Oncorhynchus tshawytscha (Chinook salmon): 112219602
Help
Entry
112219602 CDS
T05605
Name
(RefSeq) E3 ubiquitin-protein ligase UHRF2-like isoform X1
KO
K15713
E3 ubiquitin-protein ligase UHRF2 [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112219602
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112219602
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112219602
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TTD
SAD_SRA
ubiquitin
PHD
zf-C3HC4_2
PHD_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
Rad60-SLD
Motif
Other DBs
NCBI-GeneID:
112219602
NCBI-ProteinID:
XP_024236739
LinkDB
All DBs
Position
LG20:5308580..5348131
Genome browser
AA seq
934 aa
AA seq
DB search
MWIQIRTIDGKETRTIEDLSRLTKIEYLRLKIKDIFNVNPQQQRLFYRGKQMEDGHTLYD
YNVGLNDIVQLLIRSQAGDAPDSPLVPHIAPPVTPKDCDTMSSSTALPPTSSNTTAGAAT
TPSPSKPTIMAPKPIPTLTTVNNNTTTSNSSTSNTSDPNNNRAKSSTPPALLEKLDNQPS
TSTRPFLIDAGIGVFKINELVDCRDISIGAWFEACIDKVARTPKGQNSNSKAPTAGKVGR
PSKRTNGKLEAEPGQGLSHPSSSTDNSNGNNYSMLNSDSGPGAASSTSQTDSTATDKEKE
DVTYHIKYDDYPENGVVEMCGGNVRPRARTLLRWDQLSVGLVVMVNYNIEIPEERGFWFD
AEITVLNEISRTNKEVRVKILLGGPGDVIPDCKLLFLDEIYQIEKTGAPSLSAADGQFKR
KSGPECKHCKADPDSECRFCSCCVCGGKQDAHMQLLCDECNMAFHIYCLNPPLSTIPDDE
DWYCPTCKNDTSEVVKAGEKLKASKKKAKMPSAHTESQRDWGKGMACVGRTKECTIVPSN
HYGPVPGVPVGTTWKFRVQVSEAGVHRPHVGGIHGRSNDGSYSLVLAGGFEDEVDRGDEF
TYTGSGGRDLSGNKRIGEHSFDQTLTHYNRALALNCDAPINDKDGAESRNWRAGKPVRVV
RSSKGRRISKYAPEEGNRYDGIYKVVKYWPEIGKCGFLVWRYLLRRDDLEPAPWTPEGLE
RIQKLGLAVQYPPGYVEAMANKTKKEANARPGCTRSKKQPGRGRPRLHPLEKKVKEDEKK
PMEGTEQPQSNGSQKTPKDKETEVCKESAEPRAKRLKMEEAFQLTEQQQSLIKEDQPNKK
NWDEAMGHLKEGPNFLRKVEQTFMCVCCQELAYQPVTTVCAHNVCKTCLLRSFRAEVYTC
PACRHDLGKDYIMVLNKTLQLLLDQFFPGYSKGR
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgtggattcagattcggaccatagacggaaaggagacacgaaccattgaggatctttcc
aggctgaccaaaattgagtatctgaggctgaaaatcaaggatatcttcaatgtaaacccc
caacaacaacggttattctatcggggcaaacagatggaagatggccacacgctgtatgac
tacaacgtgggactgaacgacatcgtccagctgctaatccgttctcaggcaggggacgct
cccgacagccccctcgtcccgcacattgcaccccctgtcaccccgaaggactgtgacacc
atgtccagtagtacagctctgcctcccacctcctccaacaccacggctggtgcagcaacc
acaccctccccatccaagcctaccataatggcccccaaacccatccctaccctcaccaca
gtcaacaacaacacaaccaccagtaacagcagtaccagtaacaccagtgatcccaataac
aacagggccaagtcttctactccaccagcactgctggagaagctcgacaaccagccatca
acctctacacgtcccttcctcatagacgccggcattggggtgttcaagataaatgagttg
gtggactgcagagacataagcatcggtgcctggtttgaagcctgcattgacaaggtggca
cgaaccccaaagggtcagaacagcaacagcaaagctcctacagcggggaaggttggcagg
cctagcaaaaggactaatggcaagctggaggccgagccgggccaaggcctaagccacccc
tcctcctccacggacaatagtaatggaaataattattcgatgttaaactcggacagtggg
ccaggggctgcgtcctccacctctcaaacagactctactgccacggacaaagagaaggag
gatgtcacgtaccatatcaaatatgacgattaccctgagaacggcgtggtggagatgtgc
ggtggtaacgtgaggccgcgggctcggactctgctccggtgggaccagctcagtgtaggc
cttgttgtcatggtgaactacaacattgagatcccagaggagagggggttctggttcgac
gctgagattactgtgctcaatgagatctccagaaccaacaaggaggtccgcgtcaagatc
ctactgggagggccaggggacgtcatcccagactgtaagctgttgtttctggatgagatc
tatcagattgagaagactggagcaccctcactgtctgctgcagatggccagttcaaacgg
aagagcgggcccgagtgtaagcactgcaaggcggaccccgactctgagtgcaggttctgc
tcgtgctgtgtgtgcggagggaagcaggacgcccacatgcagctgctgtgtgacgaatgt
aacatggccttccacatctactgcctcaacccaccgctctccactataccagatgacgag
gactggtactgtcccacctgtaagaatgacactagcgaggttgtgaaggctggtgagaag
ctgaaggccagtaagaagaaagcaaagatgccatcagcccatacagagagtcagagggac
tggggcaagggtatggcctgtgtggggcgcactaaggagtgtaccatcgtcccctccaat
cactacgggcccgtacctggtgttcccgtgggaacaacatggaagttccgtgttcaggtg
agtgaagctggagtgcacaggccccacgtgggaggtatccacggccgcagtaacgatggc
tcctattcgctggtgctggccggaggcttcgaggatgaagtggacaggggagatgagttc
acctacacgggcagcgggggtcgcgacctttcagggaacaaacgcatcggggagcattcc
tttgaccagaccctaacccactataacagggccctggcgctgaactgtgacgcccccatc
aacgacaaggacggggcggagtccaggaactggcgtgcggggaagccagtgcgggtggtg
cggagctccaagggacgacgcatcagcaagtacgccccggaggagggcaatcgctacgat
ggcatctacaaggtggtgaagtactggccggagatagggaagtgtggtttcctggtgtgg
cggtacctgttacggagggatgacctggagcctgctccctggacacctgagggcctggaa
cgcatccagaaactgggcctagctgtgcagtatcctccaggctacgtggaggccatggcc
aacaaaaccaagaaggaggctaacgctcgaccagggtgcactaggagcaagaagcaacct
ggacggggacggccacggctacaccccctggagaagaaggtgaaggaggatgagaagaag
cccatggagggtacagaacagccacagagcaacggcagtcagaagacacccaaggacaag
gagacggaggtgtgtaaggagtcggcggagccccgagccaagcgtctgaagatggaggag
gcgttccagctgacagagcagcagcagagcctcatcaaggaggaccaacccaacaagaag
aactgggacgaggccatgggacacctcaaggaggggccgaacttcctgaggaaggtggaa
cagaccttcatgtgtgtctgctgccaagagctggcctaccaaccggtcaccactgtctgc
gctcacaacgtctgcaagacctgtttgttgcggtctttccgagcggaagtgtacacctgc
cctgcatgtcgccacgacctgggtaaagattacatcatggtcctcaacaagactctacag
ctgctgttggaccagttctttcctggctacagcaagggccgatga
DBGET
integrated database retrieval system
