Oncorhynchus tshawytscha (Chinook salmon): 112218975
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Entry
112218975 CDS
T05605
Name
(RefSeq) IQ motif and SEC7 domain-containing protein 3
KO
K12495
IQ motif and SEC7 domain-containing protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112218975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112218975
Membrane trafficking [BR:
otw04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
112218975
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec7
IQ_SEC7_PH
SOS1_NGEF_PH
Shugoshin_N
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
112218975
NCBI-ProteinID:
XP_042157954
LinkDB
All DBs
Position
LG19:complement(31355714..31392669)
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AA seq
1148 aa
AA seq
DB search
MVMAVQGTSLLENPVQAVLYLRELTTIVQNQQSLIQTQRLRIDELDLRVDELLGENRNLR
EARGVQPHHHHPDHNPSLHCHHPPHQHPYPQDTSSLPAQPMPEVHPAEPEKSSPQPANPE
DMQLVPAHSQPQSLSPLQGEAILGEGEDSRTSMGCHTLVPLVPLAPLTPTTFCRSLALAR
QSESQTILHQFCCPAPEAPEAALTGSSSDGQLLGLEGGTSSSRQEGEGSVGVARREGPSD
YELALENKTKQIEELELRYGGHLASRRAACRIQTAFRQYQLSKNFQKIRNSLSESKLPRR
ISLRRPNPSRGQNPTQRHSFLLESGGPPLRPKTPPPPPSRSTSLPPSASPATGPGPSLTQ
LEDCFSEQVRSLAHSIDEALRGWSLSEGVEGGTGGLLMDPEVFRAAGQSACMPRSASSLL
MAFRDVTVHIDTNNYTVSTTTTSTTTTTHGNTGAGAGGSRQASMEGGGGEGGGGVGRETT
TSQLGGEKEFPAPPPSEELLKGGGLRMESTMTGQGRELGGQSGSEILSSTSTSTSAQSNQ
YTTQSSYPQYHQYSTYPQAHHPQSQPGSQSVRDPTTEALQALVLSLPRDQCQNPASCRSP
TLSTDTHRKRLYRIGLNLFNVNPERGIHFLITRGFVPDTPMGVAHFLLQRKGLSRQMIGE
FLGNSKLLFNRDVLDCVVDEMDFSGMELDEALRKFQAHIRVQGEAQKVERLIEAFSQRYC
MCNPEVVQQFHNPDTIFILAFAVVLLNTDMYSPNIKPQRKMGLNDFIRNLRGVDDGADIP
REMVTGIYERTQQRELRSNEDHVTYVSRVEQSILGMKTILSVPHRRLVCCCRLFEVADFN
KPLKQKLANTQREVFLFNDLILILKLCPKKKTSASYTFCKAMGLLGMQFHLFSNEYYAHG
ITMLSPFSSEKKQMVSFCSPSGEELRKFTEELRESITEVNEMEQIHIQWELKREQGVQTH
TPHTNGGQMGTLSRHTGSPTAQKDPYDTTSNNTVEVSIHNRLLQTYHMTQASPDRLLQTY
HVTSPDSTQLALAAPLAMLSPTHPGELRPDTLIQCQQIVKVIVVDQSGQGRMEAFISQGS
PASHHRLIQSAMSTPVRIREGSEPPLPPPPPPYNHPHQYCPPDSPYPLPHTLPHPLRRRN
SSGSRSLV
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atggtcatggctgtgcaggggaccagcctgctagagaacccagttcaggcggttctgtac
cttagagaactgaccactattgttcagaaccaacagagcctcatccaaacacaacgcctg
cgcattgacgaactggacctacgcgtggatgagctgcttggggagaacaggaatctgcgt
gaagcaagaggtgtacaacctcaccatcatcacccagaccacaacccgagccttcattgt
catcatcctccgcatcaacatccgtacccacaagacaccagttctctgcccgcccagccc
atgcctgaggttcatcctgctgagccagaaaagtcctctcctcagcccgccaatccggag
gacatgcagctggtaccggcccattcccagccacagtcactgagccctttgcaaggcgag
gccatcctgggcgagggggaggacagcaggaccagcatgggctgccacacactggttccc
ctggttcccctagctcccctcactcctaccactttctgtcgctcgctggctctcgccagg
caatcagagagtcagacaatactacatcagttctgttgtcctgctccagaggctccagag
gctgctctcactggctcctccagtgatgggcagctgttgggtctggagggcgggacttcc
tccagcagacaggaaggagaggggtcagtaggtgtggctcgtagagaaggacccagcgac
tatgaacttgccctggagaacaagaccaaacagatagaggagttggagctgaggtacggt
