Oncorhynchus tshawytscha (Chinook salmon): 112219511
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Entry
112219511 CDS
T05605
Symbol
eri1
Name
(RefSeq) 3'-5' exoribonuclease 1
KO
K18416
3'-5' exoribonuclease 1 [EC:3.1.-.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112219511 (eri1)
03036 Chromosome and associated proteins [BR:
otw03036
]
112219511 (eri1)
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
112219511 (eri1)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
Other RNAi proteins
112219511 (eri1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
SAP
Motif
Other DBs
NCBI-GeneID:
112219511
NCBI-ProteinID:
XP_024236589
LinkDB
All DBs
Position
LG20:complement(11009414..11012119)
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AA seq
341 aa
AA seq
DB search
MEEYKENIQDKGDNVKLSSKPEEDDKSCNKVCSNIGEPVPQVSSTRGEFSDPVYKEIALA
NGHINRMNKDELRSKLAEFKLDTRGVKDVMKKRLKNYYKKQKLSLMQSVTEGGPTDAYYD
FICVVDFEATCEQDNPLDFTHEIIEFPMVLFNTHTLDIEDSFQEYVRPEVNTQLSEFCIK
LTGITQKMVDEADTFPDVLKRVVLWLQEKELGTKYKYAILTDGSWDMSKFMNTQCRLSRL
RYPQFAKKWINIKKFYGNFYKVPRTQTKLSSMLEKLGLQYEGRPHSGLDDSRNIARIALR
MLQDGCQLRINERMHEGQLRTVPSSAPVEGAPPPHNPRSRV
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggaggaatacaaggagaatattcaagacaagggtgacaatgtgaaattgtcttctaaa
cccgaggaagatgacaagtcttgcaacaaggtgtgtagtaacattggcgaacctgtccct
caagtatcttctactcgtggcgagttcagtgatcctgtttacaaggagattgctcttgca
aatggacatatcaaccgcatgaacaaggatgagcttcggtctaaactggcagagtttaag
cttgacacaagaggtgtgaaggatgtgatgaagaagcggttgaagaactactacaagaag
cagaagctgtctttgatgcagtctgtgacagagggtggaccaactgatgcctactacgac
ttcatctgtgtggtggactttgaggcaacgtgtgaacaagacaacccccttgacttcacg
catgaaatcattgagtttccaatggtcctgttcaacacccacactttagacattgaggac
agctttcaggaatatgtcaggccagaagtcaacacacagctgtcagagttctgcataaag
ttgacagggataacacagaaaatggtggatgaagcagacacgttccccgatgttcttaag
cgggtggtgctttggcttcaggagaaagagcttggcacaaaatacaaatatgccattctt
acagatggatcttgggacatgagcaagttcatgaacacccagtgccgtttaagtcggctc
agatatccacagtttgcaaagaagtggatcaacatcaaaaaattctacggaaacttctat
aaggtccctcgtacccagaccaagctgagtagcatgctagagaagctgggacttcaatac
gagggccgccctcactctggcctggatgactcgcgcaacattgctcgcattgcgctgcgc
atgctgcaggatggctgccaactgcgcatcaacgagcgcatgcatgaaggacagctgcgg
actgtgcccagctctgcccctgtggaaggagccccacccccacataatcctcgcagcaga
gtctag
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