Oncorhynchus tshawytscha (Chinook salmon): 112219505
Help
Entry
112219505 CDS
T05605
Symbol
myo5b
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
112219505 (myo5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112219505 (myo5b)
04131 Membrane trafficking [BR:
otw04131
]
112219505 (myo5b)
03029 Mitochondrial biogenesis [BR:
otw03029
]
112219505 (myo5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112219505 (myo5b)
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
112219505 (myo5b)
mRNA cycle factors
P-body specific factors
112219505 (myo5b)
Membrane trafficking [BR:
otw04131
]
Others
Actin-binding proteins
Myosins
112219505 (myo5b)
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
112219505 (myo5b)
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
112219505 (myo5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_22
Myosin_N
Ac76
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
112219505
NCBI-ProteinID:
XP_024236582
UniProt:
A0A8C8JB97
LinkDB
All DBs
Position
LG20:complement(11093644..11176853)
Genome browser
AA seq
1841 aa
AA seq
DB search
MKRQVKEHSNIMKRQEGKIDHELYCKYTRVWIPDPEDVWRAAEIIKDYKEGEPILHLKLE
DESPLEYRIGPKDNPLPFLRNPDILVGENDLTALSYLHEPAVLHNLKVRFLEPNHIYTYC
GIVLVAINPYDQLQIYGEEVINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSG
ESGAGKTVSAKYAMRFFATVGGSANDTNVEEKVLASSPIMEAIGNAKTTRNDNSSRFGKY
IQIGFDRRYHIIGANMRTYLLEKSRVVFQAEDERNYHIFYQLCASASFPEFKDLALTSAE
DFIFTSQGENIFIEGVNDAEDFKKTKEAFTLLGVKESNQSSIFRIIASILHLGNVEICSE
RDGDSCHISRNDPHLTHFCRLLGVELEQMEHWLCHRKLVTTSETYVKNMSRKQAANARDA
LAKHIYAHMFDWIVEHVNKSLHTSSKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQ
QQFNQHVFKLEQEEYMKEQIPWTLIDFYDNQPCIDLIEAKLGILDLLDEECKVPKGTDQN
WCQKLYDRLSSSVHFQKPRMSNISFIIIHFADKVEYQCDGFLEKNRDTVYEEHINILKAS
KFQLVADLFQDTNKDGSSSTSSSSKSSRINVRSAKPTPKVPNKEHRKTVGHQFRSSLQLL
METLNATTPHYVRCIKPNDEKEAFSFDSRRAVQQLRACGVLETIRISAAGYPSRWTYPDF
FNRYRVLMKKSDMTVGDKKLVCRNLLETLVKDPDKFQFGKTKIFFRAGQVAYLEKLRADK
FRSACIKIQKTVRRWLQMVRYKKIRKSAITLQRFGRGYMARRYAERLRLTRAAVICQKQY
RMVRERTAYLRVRQAVVTIQAFTRGMFTRRIFQEFLLHHKAMIIQKHVRGWLTRRKFKVA
RNAAITIQCAYRRMRAKRELKQLKIEARSAQHLKKLNTGMENKIVQLQRKMDDQTKDLKT
QNEQLVVAKASLGSEVNKLQKELETMRSRQGDGSQLTSMKDELEKLRAELQEAHAHRKKL
EEEHGNEKMRFEQRVEELERENSLLKSEKEKMNQRILHHSKSTEDQESSASQSVGRVQAE
LDEERQRYQNLLREFSRLEQRYDNLQEAKFQPGHRRNNSNQSSLESDSNYPSISTSEVGD
TDDAIQLVEEMGVEKAAMDIGVFMKLQKRVRELEQERKRLQVNLEKMEDQSKRKGIEPKM
TSEQENADLAYNSLKRQELESENKKLKNDLNELRKAIADRASKNSSSNELQDGYNLLLGQ
LKAANEELDVRKEEVLILRSQIVTAAQQKEKDTTNHIETNNLPEWTNSKKPIDKEEALRS
YHGLCESKKLLEAQLQSQARKHEDELEAFHTQIELLRDDIEKKQEMLNHTMSLSPEAQVE
YSIQQEITRLTNDNLDLKELVEKLEKNERKLKKQLRIYMKKVQELEVSVTAAASQSTTAK
PEMTRQVTVQRREKDFEGMLEYYKEDEALLVKTLITDMKPHAVSATVPCLPAYILFMCIR
HADYINDDQKVHSLLTSTINAIKKVLKKNNDDFEMTSFWLANTSRLLHCLKQYSGDEAFM
TQNTAKQNEHCLKNFDLAEYRQVLSDLSIQIYQQLVKVAEHVMQPMIVSAMLESESIPSL
AGVKPMGYRNRSSSMDKDEEGPGSYTLEALIRQLGQFHGVMGEHGLDPEIAGQVIRQLFY
SINAVTLNNLLLRKDVCSWSTGMQLRYNISQMEEWLRGKNLHQSGAVINMEPVIQAAQLL
