Oncorhynchus tshawytscha (Chinook salmon): 112219149
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Entry
112219149 CDS
T05605
Name
(RefSeq) membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform X1
KO
K05631
atrophin-1 interacting protein 3 (BAI1-associated protein 1)
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112219149
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Gene cluster
GFIT
Motif
Pfam:
PDZ
MAGI_u5
PDZ_6
MAGI_u1
PDZ_2
WW
Guanylate_kin
DUF6288
Tricorn_PDZ
Serglycin
Motif
Other DBs
NCBI-GeneID:
112219149
NCBI-ProteinID:
XP_024236127
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Position
LG02:23810233..23985336
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AA seq
1196 aa
AA seq
DB search
MAKVIQKKNHWTTKVNECAVLKDAPGDLNVPLLGGAENGEFAFIGQVNEDIVIYKNGKLT
EGELILEVENLSISGLPLYDVQTVINNCKGPVRLKTVRQGTKLNKDLKHYLSQRFQKSSP
DHELQQTIRDNLYRHAVPCTTRPPRDGEVPGIDYNFLPVEDFLALEQSGTLLEIGAYEGN
YYGTPKPPRQPPSGKVITSDALQDSLPGSQHSTPRRTKSYNEMQNAGIVPVDLEEDEELP
EMNSSLTGDSSEPDEHPYAPRENAPSYGVNSTLSSTTEDSQQTHIHLSHPPTEEDPLGPL
TDNWEMAYTENGELYFIDHNTKTTSWIDPRCLDKPPKPLEECEDDEGVHTEELDSELELP
TGWEKIDDPVYGVYYVDHINRKTQYENPILEAKRLKQLEQQQPPEGERYIREWIEDATLA
GAPLASYTANHQETYRDPQAGPPLPPLIGPKRGKPFFTRNPAELKGTFINTKLRKSHRGF
GFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGYTHAQVVKVFQSI
HIGSMVNLELCRGYPLPFDPDDPNTSMVTSVAIVDKEPIIVNGQDSYDSPSSHGSHTGGP
VNGMRESRPHSPSSAEVASNSSHGYLSDSVTLASSIATQPELITVHMEKGDKGFGFTIAD
SPAGGGQRVKQIVDYPRCRGLKEGDIIVEVNKRNVQSMSHNQVVDLLSKCPKGSEVSMLV
QRGGGVVPAKKSPRLQLARKDSQNSSVSSHRSTHTDSPVHTSLAPPLSKSTAPPPPSQPL
PGLPPQDPQADGTIHRKPDPFKIWAQSRSMYESRLPDFQEQDIFLWRKDTGYGFRILGGN
EPGEPIYIGHIVKYGAADEDGRLRSGDELICVDGTAVMGKSHQLVVQLMQQAAKQGHVNL
TVRRKTGYGVSKGEGEVPPSPASSHHSSTQAPSLTEGKRTPQGSQNSLNTVSSGSGSGSG
STSGIGSGGGGGSGSAVVNTALQPYDVEIHRGENEGFGFVIVSSVSRPESGTTFAGNACV
AMPHKIGRIIEGSPADRCGKLKVGDRILAVNGCSITNKSHSDIVNLIKEAGNTVTLRIIP
GDDSSNASLLTNAEKIATITTTHMPQQQAAPEPRNNTKPKQESSFEFKSPQAPPPPRPNN
TTSSPGCCVLLSGLGEGEQRFWVQPARRSRVQHGPVCAEASRGRSGHTQRQHECGR
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagtgatccaaaagaagaatcactggaccaccaaagttaacgagtgcgcggtt
ctcaaagacgctccgggtgacttgaatgtgccattgctgggcggtgcagagaacggagag
ttcgccttcatcggacaagttaacgaggatatcgttatttacaaaaatggaaaattaacg
gagggggagttgatattggaagtagagaacctatcgatctctggattgcctctgtatgat
gtacagacagtgataaataattgcaagggtcccgtcagattgaaaacagtcagacaagga
accaagctaaataaggacctgaagcactatctgagccagcgcttccagaagtcctccccg
gaccacgaactgcagcagaccattcgagacaacctctaccgccatgctgtgccttgtaca
acccgccccccacgtgacggagaggtccctggaatagattacaacttcctgcctgtggag
gactttctggctttggagcagagtgggacccttctggaaataggagcatatgaaggtaac
tattatggaacacccaagccgccaaggcagccccctagtgggaaagtgattaccagtgat
gctttgcaagacagcctcccgggctcccagcactccactccccgacgcaccaagtcctac
aatgagatgcaaaatgctggaatagtgcctgtagacctggaggaggacgaggaactcccg
gagatgaacagtagtttaacaggagactcgagtgaacctgacgagcacccctacgccccg
cgtgagaacgccccgtcctacggtgtgaacagcacattgtcatccaccacggaggactct
