KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112219518
Entry
112219518         CDS       T05605                                 
Symbol
helq
Name
(RefSeq) helicase POLQ-like
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:otw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:otw03400]
    112219518 (helq)
Enzymes [BR:otw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     112219518 (helq)
DNA repair and recombination proteins [BR:otw03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    112219518 (helq)
SSDB
Motif
Pfam: POLQ_helical HTH_61 DEAD Helicase_C ResIII HHH_5 DUF7898 DNA_pol_lambd_f DUF4332 CiPC
Other DBs
NCBI-GeneID: 112219518
NCBI-ProteinID: XP_042158120
UniProt: A0A8C8JDF3
LinkDB
Position
LG20:complement(10788711..10800477)
AA seq 1031 aa
MSAEIKVKRQSSRKRSRDRRISHLTPARKRTSASGRQCPDNTGQIELSRALDKSMDAKFS
EYCSDPEDLFGDYDSIVSDSSFLAKLDRVGQNMRPHDIDHTTSSRCPVILLAGNPDFTSL
KSSTDNCPKQSCDDSMTESFLEGFTDDAFLDMPSSQLAFLQDPQTADRNCCTDEDKTSMP
MRHPEKSVSTEERNERHIAPKARKSVSDHLKRAMMANAATPSSVSRTAVQKEAVVTEEIS
VAMQAMESVSMATTDLGPFFGLPTKVKELICNLKGIKDLYEWQKTCLNLDSVQQRRNLIY
SLPTSGGKTLVAEILILKEILCRKKDALFILPYVSLVQEKVRGLASFGLELDFMVEEYAG
SKGRFPPVKGRGKRSLYIATIEKAHGLVNSLIETNRLDNVGLVVVDELHMLGDGSRGAII
EMTLAKVLYISKSTQIIGMSATLGNLQDIQKFLKAESYTNDFRPVELKEYVKLKDSIYEV
DPKEEECFRFSRVLNFKYSSAMQKIDQDHIVALVTEVIPSQSCLVFCPTKKNCENVAGMI
CKYLKEDFIQHKQAEKAVLLGELRSSGNGSLCPVLKKTVPYGLAYHHSGLTSEERKLVEE
AYSAGVLCLLTCTSTLAAGINLPARRVILRSPYVAADFLKRSQYKQMVGRAGRAGIDTHG
ESILILQDKDKVLVKKLVSAPMEICKSNLMHSDGKGVLSLILSVIGLNITNSLEQIRDFM
SGTLLSVQEKQVCLERSLWEVTQECVELLKEKGLVTVSTEPQDGSLQVTKLGRATYKGSV
DLTYCDLLYRDLSKGLESLMLNSFLHLIYLVTPYDMVSQCKPDWMVYFRQFTMLSAAEQK
MCAAVGVSESFVARKAAGQNVKKNVDQVVVSRLYLALVLQSLLKETDLWSVADRFQLSRG
FIQTLLSSSSVFCSCVLHFTEELEEFWPFKALLTELTRRLTYCVQAELIPLMEVAGVMER
RAKQLYNAGYKTLAHLANADPNVLAKTVENLFKKQANQIVASAKMLLNEKADALQEEMDD
LLMMPLDLLSL
NT seq 3096 nt   +upstreamnt  +downstreamnt
atgagtgccgaaatcaaagtaaaacgacagtcctcgaggaagcggtccagggatagacga
ataagtcatctcacgcccgcaaggaaaaggaccagtgcttctggacgacaatgtcctgac
aacacgggacagatagagctttccagagctttggacaaatccatggatgcaaagttcagt
gagtactgcagtgaccctgaggacttatttggggactatgacagcattgtaagcgacagc
tctttcctggcaaagctcgatagagtggggcagaacatgagaccgcatgacattgaccat
acaaccagcagcagatgccctgtgattttgcttgctgggaaccctgacttcacttcactg
aagtcttcaacagacaactgtccgaaacaatcatgtgatgactcaatgacagaatcattc
ctggagggcttcacagatgatgctttcctagacatgccaagctcacaactcgcttttcta
caagatccccaaacagcagacaggaactgctgtacagatgaggacaaaacctccatgcct
atgagacatcctgagaagtctgtcagcactgaagaaagaaatgagaggcatatcgccccc
aaggcaaggaagagcgtgtccgatcatctgaagagagctatgatggctaatgcagcaact
