Oncorhynchus tshawytscha (Chinook salmon): 112219627
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Entry
112219627 CDS
T05605
Name
(RefSeq) huntingtin-interacting protein 1-related protein isoform X1
KO
K20040
huntingtin-interacting protein 1-related protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112219627
Membrane trafficking [BR:
otw04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
112219627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANTH
I_LWEQ
HIP1_clath_bdg
Motif
Other DBs
NCBI-GeneID:
112219627
NCBI-ProteinID:
XP_042158069
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All DBs
Position
LG20:complement(8813367..8829988)
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AA seq
1324 aa
AA seq
DB search
MSSSKPKNKSENKTEKQLAAEKEQFGKLQLHSISKSITSSETPLKEKYARNIIMGTHKEG
GATTFWSFIINLPLSSNAIISWKFCYMLHKVLRDGHHNAVRDSHRYSRNVKDMGVLWGNL
HDRYGHIVSLSAKFLSLKMEFHVKHKVIPGNLEATDETVEREAGTDVNKIFDMTHELLDY
LDAALKMSETVWRQLDANAGKSTTPAGQCRLGPLIPVILDCSWLYHFSVKLLFKLHSCVS
ADSLLGHRERFRDLFNSLTKLFDRARETEFFKKVIQIPDLPDSPPNFLRASALAEYVRPV
VVMPNEEPYEEVDAAPQPVYSQAPQQPYNMLSQLGAPDAGFDQRRSPSPALTEAEALRKE
LEVIKPELQLLKTEAQRCVTQLKSQVNRLEAELEDQRTHKQMALVDNEHLRMEVGALRQA
TAALPGVQAGYQEADGRAQAAELRFSQLKERHAELVTSHADLLKKNAETVRFLSSTQQNQ
EELATAKQQLASEVDHLRQENRLKLEQQKQEMDRLKRELLDQRAALGEVHSVLDNKEMAG
SQMTGALQGLQREREELLRCLREKEGEVSSLQQQAQLHHGSIEQDRDRSAREMASLRQQL
QQQLAINAEQRVEIDRLKRELEQSRAEVSRANNALQNKEMTGSQMNSALMGLQTEREGLL
RSVREKDAELSSLRQQAQLQCSSLEQDNDRTSREMASLRQQLQQRASREGELTRKLQEEQ
FCLLQCVVVEAEGIILDAVSKLDDPIHVRCTCSPDYLVNRAEITLGSLDKMQQSHMVYLG
NMDDASGLLRAVTQFSHLASDTIVNGGATAHSAPTDQADRLTDSCREASTHCLQFLHELK
SRATLQRADPTTIRYVMRRILTMGQDLCLQGQDVLKEELGEMVDKEMTATSTAIEEAVLR
MDEILNQARRDTSGVKLEVNQSILGSCSDLMKAIHMLVTAATDLQKDIVESGRGAASVKE
FYAKNSCWTEGLISASKSVGWGATQMLDSADKVVTSGGKYEELIVCSHEIAASTAQLVAA
SKVKADRNSKKLSTLQQASRHVNDMAAIVVTSTNHGQRQITEREPMDFSGISLIKVKTQE
IESQVKVLELENQLEQERVRLGELRKKHYQLSGTGTTHGGEVEVEGGDGDDGGDSFPPPP
PPTLLPASTLLPQPYLNTQPFSQTQPDSQLSAQSYSPPKSYSHTQPYSQTKPYSEPESYS
QPATQSYSPPQSYSSSQTQSYLPPQSYSQTQSYSPPQTYSQSQPYVNTNPFSQPPPLSQP
LSPPLSQPESLPLPNNSVELAKPTHTSKKPSIFQKTGTLFSKFRRGEAGTEESRIRNVRI
PNPE
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atgagctcgagtaaaccgaaaaacaaaagcgagaataaaacagagaagcaattggctgcg
gagaaagaacagtttggaaaactacagctccacagcatcagtaaaagcatcacctccagt
gagacaccgctgaaggagaaatatgcacgcaacatcatcatggggacccataaggagggc
ggagccacaacgttctggtcgttcatcatcaacctgccgctctcctccaatgccatcatc
agctggaagttctgctacatgctgcacaaagtcctccgggacgggcaccataacgctgtg
agagactctcatagatacagcaggaacgtcaaagacatgggcgtactctgggggaacttg
catgataggtacggccatattgtgtccctttcggccaagttcctgtccctcaaaatggag
ttccatgtgaagcacaaggttattccaggtaacctggaggccacagacgagacggtggag
agagaggcaggaactgacgtcaacaaaatatttgatatgactcatgagctgttagattac
ctggacgctgctctgaaaatgtcagagacagtttggcggcagctggatgccaacgctggc
aagtccaccaccccggccggacagtgtcgcctgggacctctaattcctgttatactggac
tgcagctggctctaccacttctctgtcaaactactgttcaaactgcacagctgtgtttca
gctgactctcttctcggacaccgggagagattccgtgatctgttcaacagcctcactaag
ttatttgatcgagccagagagacggagttcttcaaaaaggttattcagatccctgacctg
ccagattctcctccgaacttcctgcgtgcctctgcgctggcggagtacgtgcggccggtg
gtggtgatgcccaatgaggagccttatgaagaagtcgatgcggcgccacagccagtctac