cagcagacacacatacacctcagccatcctcccacagaagaggaccccctgggacctcta
actgacaactgggagatggcctacaccgagaacggagagctctactttatagaccacaac
acaaaaaccacttcctggatcgacccacgctgcctggacaagcctcccaaacctctggaa
gaatgtgaagatgatgaaggggtacacacagaagagctggacagtgagctagagctgcca
acaggctgggagaaaatagatgacccagtctatggtgtttactatgtggatcacattaac
aggaagacccagtatgagaaccctatactggaggctaagcggctgaagcagctcgagcaa
cagcagccaccagaaggtgagcgctacatccgagaatggatagaggacgccacccttgct
ggtgcccctctggccagctataccgccaaccaccaggagacctacagggatccccaggct
ggacccccactgccgcccctcatcgggcccaaacgagggaagcccttcttcacgcggaac
ccagcagagctaaagggaaccttcatcaacaccaaactgaggaagagccaccgggggttc
ggcttcaccgttgtcgggggcgacgagcctgatgagtttcttcagatcaagagtctggtt
ctggacgggcctgctgccctcgacggcaagatggagacaggtgacgtgatcgtgagtgtc
aatgacacatgcgtgctaggctacacccacgcccaggtggtgaaggtcttccagtccatc
catattggctccatggtcaacctagagctgtgccgcggctacccccttccttttgacccc
gacgaccccaacaccagcatggtgacctccgtggccattgtggacaaggagcccatcatc
gtcaatggccaggatagctacgactccccgtccagccacggcagccatactgggggcccc
gttaatggcatgagggagtcgagaccacacagtccctcctccgccgaggtggcgtccaac
agctcgcacggttacctcagcgactctgtgacgctggcgtcatccatagcgacgcagccg
gagctgatcacagtgcacatggagaagggagacaaaggctttggattcaccatcgcagac
agccctgcagggggaggacagagggtcaaacagatagtggactacccccgctgcaggggc
ctgaaggagggggacattatcgtagaggtgaacaagaggaacgtccagagcatgagccac
aaccaagtggtggacctgctcagcaagtgccccaaaggaagtgaggtcagcatgctggtg
cagagaggcggaggggtggtacctgcaaagaagagtccaaggctgcagttagcgaggaag
gacagtcagaacagttctgtgtccagccaccggagtacccacactgactcccctgtgcac
acgtccctggccccccctctcagcaagagtaccgcccccccacccccttcccagcccctg
cccggcctgcctccccaggacccccaggcagacgggaccattcacaggaaaccagacccc
ttcaagatctgggcccagtccaggagcatgtatgaaagtaggctgcctgacttccaggag
caggacattttcctgtggagaaaggacacgggctacgggttcaggatcctgggagggaac
gagccaggagaaccgatctacatagggcacatagtgaagtatggggcggcggatgaggat
ggacgcctgcgttcaggggatgagctcatctgtgtggacggcacggcagtgatgggcaag
tctcaccagctggtggtacagctgatgcagcaggccgccaagcagggtcacgtcaacctc
actgtgcgacgcaagactggctacggagtgtctaaaggggagggcgaggtgcccccgtcc
ccagcctcgtcacaccacagcagcacccaggccccctccttgactgaggggaagcggacc
ccccagggcagtcagaactccctcaacacggtcagctctggcagcggctctggcagtggc
tccaccagcggcatcggcagcgggggcggcggaggctcagggagtgctgtggtcaacacc
gccctgcagccctacgacgtggagatccaccgcggggagaacgagggctttggattcgtc
atcgtctcctccgtttcccgacctgagtctggcaccacctttgctggaaatgcatgtgtg
gccatgccccacaaaatagggcgtattatcgaggggagccctgcggaccgctgtgggaag
ctgaaggtgggagaccgtatcctggccgtcaacggctgctccatcaccaacaagtcccac
tcggacatcgtcaacctgatcaaggaggccgggaacaccgtcactctgaggatcattcct
ggagacgactcctctaatgcatcactactgaccaacgctgagaagatcgccactataaca
accactcacatgccccagcaacaggctgcacctgaacccagaaacaacaccaaaccaaaa
caggagtcctcttttgagttcaaatcccctcaggcccctcctcccccccgccccaacaac
acaacctccagcccaggatgctgcgttctactcagtggacttggagagggagaacaaagg
ttttgggttcagcctgcgaggaggtcacgagtacaacatggacctgtatgtgctgaggct
agccgaggacggagcggccatacgcaacggcaacatgagtgtgggagatga
DBGET
integrated database retrieval system
