Oncorhynchus tshawytscha (Chinook salmon): 112219470
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Entry
112219470 CDS
T05605
Name
(RefSeq) scavenger receptor class F member 2
KO
K24319
scavenger receptor class F member 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112219470
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Laminin domain-containing proteins
Laminin EGF-like domain-containing proteins
112219470
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_PEAR1L
EGF_2
EGF_Teneurin
EGF_C8A_B_C6
EGF_STAB1-2
Motif
Other DBs
NCBI-GeneID:
112219470
NCBI-ProteinID:
XP_024236506
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Position
LG20:12881913..12891445
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AA seq
897 aa
AA seq
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METRYVLVIVLLSVFCCWTYSQELNPSGRNVCKTESDRLQCCSGWAQQGDECLIPICEGN
FTCKENEVCVRPHECRCRHGYFGATCDMKCPFKFWGPDCKGKCDCHPNGRCDDVTGACTC
NPNRWGPNCERACDCQQGQCNQETGACMCYPGYWGPQCSNNCYCRVNSMCDVGTGQCHCH
PGWYGRYCGAKCACNGSPCDQLTGRCKCREHLWGTHCEHKCQCLQGRCNPADGSCTCKPG
FRGKFCRETCPAGFYGQNCRNRCGHCKGQQPCKVAEGHCIACESGWNGTRCDQMCAPGFF
GENCEDVCSSCKDGHFCNRIDGKCPHCNPGWMGDRCEVKCPNGTYGENCVNDCNSCFNGM
CHFATGNCLCNPGFSGAYCNVSCSAGQYGLNCTQTCSCHDNNCNIVTGACNLQPNQRMGV
MAAGVLVTCLLLLSLLCCCCVCRQNDPEKRSKRRLCGGFTRISSKLPHIPLRRQKLPNVV
VSHHDPENTFNCSFIESPSAVEQPTASGSSRASFSSVETTEDGHVYAVPDENKKKGDRIN
TTETTVLADDDVSEVDTLPEDRDMTEQASVNTSELPLQKSSESEGSCSGTESATSTLCLR
VSAPQPAQQSSKEPENNGGSNNVKYNGKPIAAERIKPQPPDPSTKPKLSWIHASPGPNQN
QISQEETVAEDNICSRKKASKQRAPNAPESAGTDGASSLGEKKPNKSRPGLLQIEHINGA
VQSVLRKMGNFRVDRKAAIPKESPEKRPSLSLNREVNQPNIHSEVASLLTAQLKEKTQSL
NRSEASSCEESLSHLQAQRKKPTPPQKTSGTQPGAGKDLLPTSDSSQKPLPDSPSKEAKY
QDKQDSNNSESSSDKGEPKNKTPMKKPPRKKSKEGNVDSKIQTTAPKVAVMPPKASN
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaagatatgtcttagtcattgtgcttctaagtgtcttctgttgttggacttac
agccaagaactaaatcccagcggcagaaatgtatgcaaaactgaatctgacaggctccaa
tgttgtagtggctgggcacaacaaggagatgagtgcttaataccaatttgtgagggtaac
ttcacctgcaaagaaaatgaagtttgtgtgcgaccccacgaatgccgctgtcgtcatggt
tattttggagccacttgtgatatgaaatgtccatttaagttctgggggcctgactgcaag
ggtaagtgtgattgccatcccaacgggaggtgcgatgatgtcactggggcctgcacctgt
aaccctaatcgttgggggccaaactgtgagcgagcctgcgactgccagcagggccaatgc
aaccaggagacaggcgcttgtatgtgctacccaggctattggggccctcagtgctctaac
aactgttactgcagagtaaactctatgtgtgatgtgggaactggtcagtgccactgccat
cctggctggtatgggaggtactgcggtgccaagtgtgcctgcaatggctctccgtgtgac
cagctcaccggtcgctgcaagtgtcgagagcatctgtggggtactcactgcgagcacaag
tgccagtgtctccaaggacgctgtaacccggcggatggatcgtgcacctgcaagccagga
ttcagagggaagttctgcagggagacgtgtccagctggattctacggacaaaattgcaga
aacaggtgtggtcactgcaaaggccagcagccctgcaaggtggcagagggacattgcatc
gcatgtgaaagcggttggaatggcaccaggtgtgaccagatgtgtgctcctgggttcttt
ggtgaaaactgcgaggacgtttgctcatcctgtaaagacggacacttctgcaaccgcatc
gacggaaaatgcccccactgcaaccctggttggatgggtgatcgatgtgaggtcaagtgt
ccaaatggaacctatggagagaactgtgtcaatgactgcaacagctgcttcaatgggatg
tgtcacttcgccacaggaaattgtctctgtaatcctggcttctctggtgcctactgtaat
gtgagctgttcagcgggtcagtatgggcttaactgtacccagacctgttcctgccatgac
aacaactgcaacatagtgactggagcatgcaacctacagcctaaccagaggatgggtgtg
atggcagcaggggtgctggtcacctgtctcctgctcctctccttgctgtgttgctgctgc
gtctgcagacagaatgaccctgagaaaaggtccaaaagaagactatgtggagggttcaca
cgaatcagctctaaacttcctcatatcccactgagacggcagaagctacccaacgttgtt
gtgtcccaccatgaccctgagaatactttcaactgtagtttcattgagtccccctctgca
gtggagcaacccaccgcctccgggtcatccagagcgtccttctcttccgtagagaccaca
gaggacggacatgtctatgctgtgcctgacgagaacaaaaagaaaggggacagaatcaac
acaacagagactacagtcctagctgatgatgatgtctctgaggtagacacattgccggag
gacagggatatgactgagcaggcttcagttaacaccagtgagctgccactccagaagtca
tcagagagtgagggctcctgcagtggcacagagtcagccaccagcaccctctgcctcagg
gtctctgcccctcagccagcacagcagtccagcaaggagccagagaacaatggcgggtca
aacaatgtcaaatataatggaaagcctatagctgctgagaggattaaaccacagccacca
gacccctccaccaagcccaagctctcatggatccatgcatctcctgggccaaatcagaat
cagataagtcaggaagagactgtggctgaggataacatttgttccagaaagaaagccagc
aagcagcgagctcccaacgccccagagtctgcaggtacagatggggccagctccctaggt
gagaaaaagcctaataaaagcagaccaggtctgttgcagatagagcacatcaatggggca
gtgcagagtgtcctgaggaaaatgggcaatttccgtgttgaccggaaagctgcaatcccc
aaagagtccccagagaagaggcccagcttatccctaaacagggaggttaaccaaccgaac
atacactctgaggtagcctctctcttaactgctcagctgaaggagaagactcagagcctg
aacaggagcgaggccagcagctgtgaagagagcctgtctcacctccaggcccagagaaag
aagcccaccccgccccaaaagacctcgggcacccagcctggagctggaaaggatttgctt
cccacatccgacagctcacagaagcctctgccagatagtccatctaaagaagccaaatac
caagataaacaagactctaacaactctgaaagcagctcagataagggagaacccaaaaat
aagaccccaatgaaaaagcctcctcggaaaaagagcaaggaaggtaatgtagactcaaaa
atacagactacagctccaaaggttgcagtgatgccaccaaaggcttcaaattag
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