Oncorhynchus tshawytscha (Chinook salmon): 112219593
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Entry
112219593 CDS
T05605
Name
(RefSeq) rabphilin-3A-like isoform X1
KO
K19938
rabphilin-3A
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112219593
Membrane trafficking [BR:
otw04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112219593
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Gene cluster
GFIT
Motif
Pfam:
C2
FYVE_2
Ribosomal_L37ae
SH3_14
Motif
Other DBs
NCBI-GeneID:
112219593
NCBI-ProteinID:
XP_024236726
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Position
LG20:9390329..9430387
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AA seq
624 aa
AA seq
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MHRHSGGHGGGGPQEVELTDEEKEIINSVLARAETMEAMEQERIGRFATRLDSMKKTACG
DGHSRCLLCGETFGQQGVNSVLCSHCKKHMCSKCGIQNNSRSSCPVWVCRICSEHKEMLK
RSGAWFFKGQPQKVLPAPLPISRPRGTGRESPRTLNPTHHQPSTQPYARTQTQPIYQPDA
GAQDCTEQQEQQGNCCSNTENQEPTDEPPYSSSEQQDPEGYRSAQTLGGVAVQEELVKNQ
SKLGSRPPTARGRENTPAPADSVTLQAPAPEESRHPHQREDRAPTPVGEEKPTPAPKPTL
AARPAPAPVEDDDNEYDSDESTTLGLLEFTLHYEQESNALHCNIVKAKGLKPMDSNGLAD
PYVKLHLLPGASKSNKLRTKTLKGTLNPVWNETLVYHGITDDDMQRKTLRLSVSDMDKFG
HNEFIGETRVALKKLKANQKKNYSVCLERVVQVKKAGTGGSARGMALYEEEVKEDAEERG
RILVSLTYSTQQGRLIVGVVRCAHLAAMDSNGYSDPFVKIFLKPDMGKKAKNKTQIKKKT
LNPEFNEEFSYEIKHGELAKKSLDISVWDYDMGTSNDFIGGCQLGITAKGECLKHWYECL
KNKDKKIERWHVLLDDNTVKDTDD
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgcaccggcacagtggaggccatggaggaggaggtcctcaggaagtggagctaacagat
gaagagaaggagatcatcaacagtgttctggctcgggctgagaccatggaggccatggag
caggagaggatcgggcgttttgccactaggttggacagtatgaagaaaacagcatgtgga
gatggtcactctcgctgtctgctgtgtggagagacgtttggccagcagggagtcaactcc
gtactctgttcccactgcaagaagcatatgtgcagtaagtgtgggattcagaacaacagc
cggtcgtcatgtcctgtgtgggtctgtaggatctgcagcgagcacaaagagatgttgaag
cgttctggagcgtggttctttaagggccaaccccagaaggtcctccctgctcccctgccc
atctccaggcccagagggacaggtagagagagcccccgtaccctgaaccccacccatcac
cagcccagtacccagccctatgcccgtacccagacccagcccatctaccagccagacgct
ggtgcccaggactgcacagagcagcaggagcagcagggtaactgctgctccaacacagag
aaccaagagcccaccgatgagcccccgtactccagctcagagcaacaggacccagagggg
tataggtctgctcagacactagggggcgttgctgtgcaggaagagttggtgaagaaccag
tctaagttaggctccagacctcccacagccagggggagagagaacacgccagctccagct
gactcagtcacactacaggcccctgcgcccgaggagagcagacaccctcaccagagggag
gatagagccccaactccagtcggggaggagaaacccactcctgcccccaaacccaccctg
gcagcacgcccagcccccgctcctgtcgaggacgatgacaacgaatatgactctgatgaa
tccaccaccctggggttactggagttcactctgcattatgaacaggagagcaacgcactg
cactgcaatatagtcaaagccaagggcctaaagccgatggactctaatggcctagcagac
ccttacgtcaagctgcacctcttacctggtgccagtaagtctaacaagctgcgtactaag
acactgaagggcactctgaacccagtgtggaatgagactctggtgtaccatggtatcact
gacgacgacatgcagcgcaaaacactacggctgtcagtgagtgatatggacaagtttggg
cacaatgagttcatcggagagacacgtgttgctctgaagaaactcaaagccaaccagaag
aagaactacagtgtgtgtctggagagggtggtccaggtgaagaaggcaggaacaggaggc
tcagcccggggcatggcactctacgaggaggaggtaaaggaggatgcagaggagaggggt
cgtatcctggtctctctaacctacagtacccagcagggtcgtctgatagtgggagtggtg
cgatgtgctcacctggcagctatggactctaatggatactcagaccccttcgtcaagatc
ttcctgaaaccagacatggggaagaaagccaagaacaagactcagataaaaaagaagacg
ctgaacccagagttcaacgaggagttcagctatgagatcaaacatggtgagctggccaag
aagagcctggacatctcagtctgggactatgacatgggaacatccaatgatttcattgga
gggtgccagctgggcatcacagccaagggggaatgtctgaagcactggtacgaatgtctg
aagaacaaagacaagaagatcgagcgctggcatgtcctcctagatgacaacaccgttaaa
gacacggacgactaa
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