Oncorhynchus tshawytscha (Chinook salmon): 112219477
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Entry
112219477 CDS
T05605
Name
(RefSeq) protein transport protein Sec61 subunit alpha
KO
K10956
protein transport protein SEC61 subunit alpha
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03060
Protein export
otw04141
Protein processing in endoplasmic reticulum
otw04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
112219477
04141 Protein processing in endoplasmic reticulum
112219477
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112219477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112219477
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
otw02044
]
112219477
Membrane trafficking [BR:
otw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
SEC61 complex
112219477
Secretion system [BR:
otw02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
112219477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
Plug_translocon
DUF6608
DUF2975
Motif
Other DBs
NCBI-GeneID:
112219477
NCBI-ProteinID:
XP_024236531
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Position
LG02:22080945..22089384
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AA seq
476 aa
AA seq
DB search
MGIKFLEVIKPFCALLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD
PFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG
MIITIGQSIVYVMTGMYGDPSEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGIS
LFIATNICETIVWKAFSPTTVNTGRGTEFEGAIIALFHLLATRTDKVRALREAFYRQNLP
NLLNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSN
LYVISQMLSTRFSGNFLVNLLGTWSDTSTGGPARAYPVGGLCYFLSPPESFGSVLDDPIH
AAIYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMGGHRETSMVHELNRYIPTA
AAFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQSEMGSMGALLF
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgggcataaaatttttggaagtcataaagccgttttgtgcgttattacctgagattcag
aaaccagagagaaagattcagttcagagaaaaagtgctatggactgccatcacgctcttc
atcttcctggtgtgctgccagattccactcttcggcatcatgtcctcagactccgcagat
cccttctactggatgagagtaatcctggcctccaacagaggtactctgatggagctgggt
atctcacccatcgttacctccggtctcatcatgcagctgctggctggcgcaaagatcatt
gaggttggagacacccccaaggacagagcactcttcaatggagcgcagaaattgtttggc
atgattatcaccattggacagtccattgtgtatgtgatgacgggcatgtacggagaccca
tcagagatgggtgctgggatctgcctgctcatcatcattcagctttttgtggcaggtctg
attgtgctgctgctggatgagctgctgcagaagggctatgggctgggctctggtatctcc
ctgttcattgccactaacatctgtgagaccattgtctggaaggctttcagccccactact
gtcaacactggcagaggaacggagtttgaaggtgccatcattgccctgttccacctgttg
gccacccgcacagacaaggtgcgcgccctgagagaggcattttaccgccagaacctgcct
aacctcttgaacctcatcgccactgtcttcgtctttgctgtagtgatatacttccagggc
ttcagggtggacctgcccatcaagtctgcccgttaccgtggccagtacaacacctatccc
atcaagctcttctacacctcaaacattcccatcatcctccagtctgccctcgtgtccaac
ctgtatgtcatctctcagatgctctccacgcgattcagcggcaacttcctggttaacctg
ctgggaacctggtctgatacttccactggaggaccagctcgtgcctacccggttggaggt
ctctgctacttcctctctcccccggagtcctttggttctgttctggatgaccccatccat
gctgccatctacatcgtcttcatgctgggctcctgtgccttcttctccaagacatggatc
gaggtttcgggatcctctgccaaagatgtggctaagcagctgaaggaacagcagatggtg
atggggggacacagagagacctccatggtgcatgagctcaacaggtacatccccacagct
gcagccttcggtggcctatgtataggtgggctgtctgtcatggctgacttcctgggtgcc
atcggttcgggtactggaatcctattggctgtcaccatcatctaccagtactttgagatc
ttcgtcaaggagcagagtgaaatgggcagcatgggcgcgctgctattctag
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