agccaagcaccacagcaaccgtacaacatgttaagccagctgggagctcctgatgctgga
tttgatcaaagaagatctccgtctccagctctgacggaggcagaggctctgaggaaggag
ctggaggtcatcaaaccagagctgcagctcctcaaaacggaggctcagaggtgtgtgacc
cagctgaagtctcaggtgaataggctggaagcagagctggaggaccagaggacccataag
cagatggctctggtggacaatgaacacctgcgcatggaggtaggggccttacgacaggcc
accgccgccctaccaggggtacaggctggataccaggaggctgatggtcgagcccaggca
gctgagctgcgtttttctcagctcaaagagcgacacgctgaactggtcaccagccacgct
gatctactgaagaagaatgcagagacagtccggttcttgtccagcacccagcagaaccag
gaggaattggccacggccaaacagcagctggccagcgaggtggaccaccttcgacaggag
aatagactcaagctggagcagcagaagcaggagatggatcggctgaaaagagagctgttg
gaccagagagcagcgttgggtgaagtccacagtgtcctggacaacaaagagatggctggt
tcccaaatgactggtgctctgcagggtctccagcgagagagggaggaactgctgcgctgt
ttgagggagaaagagggtgaagtgtcctccctacagcagcaggctcagctccatcacggc
tccatagagcaggacagggacagatcagccagagagatggccagcctgaggcaacagcta
cagcaacagctggctataaacgcggagcagagagtggagattgacagactgaagcgagag
ctggagcagagtcgagcagaggtgtcacgtgctaacaatgccctgcagaacaaggagatg
actggttctcagatgaacagtgccctgatgggtctccagactgagagagaggggctgctg
cgctctgtgagggagaaagatgctgagctgtcctctttaaggcagcaggcgcagctccaa
tgcagctctctggagcaggacaatgacaggacatccagagagatggccagtctgaggcaa
caactacagcaacgggcatctcgtgagggtgagctgaccaggaagctgcaagaggaacag
ttctgtctgctccagtgtgtcgtggtggaggctgaaggcatcatactggacgctgtgtcc
aaattggacgaccccatacacgtacgctgcacctgctctccagattacctggtgaaccga
gctgagatcaccctgggttctttggacaagatgcagcagagtcacatggtctaccttgga
aatatggacgatgccagtggtcttctgagggctgtgacgcagttctcccatctagcttct
gacaccatcgtcaacggaggagctacagcacacagtgctcctactgaccaggccgaccgt
ctgactgacagttgtagagaagcttccactcactgtctgcagttcctacacgagctgaag
tccagagccacgttacagagagccgaccctactacgatacgctatgtaatgcgacgtata
ctcactatgggacaggatctgtgtcttcaagggcaggatgttctaaaagaggagctgggg
gaaatggttgataaagagatgactgctacctctactgcaatagaggaggctgtactccgc
atggacgagatcctgaaccaggccaggagagacacatctggggtcaaactggaggtcaac
cagagcatccttggctcctgttcagacctaatgaaggccatccacatgctggtgaccgcc
gccactgacctgcagaaagatattgtggaaagcggcagaggggcagcatcagtgaaggag
ttctatgctaagaactcctgttggactgaaggcctcatctctgcctccaagtcagtgggc
tggggcgccactcagatgctagactcggctgacaaggtggtaactagcgggggtaaatac
gaggagctcatcgtctgttctcatgagatcgctgctagtaccgcccagctggtcgctgcc
tccaaggtgaaggcggaccgcaacagcaagaagctgtcgacgctgcagcaggcctcgaga
cacgtcaacgacatggctgccatagtggtgacctccaccaatcacggacagaggcagatc
actgagagagaacccatggacttctcaggcatctccctgatcaaagtgaagactcaagag
attgagtctcaggtgaaggtgttggagctagagaatcagctggaacaggagagagttcgt
ctgggagagctgaggaagaaacactaccagctgtctgggactggtacaacccacgggggg
gaggtggaggtggaggggggagacggggacgacgggggagacagcttcccaccccctccc
cctccaaccctcttaccagcctccaccctgctgccccagccctacctaaacacacagccc
ttctcacagacacaacccgactcacaactatcagctcagtcctactcaccacccaagtcc
tactcacacactcaaccctattcacaaacaaagccttactctgaacctgaatcctactca
cagcctgcaacgcaatcctactcaccaccccaatcctactcatcatcccaaacccaatct
tacttaccacctcaatcgtattctcaaacccaatcctactcacctccccaaacatactct
caaagccagccgtatgtaaacaccaatcccttctcccaacccccgcctctgtcccagcct
ctgtctccacctctgtcccagcccgagtcccttccccttccaaataactcagtagaactc
gccaagccaacccacacttcaaagaaaccttccatcttccagaaaacaggaaccctgttt
agtaagttccgaagaggtgaggctggaacagaggaatccagaatccggaatgttagaatc
ccaaatccagaatga
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