Oncorhynchus tshawytscha (Chinook salmon): 112219630
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Entry
112219630 CDS
T05605
Symbol
sbno1
Name
(RefSeq) protein strawberry notch homolog 1 isoform X1
KO
K26273
protein strawberry notch
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112219630 (sbno1)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
112219630 (sbno1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
OspG_kinase
Motif
Other DBs
NCBI-GeneID:
112219630
NCBI-ProteinID:
XP_024236824
LinkDB
All DBs
Position
LG20:complement(8730952..8760872)
Genome browser
AA seq
1396 aa
AA seq
DB search
MMDPGQDLLLAALSESGICPNDLFDFDPQDAALPSPTPQSISISALGVGSGVEAMAPPTP
AVSIRHKPQPSTTTFVLNQLNQLPSLGTIVVTKPSTGGTARHTITVTKVVHSAPSALRGS
SSTLTYSTALPSPVSTVVPSNREQIQLKDLLRTGSTMKSSSLVELMRLKPPPDIAQPVAT
ATATGTTELNNGIKKEVSSKDVARIWVNDDMKVRSFSPTLKLPGMEEEAEEEEDEELGHA
ETYAEYMPMKLRIGLRHPDPVVETSSLSSVKPPNVWYRMSIPEETVDRGWLSALQLEAIT
YAAQQHETFLPNGDRASYLIGDGAGVGKGRTIAGIIYENYLLGRKRSLWFSVSNDLKYDA
ERDLKDIGAKNIQVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQSGGKYKTRFK
QLLHWCGEDFDGVIVYDECHKAKNVCPIGSSKPTKTGLAVLELQNKLPKARVVYASATGA
SEPRNMAYMNRLGIWGEGTPFREFSNFIQAVERRGVGAMEIVAMDMKLRGMYIARQLSFT
GVTFKIEEVPLTTHYIKMYNKSVRLWVAAREKFQAAANLMEAEQRMKKSMWGQFWSAHQR
FFKYLCIASKVRRVVQLAREEVKNGKCVVIGLQSTGEARTLEALEEGGGELNDFVSTAKG
VLQSLIEKHFPAPDRQKLFSLLGIDLSVKKTPSPSEAAAEQKGKKRKAGAEIKKPEKRKR
KSGGLSGSSSDDSESEESDKDDAESDDSFKSVSSGEDDDDFNPFKDDSSENEEDDPWLSG
KRKEVKKGKEKMNKKKKKKKKSIDPDSIHSALLASGLGSIRPAFTTPIVKTSSAPAIAKV
EADDSCMTSQDAVEDAQQMKRDLLDQLEKLAQDLPPNTLDELIDELGGPDNVAEMTGRKG
RVVSNDDGSISYESRSELDVPVEILNLTEKQRFMDGEKNIAIISEAASSGISLQADRRVK
NQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFASIVAKRLES
LGALTHGDRRATETRDLSRFNFDNKYGRNALEIVMKSIVNLDSPLVNPPSDFEGDFYKEI
RHGLIGVGLINVEDRSGILSLDKDYNNIGKFLNRILGMAVQEQNALFQYFSDTLAAVIQN
AKKNGRYDMGILDLGSGDEKVKKIEAKKFLTPGYSTSGHVELYTVSVERGMSWEDATHAW
AEQSGPDDGFYVQIRNNKKTAILVQEVNSKKRLFLVYRPNTGKQLKLEAYADIKKKCKKV
LSDDAKQHWIDQYKSSAEICAHAYWRGNCKKASVGLQCEVGLRCRTYYVLCGSVLSVWTK
VEGVLASVSGTNVKMQIVRLRTEDGQRIVGLIIPANCVSPLTNILSSSDQSQQLAVQQQQ
KWQQLHPQSLSHVHNT
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atgatggatcctggacaggatttgctcttggcagccctgagcgagagcggaatctgccct
aacgacctgttcgactttgaccctcaggatgctgctcttccctctcccaccccacagtcc
atctccatcagtgccctgggtgttggctcaggggtggaggcaatggctccacccacacct
gcagtctcaatcaggcacaagcctcagccctcaactaccacatttgtcttaaatcaactg
aatcagttgccatcactgggaacaattgttgtgaccaagccctcaactggaggcacggcc
agacacaccatcacagtcactaaggtggtccattcagctccctcagccctgcggggatcc
tcttccacacttacctactccactgctctcccctccccagtctccacagtggttccttcc
aacagagagcagatccagctgaaggacctgttgaggaccggcagcaccatgaagagcagt
agtctggtggaactcatgaggctcaagccaccgccagacatcgcccagccggtcgccacg
gcaacagccacaggcaccacggaactgaacaacgggataaagaaggaggtgtcaagtaaa
gatgtcgctcggatctgggtgaacgacgacatgaaagtgcggagcttctcacctacacta
aaactcccaggaatggaggaggaggctgaggaagaggaggatgaagagttgggtcatgct
gagacatacgctgagtacatgcctatgaaattgaggatcgggctgcgtcacccagaccca
gtggtggagaccagctccctgtccagtgtgaagcctccaaacgtttggtacagaatgtcc
ataccagaggagactgtcgaccgcggctggctgtctgctctgcagctggaggccatcaca