QVKKKTSQDAEAICSLCTALTMQQIVKILNLYTPLNEFEERVTVSFIRNIQNRLQERNDV
PMLLVDTKHTFPVLFPYTPSALSLETLHIPANLSLHFLTRV
NT seq
5526 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggcaagtgaaggaacatagcaacataatgaagagacaagaggggaagattgac
catgaactttactgcaagtacactcgggtgtggatcccagacccagaggatgtatggaga
gctgcagagatcatcaaggactacaaggagggagagccaatcctgcacctcaaacttgaa
gatgaatcgccgttggaataccgcatcggacccaaagacaaccctcttcccttcctccgg
aaccctgatatcctggtgggggagaatgacctcacagcgctcagctaccttcacgagcct
gctgtcctgcacaacctcaaagtgcgcttcctcgagcccaaccacatctacacatactgt
ggtatcgtactggtggccatcaacccctacgaccagcttcagatctatggagaggaggtc
atcaatgcctacagtgggcagaacatgggagacatggacccacacatctttgctgttgct
gaggaggcatacaagcagatggccagagatgagaggaaccaatccatcatagtaagtggg
gagtcgggggcagggaagaccgtctctgcgaagtacgccatgcggttcttcgccactgtg
ggagggtcggccaacgacaccaacgttgaggagaaggtgctggcctccagccccatcatg
gaggctattggaaatgcgaaaaccacacgcaatgacaacagcagtcgttttgggaagtac
atccagattggttttgacaggcgttatcacataataggtgccaacatgcgcacgtatctg
ctggagaagtcgagggtggtgttccaggctgaggatgagaggaattaccacatcttctac
cagttgtgtgcctctgctagcttcccggagttcaaagacctagccttgaccagtgcggaa
gacttcatcttcacatcgcaaggagagaacatcttcattgagggggtgaatgatgccgag
gacttcaagaagacgaaggaagcctttacactactgggtgttaaggagagcaatcaaagc
agcatcttcagaatcatagcttccatcctgcatctggggaacgtggagatctgctcggag
agagacggagactcctgccacatatcaaggaacgaccctcacttgacgcacttttgccgg
ttgctgggggtggagctggagcagatggaacactggctatgtcacaggaagctggtcacc
acgtcagagacctacgtcaagaacatgtcccgcaaacaggcggctaatgcccgcgacgca
ctcgccaaacacatctacgcccacatgtttgactggatcgtggagcacgtcaacaagtcc
ctgcacacctcctccaaacaacactccttcatcggtgttctggacatctatggatttgag
acctttgagataaacagcttcgagcagttctgcatcaactacgccaatgagaaactgcag
cagcagttcaaccaacatgtgttcaagctggagcaggaggagtacatgaaggagcagatc
ccctggacgctcatcgacttctatgacaaccagccgtgtatcgacctcatcgaggccaag
ctgggcattctggacctgctggatgaggagtgcaaggtgcccaaagggacagatcagaac
tggtgccagaagctgtacgatcgcctttcaagcagtgtccatttccagaaaccacggatg
tccaacatatctttcattatcattcactttgctgataaggtcgagtaccagtgtgatggc
ttcctggagaagaacagagacaccgtctacgaggaacacatcaacattctgaaggccagt
aagtttcagctcgtggcggatctgttccaggacactaataaagacggaagcagctccacg
tcttcttccagtaagtcctccaggatcaacgtgcgctcagccaaaccgacacctaaagtc
cccaacaaggaacacaggaaaaccgtgggccaccagttccgcagctccctgcagcttctc
atggagaccctgaatgccaccaccccccactatgtgcgttgcatcaagcctaatgatgag
aaggaggcattctcgtttgactccaggagagctgtgcagcaactgagggcatgtggagtc
ctggagaccatccgcatcagtgctgctgggtacccatcaaggtggacgtacccagacttc
ttcaacagatacagagtcctcatgaagaagtcagatatgaccgtaggagacaagaaactg
gtgtgtaggaacctactagagaccctggtcaaggacccagacaagttccagtttggtaag
accaagatcttctttcgggcgggccaagtggcctacctggagaagctgagggcagacaag
ttccgctccgcctgcatcaagatccagaagacagtgcgacgctggctacagatggtccgc
tacaagaagatacgcaagtctgccatcaccttgcagagatttggccgcggttacatggcc
cgcaggtatgcggagcggctgcgtctaacccgcgctgctgttatctgtcagaagcagtat
cgtatggttagagaacggacggcctatctgagggtgagacaggctgttgtcaccatccag
gcctttaccaggggcatgttcacccgcaggatcttccaggagtttcttctgcatcacaaa
gccatgatcatccagaagcatgtccgaggctggctcaccaggaggaagttcaaggtggca
