Oncorhynchus tshawytscha (Chinook salmon): 112219472
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Entry
112219472 CDS
T05605
Name
(RefSeq) reticulon-4 receptor
KO
K16659
reticulon-4 receptor
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
otw00537
]
112219472
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
otw00537
]
Receptors
112219472
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_9
LRR_14
DUF4292
Motif
Other DBs
NCBI-GeneID:
112219472
NCBI-ProteinID:
XP_024236508
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Position
LG20:complement(12783849..12819047)
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AA seq
470 aa
AA seq
DB search
MKSVFIRVGELYILILWLQLVPPIEGRVEGCPAPCICHSEPRPTLACQQQGLYSIPTEIP
VHSQRIFLQNNKLTVVRSTSFSPCRNLTVLWLYSNNISHIEAGAFYGLERLEELDIGDND
LRIISPTAFRGLSRLHTLHLHRCGLSELPVGVFRGLFSLQHLYLQDNSLLTLHDDTFLDL
ANLTYLFLHNNKIKTVTDHMLRGLVSLDRLLLHQNLVTFVQRKAFHDLRKLTTLFLFFNN
LTVLTGETMDPLVSLQYLRLNGNQWICDCRARTLWDWFKGFKGSSSELECHVPARLAGKD
LKRLKSPDLEGCYESSQHTWVSVFSSKARSGKLTTESPLRAGIPRCCLSDNDKSSIISSK
GLPDQSSYNSRQITNNPLKEKENISKTKLMEADPNEPQNKESLNDGPGGTLSNNLDHSSE
DLDPSNDPEKKKMCTKENISDSLCLKSQGSTIGAWRLIILLLFWLSLDFC
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccgtttttatccgagttggcgaactctacattctgatcctctggcttcaatta
gtgcctccgatagagggtcgagtggagggctgcccagcgccatgcatatgccacagcgag
ccacggcccaccctggcctgccagcagcagggcctctactccatccccacagagatccct
gtccacagccaacgaattttcctccagaacaacaagctaactgtggtgcgctccaccagc
ttcagcccctgcaggaaccttaccgtcctctggctctactccaacaacatcagccacatt
gaggccggggccttttacggcctggagaggctggaggagctggacataggggacaatgat
ttaaggatcatcagccccacagctttcagaggcctctccagactgcacaccctgcatctg
cacaggtgtggcttgtctgagctgcctgtgggtgtgtttaggggactcttttccctgcag
cacctctatctccaggacaacagtttactaactctgcatgacgatacgtttctggacctg
gctaacctgacctacctgttcctccacaacaacaagataaagactgtgacggatcacatg
ctgcgcggcttggtaagcctggatcgcttgcttctccatcagaatctagtgacctttgtc
caacgcaaggcatttcatgacctgcgcaagctgaccactttgtttctgttcttcaataat
ttaacagtgttgacaggggagaccatggacccattggtgtccctccagtacctgcgtctg
aatgggaaccagtggatctgtgactgccgggccaggaccctgtgggactggttcaagggc
ttcaaagggtctagctcagagcttgagtgccatgttccagccagactggctgggaaagac
ctgaaacggttaaagagccctgacctggagggttgttatgagagctctcaacatacttgg
gttagtgtgttcagttctaaggctcgctctggaaaactcaccacggagagtccacttagg
gctggtattcctaggtgctgcctctcagacaacgacaaatcctccatcatctccagtaag
ggtcttccagatcagtcctcctacaacagcagacaaatcaccaacaatcctctgaaggag
aaggaaaacatctccaaaactaagcttatggaagctgaccccaacgaaccccagaacaaa
gagagcctgaacgatgggccaggaggaacattatctaacaatctggaccattcatcagag
gatctagatccctccaatgaccctgaaaaaaagaaaatgtgtacaaaggagaacatttca
gactctctgtgtctcaagtcccaaggatctacaatcggagcatggaggcttatcattctt
cttttgttttggctatccttagacttctgttag
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