Oncorhynchus tshawytscha (Chinook salmon): 112219028
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Entry
112219028 CDS
T05605
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 2-like
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
112219028
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112219028
Transporters [BR:
otw02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
112219028
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GFIT
Motif
Pfam:
SNF
PIRT
Motif
Other DBs
NCBI-GeneID:
112219028
NCBI-ProteinID:
XP_024236021
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Position
LG19:47614355..47623534
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AA seq
663 aa
AA seq
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MERVTTSPVEQNGTGTEISPTTVILETDGNISVLPGTVTGDGDDDDEGGDENKARGNWSN
KMDFILSMVGYAVGLGNVWRFPYLAFQNGGGAFLIPYLIMLGLAGIPIFLLEVSLGQFAS
QGPVSVWKAIPALQGCGIAMLIISVLIAIYYNIIMCWTLYYLFASLKGSLPWANCKNKWN
TQHCKDKDMLLLDSCILRDANATSIRNTTLCLSADVIGNLSKLTNITSEINKTYVSPSEE
YFKYNVLNISRGIEYPGEIRWPLALCLLLAWVIVYASLAKGIKSSGKVVYFTATFPYVVL
VILLVRGVTLPGAGDGILYFITPKWEKLYDAKVWKDAATQIFFSLSAAWGGLITLSSYNK
FHNNCYRDTIIVACTNSATSIFAGFVIFSVIGFMAHELKVPIEQVADGGPGIAFVVYPEA
LTRLPLSPFWAIIFFLMLLTLGLDTMFATIETIVTSVSDEFPRYLRKYKALFTLGCCTSF
YILGYPMITENGMYMLQLVDTYAASYSLIIIAIFELVGVSYIYGLKRFCEDIEMMIGFQP
NMFWRFCWAFVTPTILTFILGLSLYHWKVMTYETYTYPTWSMVMGWLMVVCSVIWIPIMF
GIKMHLAPGTFIQRLKLVCSPQPDWGPFLMKHRGERYKNMIDPLGTNSLGLKLPPKGLGQ
TQC
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggagcgtgttacaacgagcccagtagagcaaaatggcacggggacggagattagtccc
accactgtgatactggagacagatggaaacatttcggttctacctggcacagtgaccggg
gacggggatgatgatgacgaaggaggagatgagaataaagcgaggggaaactggtccaat
aaaatggacttcattctctcaatggttggatatgctgttggtttgggaaacgtctggaga
ttcccatacctagccttccaaaatggaggaggtgctttcttgattccttatctaatcatg
ttgggtcttgctggaatccccatattcttattggaggtgtccttggggcagtttgcaagc
caaggacccgtgtccgtatggaaagcaatccctgctcttcaaggttgcgggattgccatg
ttgataatatcagtcttgatagcaatatactataacataataatgtgctggacattgtac
tacctgttcgcttcgttgaagggctcactcccctgggcgaactgcaagaataaatggaac
actcaacactgcaaggacaaagacatgcttcttcttgattcatgcattctgcgggatgca
aacgccacctctataaggaatactacactatgtttgtctgctgatgtcattgggaatctg
agcaaactcactaacatcacatctgagatcaacaaaacctatgtcagcccaagtgaagag
tattttaaatataatgtactgaacatctccagaggaatagaatacccaggggaaatccgc
tggcctctggccctctgtcttctcttggcatgggttattgtctacgcctcactggctaaa
ggaatcaaatcatctgggaaggtggtgtatttcacagctacgttcccctacgtggtgctg
gtgattctgctggtcagaggagttactctgcctggagctggggatggcatcctctacttc
atcactcccaagtgggagaaactctacgatgccaaggtgtggaaggatgctgctacccag
atcttcttctccttgtcagcagcctggggtggactcatcacgctgtcctcctacaacaag
ttccataacaactgctacagggacaccatcattgtggcctgcaccaacagtgccaccagc
atctttgcagggtttgtcatcttctctgtcatcgggtttatggctcatgagctgaaagtg
ccaatcgaacaggtggctgatgggggtcctggcatagccttcgtagtgtatccagaggcc
ctcaccagacttcctctctctcctttctgggccatcatcttcttcctcatgctactcacc
ctgggactggataccatgtttgccaccattgagaccatagttacgtctgtgtcagatgag
ttccccagatatctgaggaagtacaaggccctcttcaccctggggtgctgcacctctttc
tacatcctggggtaccccatgatcacagagaatggaatgtatatgcttcagctggtggac
acatatgcagcctcatactctctgatcatcatcgccatctttgaacttgttggagtatca
tacatttatggtctgaagaggttctgtgaagacattgaaatgatgatcggtttccagcca
aacatgttctggaggttctgctgggcctttgtgacccccaccattctcacatttatccta
ggtctgagtctgtaccactggaaggtgatgacctatgagacctacacctaccccacctgg
tccatggtgatgggctggctcatggtggtgtgttctgttatctggatccccatcatgttt
ggcatcaagatgcacctggcccccggcaccttcatccagcgtctgaagctagtgtgctcc
cctcagccagactggggtcccttcctgatgaagcacagaggagaacgctacaagaacatg
atcgacccgctaggaaccaactccctggggctcaaactccctcctaaaggcctgggccag
acccagtgctaa
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