Oncorhynchus tshawytscha (Chinook salmon): 112219049
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Entry
112219049 CDS
T05605
Name
(RefSeq) solute carrier organic anion transporter family member 1C1-like
KO
K08747
solute carrier organic anion transporter family, member 1C
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
112219049
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112219049
Transporters [BR:
otw02000
]
Solute carrier family (SLC)
SLC21/ASLCO: Organic anion transporter
112219049
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OATP
MFS_1
Kazal_2
Kazal_1
DUF2244
Motif
Other DBs
NCBI-GeneID:
112219049
NCBI-ProteinID:
XP_042157784
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Position
LG19:complement(51678279..51710815)
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AA seq
709 aa
AA seq
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MEVPSKARWTPDDVSSTPSSSGMQKSSCSSLKMFLAALSFAYFSKALSGSYMKSTITQLE
RRFDIPSYLIGVIDGSFEIGNLLVIAFVSYFGAKLHRPKIIAIGCVLMSFGTFLIAMPHF
ILGRYKFQSSVRASMNSTTTFGPCPASSAEFTQAGDKASILPSVGCEQESSVSMWIYVFL
GNVLRGIGETPVHPLGISYIDDYARSENAALYISCVQTISIIGPVFGYLLGSLCAKIYVD
IGYVNMETITITPGDARWVGAWWLGYLIAGAITLMSAVPFWFLPKSLPIPVDKQLNANFT
PEQTRFIKDSPSAMEHKFRPEEPANFHQMAKEFVPTLKSLLGSPVYITYLCVTIIQFNSL
IGMVTYKPKYIEQHYGKSASKANFLMGMVNIPAVALGMFSGGVVMKKFKLGVMGAAKFAF
GTSLLGYFLSLFFFAMGCDNAKVAGITMSYTGVEGLSYQQPSLFSECNSGCLCSGSDWDP
VCGENGITYVSPCLAGCTSSTGAGKNTVFNQCRCVAVTGAGSQPSNLTASLGHCPIRDSC
DTMFPYFLFLSVITSFIISLGGTPGFMLLIRCIKPEFKSLALGVHTLATRTLAGIPAPIY
FGAVIDTTCLKWGNTTCGRRGACRIYNTTAYRVVYLGLTMGLRSVSFFLCILGFALLRRH
VKQEEKIALTNGNVEMEFESLRKEESNNSIHSDQFVRALDCNPDRETRL
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggaggttccatctaaggcgaggtggaccccagacgacgtctcctctaccccatcatct
tcagggatgcagaagtccagttgctccagtctgaagatgttcctggctgccctgtccttt
gcctacttctctaaggccttgtctgggagttacatgaaaagtacgataacccagctggag
aggagatttgatatcccaagttatttgataggtgttattgatgggagctttgaaataggt
aacctattggtgatagcctttgtgagttattttggtgccaagcttcaccgacctaagatc
atagcgatcggatgtgtcctgatgtcgtttgggacgttcctcatcgccatgcctcatttt
attttaggacgctataagttccaatcgtcagttagagcgtccatgaattcaaccactacc
ttcggtccatgtccagcaagctcggctgagttcacacaggcaggtgacaaggcctctata
ctgccgtctgtaggctgtgagcaagagtccagtgtgtctatgtggatctatgtgttcctg
ggtaatgtgttaagagggataggagagactcctgtacatccgctgggaatctcctatata
gacgactacgccaggtctgagaatgcagccctttacattagctgtgtccagaccatatca
atcataggtcccgtctttggctacttactaggatccttgtgtgccaagatatacgttgac
ataggatacgtgaacatggagactatcaccatcaccccaggcgatgcccgctgggtgggg
gcgtggtggctggggtacctcatagccggggctatcaccctcatgtctgctgtacccttc
tggttcctgcccaagtcgctgcctattcccgtggataagcaacttaatgccaacttcacc
ccagaacagacccggttcatcaaggactctccctcagccatggaacataagtttagacca
gaggaaccggccaacttccatcaaatggctaaagaatttgttccaacattgaagagccta
ctgggaagtccagtctatataacctacctctgcgtgactattattcaattcaactctctc
atcggcatggtaacctacaagcccaaatacattgagcaacattacggaaagtcagcatca
aaagccaacttcctaatgggcatggtcaacatccctgcagtggctctggggatgttctca
gggggtgtggtcatgaagaagttcaagctgggcgtcatgggagctgctaagttcgccttc
gggacctccctgctggggtatttcctgtccctcttcttcttcgccatgggctgtgacaat
gccaaggtggctgggataaccatgtcatacacaggggtggagggtttgtcgtaccagcag
ccatctctgttctccgagtgtaactccggttgcctgtgctccgggagtgactgggaccct
gtctgtggagagaacgggatcacttacgtatctccctgtttggctggctgtacatcctct
accggagcaggcaaaaacacggtgtttaaccagtgcaggtgtgtggcggtgacaggggca
ggttctcagcccagtaacctgactgcctccctgggtcactgtccaatcagagacagctgt
gacacaatgttcccctacttcctcttcttgtctgtcatcacttccttcatcatctctctg
gggggaacgccaggcttcatgcttctcatcaggtgcattaagcctgagtttaaatccctt
gctcttggagtccacacgttggccacccggaccctggctggcatccctgcacctatctac
ttcggagccgtcatagacactacctgtttaaagtggggaaacacaacatgtggaagaaga
ggagcgtgtagaatctacaacacaacagcctacagggttgtatacctgggtctgactatg
ggcctaaggtctgtctctttcttcctgtgtatactgggcttcgctctactcaggaggcac
gtcaagcaggaagagaaaatagcattgaccaatgggaatgtagagatggagttcgagtct
ctcaggaaagaggaaagcaacaactctatccactcggaccagtttgtaagagcgctggac
tgtaaccctgacagggagacacggctttga
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