KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112219369
Entry
112219369         CDS       T05605                                 
Symbol
vsig8a
Name
(RefSeq) V-set and immunoglobulin domain-containing protein 8a isoform X1
  KO
K06788  coxsackievirus and adenovirus receptor
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03267  Virion - Adenovirus
otw04514  Cell adhesion molecule (CAM) interaction
otw04517  IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03267 Virion - Adenovirus
    112219369 (vsig8a)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    112219369 (vsig8a)
   04517 IgSF CAM signaling
    112219369 (vsig8a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:otw04515]
    112219369 (vsig8a)
Cell adhesion molecules [BR:otw04515]
 Immunoglobulin superfamily
  CTX family
   112219369 (vsig8a)
SSDB
Motif
Pfam: V-set ig Ig_3 I-set Ig_2 Ig_PDGFR_d4 Ig_C17orf99 Syndecan
Other DBs
NCBI-GeneID: 112219369
NCBI-ProteinID: XP_024236322
LinkDB
Position
LG20:16262608..16270886
AA seq 421 aa
MSDVHSGSFCKEGVFSHIVPPQTGTLRTPCHVLIYFSSRAPQRAMYFRSIAVCACLFNVA
MVQNVYPCIPSPRPWSSMIGICAITVFLNAAGSMGMQLTSTGPQTVQRAQGERMTLVCTY
TPDPSDTGELDIEWSVVSPDTTQKDQLLLSYAGGNKYVHGNPGLTKGLDFAAGDPSLGDA
SLSIAFLSPAHSAIYQCKVKKSPGVDMQKVSLVVMVRPSVPKCWVEGEAAVGETVSLHCK
SSEGSSPLNYAWKREGGGPIPPSATQNRVTGELLISNHSQSFVGIYMCEVTNAVGDERCR
VKLTANKPPNRAGVIVGTVVGCLLLIIILAILIWLLIYKCDARFTRYEKEVSNDIREDVP
APESRPHSRGSSRGASLHPGVAYSQVGMQQTGHSDRGHTHIPSSSTGYTPVKYDSRYGFA
V
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgagcgacgttcattcaggttcattttgcaaggaaggtgtgttttcacatattgtccct
ccacaaaccgggacgctcagaacaccatgtcatgtgctcatctatttttcaagcagggca
ccacaaagagctatgtattttcgaagcattgctgtatgtgcttgtctgttcaatgttgcc
atggttcaaaatgtctatccatgcattcctagccctcgcccatggtcttccatgatcggg
atatgtgcaatcacagtttttctcaatgcagctggcagcatggggatgcagctgacctct
actggtcctcagaccgtccagagggcccagggggagagaatgaccctggtgtgtacatac
acacctgacccctcggacactggagagctggatattgagtggtcagtggtcagcccagat
accacccagaaggaccaactgctgttgtcctatgcaggtgggaataagtacgtccatggt
aaccctggtctaactaaggggctggactttgctgctggtgacccttccctgggtgatgcg
tccctctccatcgctttcctgtcaccagcccattctgccatctaccagtgtaaagtcaag
aagtcaccgggagtggacatgcagaaagtgtccctggtcgtgatggtgcgtccttcggtg
cctaaatgctgggtggagggtgaggcggcagtgggggagactgtctccctgcactgcaag
tcatccgaggggtcctctcccctcaactacgcatggaagagagaaggaggaggtcccatc
ccaccctcagccacacagaaccgtgtgactggggagttgttgatcagcaatcactctcag
agctttgtggggatttacatgtgtgaggtgaccaatgctgtgggggacgagaggtgcaga
gtcaaactgacagctaacaaaccccctaacagagcaggagtgatagtgggtactgtggtg
ggttgtctactgctcatcatcattctggcgatactcatatggctcctcatctacaagtgt
gatgcaaggttcacacgctatgagaaggaagtgtctaacgatatcagggaggacgtccca
gccccagagagccggccacacagccgaggcagcagccggggcgcaagcctccaccctggg
gtagcctacagccaggtgggaatgcaacagacggggcactcagatcgaggacacacacac
atcccatccagcagcactggatacacacctgtcaaatatgacagcagatacggcttcgct
gtgtga

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