cggaacgctgccatcacaatccagtgtgcctaccgccgcatgcgagccaagcgggagctg
aaacagctgaagattgaggcgaggtccgctcaacatctgaagaagctcaacacgggcatg
gagaacaagatcgtccaactgcagaggaagatggatgaccagaccaaagatctgaagact
cagaatgagcaactggtggtggccaaagcctccctgggctcagaggtgaacaagctgcag
aaggagctggagaccatgcgcagtcgccagggagacggcagtcagctgacctctatgaag
gatgagctggagaagctgagggcggagctccaggaagcacacgcccacaggaagaagctg
gaggaggagcacggcaatgagaagatgcgatttgaacagagagtggaggagttggagagg
gagaattccctgctgaagagtgaaaaggagaagatgaaccaaaggattctgcaccactcc
aagagcacagaagaccaggagagcagtgcatcccagagtgtgggtcgggtccaggcagag
ctggatgaggagaggcagcgctatcagaacctgctcagggagttctccagactggagcag
agatatgacaacctacaggaggccaagtttcagcctggccacaggaggaacaattctaac
cagagcagcctggagtctgactccaattatccctccatttctacctcggaggtgggagac
actgacgatgccatccaactcgtagaggagatgggagtggagaaggcagcaatggacatc
ggtgtgttcatgaagctgcagaagcgtgttagggagctggaacaggagaggaagagactg
caagtcaacctggaaaagatggaggaccagtctaagcgcaagggcattgagccaaagatg
acatcagagcaagagaatgcagatctggcctacaacagtctcaagagacaggagctggaa
tctgagaacaagaagctgaagaatgacctgaacgagctgaggaaggccatcgctgaccgc
gcctccaagaacagctcctccaatgagcttcaggatggctacaacctgttgctgggtcag
ctcaaggcagccaatgaggagctggatgtgcgcaaggaggaggtccttatcctcaggagt
cagattgtcactgcagcccagcagaaagagaaggacacaaccaatcacattgaaaccaat
aacttgcctgaatggaccaacagcaagaagcccatagacaaggaggaggctctgaggtcc
tatcatggactctgtgagtctaagaagctgttggaggcccagctccagtctcaggccagg
aagcacgaggatgagctggaggcgttccacacccagattgagctgctaagggacgacata
gagaagaagcaggagatgctaaaccacaccatgtctctgtcccctgaggcccaggtggag
tacagcatccagcaggagatcacccgcctcaccaatgacaacctggacttaaaagagctt
gtggagaaactggagaagaacgagaggaagctgaagaagcagctgaggatctacatgaag
aaagtacaggagctggaagtgtccgtgactgcagcagcatctcagtccaccacggccaaa
ccagagatgacccgtcaggtgactgtccagcgcagagagaaggactttgagggcatgctg
gagtactacaaagaggacgaggccctgctggtcaaaacgctcatcaccgacatgaagccc
cacgctgtatcagcaacggtgccctgcctacctgcctacatcctcttcatgtgcatccgc
catgcggactacatcaacgatgaccagaaggtccactctctgctcacctccaccatcaac
gccattaagaaggtcctcaagaaaaacaatgatgactttgagatgacctccttctggctg
gccaacacgagccgtctgctgcactgtctcaagcagtacagtggagatgaggcgtttatg
actcagaacacggccaagcagaatgagcactgtctgaagaactttgatctggcagagtac
cgccaggtgctgagtgacctctccatccagatctaccagcagctcgtcaaggtggcagag
catgtgatgcagcccatgatcgtgtcggccatgttggagagtgagtctatccccagcctt
gcgggagtgaagcccatgggttacaggaaccgctcctccagcatggacaaggacgaggag
ggcccagggagctacaccctagaggccctgatcagacagctgggccagttccacggggtg
atgggcgagcacggcctggacccagagatagcaggccaggtgatccggcagctgttctac
agcatcaacgctgtcaccctcaacaacctgctgctcaggaaagacgtctgctcctggagc
actggcatgcagctccggtacaacatcagtcagatggaggagtggcttcgggggaagaac
ctccaccagagcggggcggtgattaacatggagcccgtcatccaggccgcccagctgctt
caggtcaagaagaagacgtcccaggacgccgaggccatctgctcactgtgtaccgctctc
accatgcaacagattgtgaaaatcctcaacctctacaccccgctcaacgagtttgaggaa
agagtcactgtgtccttcatcagaaacatccagaatcgtctgcaggagaggaacgatgtc
ccaatgctcctggtggacaccaagcacaccttccctgtcctgttcccctataccccctca
gccctcagcctggagacccttcacatccctgccaacctcagcctacacttcctcactcga
gtctga
DBGET
integrated database retrieval system
