Oncorhynchus tshawytscha (Chinook salmon): 112218986
Help
Entry
112218986 CDS
T05605
Name
(RefSeq) ELKS/Rab6-interacting/CAST family member 1-like isoform X1
KO
K16072
ELKS/RAB6-interacting/CAST family member 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112218986
Membrane trafficking [BR:
otw04131
]
Exocytosis
Others
Others
112218986
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
112218986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cast
RBD-FIP
Crescentin
AAA_13
DUF5798
Motif
Other DBs
NCBI-GeneID:
112218986
NCBI-ProteinID:
XP_042157547
LinkDB
All DBs
Position
LG19:33663770..33700205
Genome browser
AA seq
1113 aa
AA seq
DB search
MYGSSRSVGRADANHSGGRDGGSSQGSGRSPHLPRSPRMGHRRTNSTGGSGGGPGGAGGK
TLSMENIQSLNAAYATSGPMYLSDNEVAMSDHVNKSGREMTTMGRQRVTYGSRASAGGGG
GVAASTPNIATSAQANAVLPGGMMAGDALAFGDHHMASTVPHSLRQARDNTILDLQAQLK
EVLRENELLCREVEVKESKLSSSMNSIKTFWSPELKKERALRKDEVSKITVWKEQYRVVQ
DETQHLHMTVQALQDELRIQRDLNQLLQQDPASQGRDLALTSEPTEENYRRLHGDHERQA
KELFLLRKTLEEMELRIDTQKQTLGARDESIKKLLEMLQSKGPSAKSSEEDQERTRRLAD
AEMHRHHLESLLDQRDRETTALREELHRRYEGTPESTKTKALQTVIDMKDAKINSLERGL
RDMEEEVIMLKSNGLLSCEERQEEMKQMEVYRSHTKFMKNKMDQVKQDLSRKDTELLGLQ
TKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETTLNKKSKQIQ
EMSEEKGTLNGEIHDLKDMLEVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQA
DTSNTDTALTTLEESLAEKERIIERLKEQRDRDDREKTEEIDSNKKELKDLKEKVSLLQG
DLSDRETNLLDLKEHASSLASSGLKKDSKLKTMEISLEQRKEACLKLENQLKRAQNATLE
AKANTELSERITSLEREVTRHREDSGKAQAEVDRLLEILREMENEKNDKDRKINELESQS
TRQTKDQSKKVASLKQKEHVEKSRNAQLVDEAKKREDNISESSQQVKDSLRLKTERIEEL
EEALRESVQITAEREMVLAQEEAARNHQEKQIEELLGAMEKVKQELESMRAKLSSTQQSL
CEKEAHLTTLRAERRKHLEEVLEMKQEALLAAISEKDANIALLELSSSKKKKTQDEVALL
KREKDRLVQQLKQQTQNRMKLMADNYGDDHLKTAPDQTNHKPSPDQMIPPLLSLSENRSK
LKLYIDHLTDLCHDRDPSILSDLTPPAHYHHANPAAWEEELHKLTLEQLELELELCEKES
GELQEYANSVLQQIADYCPDILEQVVNALEESC
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgtacggcagctcccgttccgtgggcagagcggatgccaaccacagcggagggagagat
ggggggagcagccagggttcgggtcgctcccctcatctcccccgttccccacggatgggc
caccgtcgcaccaacagcacagggggcagtggagggggtccaggcggagcagggggtaag
accctctccatggagaacatccagtccctcaatgccgcctatgccacctcaggacccatg
tacctgagcgacaacgaggttgccatgtccgaccacgttaacaagagtggtcgagagatg
accacaatgggtcgacagagggtgacctacgggtcaagagcaagcgcaggagggggtgga
ggggtggcagctagcactcccaacatcgccacatctgcccaggccaacgctgtgctccct
gggggaatgatggcaggtgacgccctggcttttggggatcaccacatggcctccacggtc
cctcactccctgagacaggcccgggacaacaccatactggacctgcaggcccaactcaaa
gaggttctgcgtgagaacgagttgctgtgtcgtgaggtggaggttaaggagagcaagctg
agttcctccatgaactccatcaagactttctggagccctgagctgaagaaggagagagcc
ctaaggaaggacgaggtgtccaagatcactgtctggaaggaacagtaccgcgtggtgcag
gatgagacccagcacctccatatgacggtccaggccttgcaggatgaactgaggatacag