ccttctagtgtctcccggactgcagtgcagaaggaggccgtagttacagaggagatcagt
gttgccatgcaggctatggaatctgtctccatggcgacaacagaccttgggcctttcttt
ggtcttcccaccaaagtgaaggagctgatatgcaatctcaaaggaatcaaagatttatat
gaatggcagaaaacttgtctaaacctggactcagttcagcagaggagaaacctcatctac
tctcttcccaccagtggtgggaagactttggtggctgagattcttatcctcaaagagatt
ctgtgcagaaagaaggatgcccttttcatcctgccttacgtatctctagtgcaggagaag
gttcgagggttggccagttttggcctggagctagacttcatggtggaggagtatgctggc
agtaagggcaggttccctccagtgaagggaaggggcaagaggtccctgtacattgccact
atagagaaggcacacggcctggtaaactctctcatagagaccaacagactggacaatgtg
gggctggtggttgtggatgagctccacatgttgggtgatggtagcagaggagctatcatt
gagatgactctagccaaagtgctctatatcagtaagtcaactcagatcattggaatgagt
gctactctgggcaatctccaagatatacagaagtttctgaaggcagagagctacactaat
gacttcagaccggttgagctgaaggagtatgtgaaactgaaggacagcatatacgaggtg
gaccccaaggaggaggagtgcttcagattctctcgggtcctgaactttaagtactccagt
gccatgcagaagatcgatcaggatcatattgttgccttggtgactgaggtcattccaagc
cagtcttgccttgttttctgtcccaccaagaagaactgtgagaacgtggctgggatgata
tgcaagtacctgaaagaggactttatccaacacaagcaggcagagaaggctgtgttgctg
ggggagctgaggagcagtgggaatggcagcctgtgtccggtgctcaagaagacggtgccg
tacggcctggcttaccaccacagtgggttgaccagtgaagagaggaagctggtggaggag
gcctactctgcaggggttctctgtctcctcacctgcacttctacgctggctgcagggatc
aacctacctgctcggagagtgattctgcgttctccgtacgtggcggcagacttcctgaag
aggagccagtacaagcaaatggtggggagggctggacgggccgggatagacactcatggc
gagagcatcctcattctacaggacaaagacaaagtcttggtcaagaagcttgtatccgcg
ccaatggaaatctgcaaaagcaatctaatgcatagcgacggaaagggtgtcctgagtctc
atcctatccgtcattggattaaatatcacgaacagcttagagcagatcagggacttcatg
agtggcacgttgctgtctgtccaggagaaacaggtgtgcttggagaggagcctgtgggag
gtgacacaggagtgtgttgagctgcttaaagagaaaggcctcgtcaccgtttccacagag
ccacaagatgggtccctgcaagtcaccaagctaggaagagctacttacaaaggctcagtg
gatctgacctactgtgacctcctgtatagagacctgtctaaaggcctggagagcctgatg
ctgaacagtttcctccacctcatctacctggtcacaccctatgacatggtctcccagtgt
aagcctgactggatggtctacttcagacagttcacaatgttatcagctgcggagcaaaag
atgtgtgcagcagttggtgtgtctgaaagttttgttgctagaaaggctgctggacagaat
gtcaagaagaatgttgaccaggtggtggtgagtcggctgtacctggccctggtactgcag
tccctgctgaaggagactgacctgtggagcgtggctgacaggttccagctcagccggggc
ttcatccagacactactcagctcttcctcagtattctgctcctgcgtgctgcacttcacc
gaggagctggaagagttctggcccttcaaagctctcctgactgagcttacccgcaggctg
acctactgtgtccaggccgagctcatccctctcatggaggtagcaggagtcatggagaga
agagccaagcagctgtacaatgctggatataagacactggctcatctggccaacgctgac
ccaaatgttctcgccaagactgtggagaacctcttcaagaagcaagctaatcagattgtt
gcttcggcaaaaatgctgctgaatgagaaagctgatgcccttcaggaggagatggatgac
ttattgatgatgcctcttgatctcctctctttgtaa

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