ggtcacctggcgtcgcggcgcgctgcgtgtcgtattcagacagcgttccgtcagtaccag
ctcagtaagaatttccagaagatccggaactctttgtcagagagcaagttgccacgccgc
atttccctgcgccggcccaaccccagccggggccagaaccccacccagcgacacagcttc
ctgttagagagtgggggcccaccattgcgccccaaaacacccccaccacccccctcacgc
tccacctccctgccgccctcagcctcccctgccacgggccctggcccctcgctcacacag
ctggaggactgcttctcagagcaggtacgctcgctggcccattcgatagacgaggccctg
cgtgggtggagcctgtcggagggggttgagggggggacaggggggctgttgatggacccc
gaggtgtttcgggcggctggtcagagtgcctgcatgcctcgcagtgccagctccctgctc
atggccttcagagatgtcaccgttcacatcgacaccaacaactacactgtctccacaact
accacctccactaccaccactacccacggcaacacaggggcaggggcgggaggaagcagg
caagcctcaatggaagggggagggggagaggggggtggaggggtagggagagaaacaaca
acctcccagctggggggtgagaaagagttccctgccccccctcccagtgaggaattgttg
aagggaggagggttgaggatggagtcaactatgacagggcaggggagagagttggggggg
cagagtggctcagagatactcagttccacctctacctccacctcggcccagtctaaccag
tataccactcagtcctcctatccccagtaccaccagtattccacatacccccaggcccat
cacccccaatcccagccagggtcccagtcagtcagggaccccaccactgaggccctccag
gccctggtcctctctctgcccagagaccaatgccagaaccctgcctcctgccgatccccc
acactctccactgacacacaccgcaaacgactctaccgcatcggactcaacctcttcaac
gtgaacccagagagaggcatccacttcctgatcacacgtggtttcgtcccagacacgccc
atgggcgtggcccacttcctgttacagaggaagggcctaagccgacagatgattggagag
ttcctggggaacagcaagctgctcttcaacagagatgtcctggactgtgtggtcgatgag
atggacttctctgggatggagctggacgaggctctgaggaagttccaggctcacatcaga
gtccagggagaggcccagaaggtggagagactcattgaagctttcagtcagaggtactgc
atgtgtaatcctgaggtggtgcagcagttccataacccagacaccatcttcatcctggct
tttgctgtggtactcctcaacacggacatgtactcccctaacatcaaacctcaacgcaag
atgggcctcaatgatttcatacgcaacctacgaggagtggacgacggagcagacatcccc
agggagatggtgacagggatctatgagaggacccagcagagagagctacgctccaacgaa
gaccacgtcacctacgtcagccgtgtggaacagtccatactgggcatgaagacgattctg
tctgtgccccaccgtaggctggtgtgttgctgtcgtctgtttgaggtggcagacttcaac
aaacccctgaaacagaaactggccaacacccagagagaggtgttcctgttcaacgacctc
atacttatcctgaagctgtgtcccaagaagaagacttctgcctcctacaccttctgtaaa
gccatgggtctactgggcatgcaattccacctcttcagtaacgaatactatgctcatggc
atcaccatgttgagtccgttctcgtcagagaagaagcagatggtgagtttctgctccccc
agtggagaggagctcaggaagttcacagaggagctacgagagtccatcactgaggtcaac
gagatggagcagatacacattcaatgggagctgaagagagaacagggggtgcagactcac
accccccacaccaacggaggacagatgggcacactcagtcgacacacaggatcccccaca
gcccagaaagatccgtatgacacgactagcaacaacactgtggaggtgtcaattcacaat
aggctgctgcagacctaccacatgacccaggccagccctgataggctgcttcagacctac
catgtgaccagtcctgactccacccaactggctctggcagcacccctggcaatgcttagc
cccacccaccctggagaactccgcccagacaccctcattcaatgccagcagatcgtcaag
gtgattgttgtggaccagagcggccaggggcgaatggaagccttcatcagtcaaggaagc
cccgcctcccaccaccgcctcatccaatcagcgatgtccacaccagtacggatcagagag
ggatctgagccccctctgcctccccctcctcccccctacaaccacccccaccagtactgt
ccccccgactccccctacccccttccacacacccttcctcaccccctgcgcagacgcaac
tctagtggttcccgcagcctcgtctga
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