agagacctgaaccagctgcttcagcaggaccctgccagccaaggtcgtgacctggccctg
acctctgaacccacggaggagaactaccgtcggctgcacggggaccacgagcgtcaggcc
aaggagctgttcctgctcagaaagaccctggaggagatggagctgaggatagacacccag
aaacagaccctgggcgccagggatgagtccatcaagaagctactggagatgctgcaaagc
aaagggccgtcggctaagtcgtcagaggaagaccaggagagaaccaggagactggctgat
gctgagatgcacagacaccatctagagtccctactggaccagagagacagggagacgact
gctctacgagaggagctgcaccgtcgatacgagggaaccccagagtccacaaaaaccaag
gctctacagactgtcatcgacatgaaggatgctaagatcaactctctggagcgaggtctg
agggacatggaggaggaggtgattatgttgaagtccaatggcctgctgagctgtgaggag
agacaagaggagatgaaacagatggaagtctaccgcagccacaccaagtttatgaagaac
aagatggaccaggtgaagcaggacttgtccaggaaggacacagagttgctgggtttgcag
accaagctggagactttgaccaaccagttctctgatagcaagcagcacatcgaggtcctc
aaggagtcgctgaccgctaaagaacaacgagctgccatcctacagacagaggtggatgct
ttgcgtctgcgtctggaggagaaggagaccacactgaacaagaagagtaaacagatccag
gagatgtctgaggagaagggcacgctcaacggagagatccacgacctcaaggacatgctg
gaggtcaaggagcgcaaggtcaacgtcctgcagaagaagattgagaacctgcaggagcag
ctgagagacaaggagaagcaaatgagcagcctgaaggagagagtcaagtctctacaggca
gacacctctaacacagacactgctctcaccacactggaggagtcccttgctgagaaggag
cgtatcatcgagcgtctgaaggagcagagagaccgagacgacagggagaagactgaggag
atcgacagcaacaagaaagagctgaaggatctgaaggagaaagtcagtctgctacaggga
gatctgtctgacagagagactaacctgttggacctgaaggagcatgcgtcgtccctggct
tcctcagggctgaaaaaagactccaagctgaagactatggagatctctctggagcagagg
aaggaggcgtgtctcaaactggagaaccagctcaagagggcccagaatgcgacgttggag
gccaaagctaacacagagctgtcggagcgcatcacctccctggagagggaagttacccga
caccgagaggattctgggaaggctcaggcggaggtggaccgactgctggagatcctgaga
gagatggagaatgagaagaatgacaaggaccgcaagatcaatgagctggagagtcagtcc
accagacagaccaaggaccagagtaagaaggtggcatcactgaaacaaaaggagcatgtg
gagaagagtaggaacgcccaacttgtggacgaagccaaaaagagagaggacaatatttcc
gagagctctcaacaggtcaaggactctctacggttgaagacggaacgtatcgaggagtta
gaggaggctctgcgagagagtgttcagatcacagcggagagagagatggtgctggcacag
gaggaggctgccaggaaccaccaggaaaaacagattgaggagctgctgggcgccatggag
aaggtgaaacaggagctggagtccatgagggccaagctgtcgtctacccagcagtccctg
tgtgagaaggaggcccatctgaccacgctgagggctgaacgcaggaaacacctggaggag
gtgctggagatgaaacaggaggcgctgctggcagccatcagtgagaaggatgccaacatc
gccctgctggagctgtcatcgtccaagaagaagaagactcaggatgaggtggctctgctg
aagagagagaaggaccgtctggtacaacagctcaaacagcagactcagaaccgtatgaag
ctaatggcagacaactatggggacgaccacctgaagaccgcccccgaccagaccaatcac
aaaccttctccagatcagatgatcccccctctcctgtccctgagtgaaaatcgcagtaag
ctgaagctctacatcgaccacctgactgacctctgccacgaccgagaccccagcatcctc
agtgacctgaccccgcccgcccactatcaccacgccaacccagcagcctgggaggaggag
ctacacaagttgactctggagcagttggaactggagttggagttgtgtgagaaggagagt
ggggagctgcaggaatatgccaattcagtgctgcagcagatcgctgactactgccctgac
atcctggagcaggtggtcaacgcgctggaggagtcctgctga
DBGET
integrated database retrieval system
