Oncorhynchus tshawytscha (Chinook salmon): 112218982
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Entry
112218982 CDS
T05605
Name
(RefSeq) genetic suppressor element 1
KO
K27276
genetic suppressor element 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112218982
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
112218982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3736
Motif
Other DBs
NCBI-GeneID:
112218982
NCBI-ProteinID:
XP_042157101
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All DBs
Position
LG19:33306888..33331354
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AA seq
1059 aa
AA seq
DB search
MISMPTRTTATVSPLTPLANGSAAAQSAHSGFAAALRQLAKQAEDPRGSSPSSESSVSSP
ATCLSNSVTAPKRGLSGPLQTSSGVDSLPSTPPGVTIAPTHSKTSNILWIGEGHQAESGV
CGVSRESVGSELSPSQEKGGYPVPSHHVLAHPSYPFSLTPSSVMQDRRLQGLSLPGQVHP
AVPSGTVPEEYLRGLRPFATSDDLRLPSLHLGLDPVTAAHVTAAAAYYHPAYLHHLHRSV
YRPPCLPPPPTQNTLPTSTTYTGQSIDHPAYLHHLHRMEESLCLSALRSQFYSVPAGGAF
STLHPSALHMHVPGARYPGELSHTHSAIAERKGTGKPTLPALPVPKPLQPDLQSSRGSAS
HPIPTLVPSQIGNAHTASASTGRLHGTLASAMKLQQANGEKLWLSKQRRQGQESEAWSPG
EGVEPRRHSYRSNASQRDPETSPDPRRRFDSPIPPSRPPPGLTRAEWPPSWERGEEGCRR
MGEGPERFSFIRGPVLQISGLWSMAELERSTHSLHHQHNHLHQQGSLRLSSPSPSSDLGV
QRPSSSPSPSRDLQKSERPGQEPQNPVVYDKILQQQHRLVSKLDLEESRRREAREGGYYY
DLDESYDESDEEEVRAHLRRVAEQPPLKLDTSSEKVCFLRVCGLTTLAHRDQLFHQKRRK
RRRMLRERSISPPPVQGKRKTPCSTVAPVPPLSTTLTPEEMDCFPQLEDKKHFLNMLSLS
HVTSQQRRDKEKMEGLLKAIKLKSVTLDTIRYNPLPLCSSTPVLSTGDYTPDLPACKSNG
LDYPDSPSPLPPYPHHPDNLHTDPLNPQPPPPRHPPPLGLHPDRAGLCERHPSKRLQGLQ
NGAGHLGHPTQLKVPLTGQNGQNKPWERFIREDFAQHFHQAVLQSTHKTLGSSICVPESS
IKSEPSAPYNIPPLKRPDPLHTPPHPTNGHHPYPSPPHHDPDGVRVERSEEDEEEDEEET
PRKWKGIESVFEAYQEYVDERGMERQVLHSQCRRLETQNYTLSLTAEQLSHSMAELLSQR
QRVRDERERLQAQLEHFRKCLTLPNVHWGKGQLKGHLPR
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgatctccatgccaactcgcaccacggccacggtcagccctctcaccccgcttgccaat
gggagtgcggctgctcagtctgctcactctggattcgctgccgccctccgtcaattggcc
aaacaggctgaagatcccagaggttcttctcccagtagtgagtcttcagtctcctctcca
gccacctgtctcagtaattcagtcactgctcctaagagggggttgtcaggtccactccag
acctcaagtggggtagacagccttccctccacccctcctggagtcaccatcgccccaact
cacagcaagaccagcaacattctctggataggagaagggcaccaggctgagtcaggtgtt
tgtggagtgagtagggagagtgttgggtctgagctcagcccttcccaggagaaaggaggt
tatcctgtcccctctcatcacgtcttggctcacccctcttaccccttcagcctcaccccc
agctctgtcatgcaggaccggcgactacagggccttagtctacctggtcaggtacaccct
gcagttccctctgggacggtcccagaggagtacctgagaggactccgcccctttgctacc
tcagacgacctccgcctaccctcgctgcacctggggcttgaccccgtcaccgctgcccat
gttactgctgctgctgcctactaccaccctgcctatctccaccacctgcacaggtcagtc
