccactaccagagtctgctgagtgaatacacacgtctaaaagagagacacgctgacctg
aaagaagagatgactatcagtgtgatcaccgataaaccaggccgccggagaacagactcc
aactacagcagcaatgagtctgagggaactcccagctctgaatctgcagagggaagacac
agtttggtgaaaactcacagctcaacacgcagctcctcagggttcaccgagtccgagacc
agatctctacgaggagacgacgcgccacaccaggacgcggttgacatgtcagtcctgttg
aagctgcagaggagagtcactgagctggagcaggacaaacagacactgcagagacacctg
gataagcgggaggaggcacaacaagaccaggtcaaaaatgcagagaagcaaagaactgca
gggagagctgagctggacctggaggctctgaaacgccaggagctggagtcggagaacaag
aggctgaagacaaacctggcggagctgcgtcagtctctagctacagtcgccaacaccaac
cccggggctaagaccaaccccggggctaagaccaaccccggggctaagaccaaccctggg
gctaagacctccaccagcagccccgggccgggctccgctccctacaacgtgctcctggag
cagctcaactcctccaacgaggagctggaggtcaggaaggaggaggtgctgctcctccgc
tcacacatggtccgccaggaggtgctcaaacacaacaaggaagcgtatggagagatgcat
aagatgattcatcttggtgaaaccaaagaggctgatggatccactcctgattaccacaag
ttgaacgaggatggagagctgtggctggcttatgacgggttgaaggagaccaacagcctg
ttggtgtctcagctgcaggtgcaggacaggaggcatgaggaggaggtggatgagctgaga
gaggaggtgctcagagtgagagaggagaacaggcagcagcaacagttcctctcccagagc
ctcctcctaccccaggaggctcgcatcgaggccagcctgcaccacgagatcacacgcctt
accagcgacaacctggacctgatggagcagcaagagaaacaggacaagatgatccgcaaa
cttaaaaaacagctcaaagtctacgtgaagagggtagaggaatacgaagctggcggtcag
atggagagggtggctccaggtccagagcctcgctctcctgttggtatcacccggaaggag
agggacttccaaggcatgctggagtaccgtaggggggatgagagcaaactactgaagagt
ctggttgtggagctgaaacctcgcggtgtggcggttaacttcctccctggtctgccggcc
tacatcctgttcatgtgtctgagacatgctgactactctaatgatgaccagagagtcagc
gtcctgctcaactctaccatcaacagcatcaagggagtcatcaagaggcgaggagatgac
tttgagactgtgtctttctggctggccaacacctgccggttcctacactgcctgaagcag
tacagtggagaggaggcgtttgtaaagaacaacaccccgcggcagaatgagcactgcttg
tgtaactttgacctgtcagagtaccgtcaggtcttcagcgatctggccattcagaactac
cagcagctggtcagatgtatggaggaggccctgcagcccatgatagttccgggtatgctg
gagcatgagaacttccagggagttctggggtctaaacccacgggcctacggaagaggacg
tccagttgccccggagaggctgtttacactgtggacagcatcctacagcaacttagtctc
ttccacgctaccctgattcagcatgacgtcgaccccgagctcatcaaacagggggtgatt
cagcagttctacatcatctgttctgtcactctcaacaacctgctgctgaggaaggacatg
tgctcctggagtaaaggactgcagatcaggtataatgtgtggcagctggaggagtggctg
gaggagaaggggctgccagactgtggagctaaagagatgctggagccgctgatccaggcc
gctcagttactacaggtcaagaagaagactgaggaagacgcccaggctctctgcaccatg
tgctctgccctcaccacactacagattgtgaaagtgctaaccttgtacaccccagtgatt
gaatttgaggaacgggtttcaatatccttcattagaaccatacaggccctgttgaaaggc
cgtgttgagtcaccgctgctacttatggacgccaagaagatattctctgtgacatttccc
ttcacccactcccctctggctttggagaccattcagatccctagcagtctgaatctagga
ttcctcacacgggtctaa
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integrated database retrieval system
