Oncorhynchus tshawytscha (Chinook salmon): 112219360
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Entry
112219360 CDS
T05605
Name
(RefSeq) general transcription factor 3C polypeptide 4 isoform X1
KO
K11310
general transcription factor 3C polypeptide 4 [EC:
2.3.1.48
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
otw03021
]
112219360
03036 Chromosome and associated proteins [BR:
otw03036
]
112219360
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
112219360
Transcription machinery [BR:
otw03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
112219360
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
112219360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIIC_delta
DUF5921
zf-TFIIIC
YgfZ_barrel
Motif
Other DBs
NCBI-GeneID:
112219360
NCBI-ProteinID:
XP_024236306
LinkDB
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Position
LG20:18125651..18131763
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AA seq
766 aa
AA seq
DB search
MAACSPARVADGVEEGQLTEAEPEDDSWAELGPVVKRDPVIKLSSPVSGFEPLTWSEDHR
LSASTASGISLMEVLCDVHGNNQDLVLHRTSIPVPDKVCELKVGPEEELLRAKDKFASDP
SVSQSLLDRVFNPTLGVHKGIMYTSWSPLGCDGNGLSLLASLTLDHKLTVHSSTKRLQWT
VVADLTQLYGESLESRGYSVHGGEPPKANLLDLAELQRRYLMQTPVRMEWSSVCTTQHVQ
TNNKWKDVGTVLLAVLMENGDLVVWQFCLPMLGKDSVVSCNTIQSGVSSPSVLAWWEYEH
SGRKMSGLIVGSAVGPVKILPVNLKAVKGYFTLRQPVVLWQESDQIPVHNIKCISLFHPK
QNCNCSLVVAARGSYLFWCLLLISKAGLNVHNSHVTGLHSTPIVSMTASRQGGSIYTCSL
DGTVKKLTPIFTDMAVAFKQEEIGLPEGMAGQRMHGIAVSPNGAYLALVSTAGMTNGQHL
VSRMYQVQFVTLKTPNDAAAELLESQVQSLFKQTDLLDLVRWKVLKEKCIPALLQEELDK
KVHNTGSPYLWRLKLFLVRVLYQSLQKAPVEARWHPTHEDSKVFVGNEEGGGGGEEGVSK
LQDPESQALEEKMGEVIAWIEAVEAHLTREHMKRVLGEVYLHTWITENTSIPTRGVCDFL
TSDPTYEDRAAKVLIGHIQKKMNKQTFPEYCSLCKEVLPFTDRKQAICSNGHMWLRCVLS
YQACQTLTYRRCLLQDSIARLPVPEDPDWIKRILRGPCTFCDSPLL
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttgcagcccagctcgtgttgctgacggggtagaggaaggacaacttaccgaa
gccgaaccagaggatgattcctgggcagaactcggtccagttgtgaagagggatccggta
ataaagctctctagtccggtcagcggttttgagccgctcacgtggtctgaggaccaccga
ctctcggcctctactgcaagtggcatttctttgatggaggtcttgtgcgatgttcacggc
aacaaccaagacttggtgctgcatcggacctccatccccgtgccggacaaagtatgtgaa
ttgaaggtgggtccagaggaggagctgttgagggccaaagacaagttcgccagcgaccct
tcagtgagccagtccttgctggacagagtgttcaaccccaccttaggcgtccataagggc
atcatgtacaccagttggtcccccctgggctgtgacggcaatggcctcagccttctggcc
tccctcaccctggaccacaagctgaccgtccacagcagcaccaagcgtctacagtggaca
gtggtggctgacctgacccagctgtatggagagagcctggagagtagaggctactcagtg
catggtggggagccccccaaggctaacctcctggacctggctgagcttcagagacgctac
ctcatgcagacccctgtacggatggagtggtccagtgtgtgcaccacgcagcacgtccag
accaacaacaagtggaaggacgtggggacggtgctgctggccgtgctgatggagaacgga
gacctggtggtgtggcagttctgcctgcccatgctggggaaggattcagtggtgtcctgt
aacaccatccagtctggggtgtcgtctcccagtgtgctggcatggtgggagtatgagcac
agcgggcgcaagatgagcggactgatcgtgggcagtgcggtagggcctgtcaagatcctg
cctgtcaacctgaaggcggtgaagggctacttcaccctgcgccagccagtggtcctctgg
caggagtcagaccagatccctgtacacaacatcaagtgtatctccctgttccaccccaaa
cagaactgtaactgtagcctggtggtggcggccaggggctcctacctcttctggtgcctg
ctgctcatctccaaggcgggcctcaacgtgcacaactcacacgtcactggcctgcactcc
actcccatcgtctccatgacagccagccgccaggggggctccatctacacctgttccctg
gatgggactgtcaagaagctcacgcccatctttaccgacatggccgtggcctttaagcag
gaggagatcgggctgccagaaggcatggcagggcagaggatgcatggcatcgcggtaagc
ccgaacggggcctacctggccctggtcagtactgcagggatgaccaatggtcagcacctg
gtctccaggatgtaccaggtccagtttgtgaccctgaagacgccaaacgacgcggcggct
gagctgctggagtcccaggtccagagcctgttcaaacagactgacctgctggacctggtg
cgctggaaggtactgaaggagaaatgcattcctgctctgctgcaggaggagctggacaag
aaggtacacaacacaggctccccctacctgtggaggttaaaactcttcctggtgcgcgtg
ctctaccagtccctgcagaaggcccccgtggaggcacgctggcaccccacacatgaagac
tccaaggtgtttgtggggaatgaggaggggggtggaggaggggaagagggggtgtcgaag
ctacaggacccagaatcccaggcgttggaggagaagatgggagaggtgatagcgtggatt
gaggcggtggaggcccacctgaccagggagcacatgaagagggttctgggggaggtgtac
cttcacacctggatcacagagaacaccagtatccccaccaggggggtctgtgacttcctc
accagtgaccctacatacgaggacagggctgccaaggtcctgataggtcacatccagaag
aagatgaacaagcagacgttcccagagtactgtagtctgtgtaaggaggtgctaccgttc
acagaccgcaaacaggctatctgctccaatggacacatgtggctcaggtgtgtgttatcc
taccaggcgtgccagacactcacgtacagacgctgcctactgcaggatagcattgccaga
ctgccagtgcctgaggacccagactggatcaagaggatactgcggggtccttgtacattc
tgcgactctcctctcctctag
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