tatagaccaccctgcctacctccaccacctacacagaacaccctgcctacctccaccacc
tacacaggtcagtctatagaccaccctgcctacctccaccacctacacaggatggaggag
tctctgtgtctgtctgcactgcgctctcagttctactctgtaccagcaggcggagccttc
tctaccctccacccctctgccctccacatgcacgtgcctggggcacgctaccctggggag
ctcagccacacacacagcgcaatagctgagaggaaaggcacaggtaagcccaccctccct
gccctcccagtccctaaacctctacaaccagacctccagtcctccagggggtcagcctct
caccccattcccaccctggtgccctctcagattgggaacgcacacactgcctcagcctct
accgggaggctccatggaacactggcctctgcaatgaagctccaacaggccaatggggag
aagctttggttgtcaaagcaacgccggcaggggcaggagagtgaggcgtggtcacctggg
gaaggggtggagcctaggagacacagctacaggtccaacgccagccagcgtgacccagag
acctccccagaccctcgtcgcaggtttgactccccaattcccccctcccgccctcctcct
ggtctgaccagagctgagtggccccccagctgggagcggggggaggagggatgcaggagg
atgggggagggcccagagaggttctccttcatcaggggacccgttctgcagatttctggc
ctctggagcatggctgagcttgaaagatccactcacagtctccaccaccaacataaccac
ctccaccagcagggctcactgcgcctgtcctcccccagccccagctctgacctgggggtc
cagcgcccgtccagctccccctctccctccagggacctccagaagtctgagcggccaggc
caggagcctcaaaacccagtggtgtacgataagatccttcagcagcagcacaggctggtc
agcaagctggatctggaggagagcaggaggagagaggccagggagggagggtattactat
gatctagatgagtcgtatgatgagagtgatgaggaggaagtgagggcccacctcagaagg
gttgcagagcagccccccctaaaactagacacatcctcagagaaggtgtgttttctgcgc
gtgtgtggcctgaccacgctggcccatcgtgaccagctgtttcatcagaagaggaggaag
aggaggaggatgctgagagagcgcagcatctcccctcctcctgtacaaggcaagaggaag
accccttgttctactgtggcacctgttccccccctcagcaccactctcacccctgaagag
atggactgtttcccccaactggaggacaagaaacacttcctcaacatgcttagcctgtcc
catgtcaccagccagcagaggagagataaggaaaagatggaggggttgctgaaggctata
aagctaaagagtgtgacattggacaccatcagatacaacccattacccctctgtagcagc
actcctgttctctcaactggcgactacacacctgacctcccagcctgcaagtcaaacgga
ctagactacccagactccccaagccccttgcctccctacccccaccatcccgacaacctt
cacacagacccactaaacccccaaccccctccaccccgccacccccctcccctgggcctc
caccccgacagggcaggactgtgcgaacgtcacccatctaagaggctccagggtctccag
aacggagcgggccaccttggccatcctacccaactgaaggtgcccctgactgggcagaat
gggcagaacaagccctgggaaagattcatccgggaggacttcgcccaacatttccaccag
gctgtgttgcagtctacccacaagaccctgggtagctccatatgcgttccggagtccagt
ataaagtctgagccctcagcgccctacaacatcccccctctgaagagaccagaccccctc
cacacacctccacacccaaccaatgggcatcatccctacccttctccaccccaccatgac
cctgatggcgtacgggttgagcgctcagaggaagatgaggaagaggatgaggaagaaacc
cctaggaagtggaagggcatagagtccgtctttgaggcgtatcaggagtatgtggatgag
cggggtatggagagacaggttctccacagtcagtgcaggaggctggagactcagaactac
actctcagcctgacagctgaacaactctcacacagcatggcggagctgctgagtcagaga
cagagggtgagagatgagagagagagactgcaggctcagctagagcacttcaggaagtgt
ctgacccttcccaacgtgcactggggcaaggggcagctcaaaggtcaccttccccggtga
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