Oncorhynchus tshawytscha (Chinook salmon): 112219343
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Entry
112219343 CDS
T05605
Symbol
smyd1a
Name
(RefSeq) histone-lysine N-methyltransferase Smyd1
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00310
Lysine degradation
otw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
112219343 (smyd1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112219343 (smyd1a)
Enzymes [BR:
otw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
112219343 (smyd1a)
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
112219343 (smyd1a)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
112219343 (smyd1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SET
zf-MYND
TPR_12
DUF7490
Motif
Other DBs
NCBI-GeneID:
112219343
NCBI-ProteinID:
XP_024236274
UniProt:
A0A8C8F0H1
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Position
LG20:18750543..18770288
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AA seq
516 aa
AA seq
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MHFSQHFLPLPLFFFCEVFQSSIHLVMTLDMDNVEVFDTGVKGRGLRTTKDLCAGEVVLA
EPSFAAVVFDSLSQQVCHSCFRRQANLHRCAQCKFAHYCDRTCQTACWDEHKQECGAIKK
NGKAPNENVRLAARVLWRIQKDTGIVSDSQLTSVDQLEDHVADMPADNLKELKIDVHKYL
DYCPNTRHGVEYISHIFGIINCNGFTLSDQRGQQAVGVGLFPNLCLVNHDCWPNCAVILN
HGNQSALNATFHSKRRVELRALGKIAENEELTVGYVDFLNVSTDRQRALKHQYHFDCTCK
SCSKNLKDDLMMAAKETEGNKPSDELVKEVQELSLECLAKVEAARTAGDFHEVVKLCREC
LDKQEPVLADTHLYQLRMLSAASEVLSYLKFFSEAAEYSRRMVEGYMKLYHPNNAQLGMA
TMRAGVTHWHAGLIEVGHGMICKAYAILMITHGPNHSITKDLESMRMQTEMEQRIFKQNE
CVYHSMREAALQNKSMGMMAEAVSVEDNVKALFHKQ
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgcacttcagccagcactttcttcctctcccactcttttttttctgtgaggtgttccag
tcttctatccacttggtaatgaccctggatatggacaatgtggaggtgtttgatactggg
gtaaagggcagaggcctcaggaccaccaaggacctctgtgctggggaggtggtactcgct
gagcccagcttcgctgcagtggtcttcgacagtctgtctcagcaggtgtgtcacagctgc
ttccgtcgccaggccaacctccaccgctgcgcccagtgtaagtttgcccattactgtgac
cgcacctgtcagactgcatgctgggacgagcacaagcaggagtgtggtgccatcaagaag
aacggaaaggcccccaatgagaatgtccgtcttgctgcccgtgtgctgtggcgcatacag
aaggacacaggcattgtgtcggacagccagctgacctcagtggaccagctggaggaccac
gtggccgacatgcccgccgacaacctcaaagagctcaagatcgacgtgcacaaatacctg
gactactgtcccaacaccaggcatggcgtggagtacatctcacacatctttggcataatc
aactgtaatggttttactctgagtgaccagaggggtcagcaggcagtgggagtaggtctg
ttccctaacctgtgtctggtcaaccatgactgctggcccaactgtgctgtcatcctcaac
catggcaatcagtcagctctgaatgcaaccttccactctaagaggagggttgagctgcgt
gcgcttggtaagattgctgagaatgaggagctgacagtgggctacgtggacttcctgaac
gtgtcaacggaccgccagagagccctgaagcaccagtaccactttgactgcacctgcaaa
agctgcagcaagaacctcaaagatgacctaatgatggctgccaaggagaccgaaggcaac
aagccctctgatgagcttgtgaaagaggtacaggagttaagtttggagtgcctggccaag
gttgaggcggctcgtactgcaggtgactttcatgaggtggtgaagctgtgtcgtgagtgt
ctggacaaacaggaacctgtgttggcagatacacacctgtaccaactgcgtatgctgagt
gcagccagcgaggtgctgtcctacctgaagttcttctctgaggctgcagaatactcacgc
aggatggtggagggatacatgaagttgtaccaccccaataacgcccagttgggcatggcc
accatgcgggctggcgtgactcactggcacgcagggctcatcgaggtgggccatggcatg
atctgcaaggcctacgccattctcatgatcacacatggacccaaccactccatcaccaag
gacttggagtcaatgcgtatgcagaccgagatggagcagaggattttcaagcagaatgag
tgcgtctaccacagcatgagagaggctgccctgcagaacaagtccatgggcatgatggct
gaggcagtcagtgttgaggacaacgtcaaggccctcttccacaagcaatga
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