tacgctgcccagcaacatgagacattcctccctaatggcgaccgagcgtcctatctgata
ggagacggggccggagtaggcaagggccggaccatcgctgggatcatctacgagaactac
ctcctcggtagaaagaggtcactctggttcagtgtttctaatgacctgaagtatgatgcg
gagagggatctgaaagacataggagccaagaacattcaggtccattcactaaacaagttt
aagtatggtaagatctcgtccaaacacaatggcagtgtgaagaagggggtgatcttcgct
acgtactcttctctgatcggagagagccagtctggagggaagtacaagacccgcttcaaa
cagctgctccactggtgtggagaggacttcgacggagttattgtatatgacgagtgtcac
aaagccaaaaatgtctgtccgatcgggtcatccaaacccaccaagactggactggcagtc
ctggagctgcagaacaaactgcccaaggcacgggtggtgtacgctagtgccactggtgcg
tctgagccccgtaacatggcctacatgaaccggctgggaatctggggagaggggacacct
ttcagggagttcagcaactttatccaggctgtggagcgcagaggtgttggtgccatggag
atagttgccatggatatgaagctgagggggatgtacattgccaggcagctgagtttcaca
ggtgtcacgttcaagattgaggaggttcccttgacaacccactacatcaagatgtacaac
aagtctgtacgcctgtgggtggctgcgcgggagaagttccaggcggctgctaacctgatg
gaggcagagcagcggatgaagaagtccatgtggggtcagttctggtcggcccaccagagg
ttcttcaagtacctctgcattgcctccaaggtccgcagggtggtgcagcttgccagggag
gaggtcaaaaatggaaagtgtgtcgtgattggtcttcagtcgacaggagaggccagaaca
ctggaggccctggaggaagggggaggagagctgaacgactttgtttccaccgcaaaaggt
gttctgcagtccttgatagagaagcacttccctgctccagacagacaaaagctgttcagt
ctgctgggcatcgacctgtcggtcaagaagacgccatcgcccagcgaggccgccgcagag
caaaagggcaagaagaggaaagcgggtgctgagataaagaaaccagagaagcggaagaga
aagtctggtggtctgtcagggagcagctctgacgacagcgaatcggaggagtctgataag
gatgatgcggagagtgacgacagcttcaagtcggtcagctcaggagaagatgatgatgac
ttcaaccccttcaaggatgattccagcgagaatgaggaggatgacccctggctgtctgga
aagaggaaagaggtgaagaaaggcaaggagaagatgaataaaaagaagaaaaagaagaag
aagagcattgacccagactctatccacagtgccttgttagcctctggtctgggctccatc
aggcctgcttttaccacccccatagtcaagacctccagcgcacctgccatagccaaggta
gaggcagatgacagctgtatgaccagtcaggatgctgtggaagatgctcagcagatgaag
agagatctgttggaccagctggagaagctggctcaggatctaccccccaacactctggat
gaactcatagacgagctgggaggaccggacaatgtggctgagatgacaggccgtaaagga
cgggtggtcagtaacgacgacggcagcatctcttacgagtcccgctctgaattggatgtt
cctgtggagatcctcaacctcacagagaaacagaggttcatggacggagagaaaaacata
gccatcatctcggaggcggctagctccggtatctccctgcaggctgaccggcgggtgaag
aaccagaggaggagggtccacatgaccctggagctgccctggagtgcagacagagccata
cagcagtttgggaggacccacaggtctaaccaggtgacagctccagagtatgtgttcctc
atctctgagctggctggggaacagaggtttgcctccattgtggccaagagactggagagc
ctgggtgccctcacgcatggagacagaagagcaacagagacaagggatctcagcaggttc
aactttgacaacaaatatggcagaaatgcactggagatcgtgatgaagtctattgtcaac
ctggactctccgttagtgaatcctccttcggacttcgaaggggatttctacaaagagatc
cgtcatgggttgatcggagtgggtctgatcaatgtggaggaccgatcagggattctgtct
ctggacaaagactacaacaacatagggaagttcctgaaccgtatcctagggatggcagtg
caggagcagaatgccctgttccagtacttctctgacactctggcagctgtcatacagaac
gccaagaagaacggacgctacgacatgggcatcctggacctgggttctggggatgagaag
gtgaagaagattgaagccaagaagttcctgaccccaggctactccacctcaggacatgtg
gagctctacacggtgagtgtggagagaggcatgtcctgggaggatgccacccatgcctgg
gccgagcagagtggaccagatgatggcttctatgtacagataaggaacaacaagaagacg
gccatcttggtgcaggaggtgaacagtaagaagaggctgttcctggtctatagacctaat
acgggaaaacagcttaaactggaagcctatgctgacatcaagaagaagtgtaaaaaggtg
ctctcagatgatgccaaacagcactggattgaccagtacaagtcttcagctgagatctgc
gctcatgcatactggcgtggtaactgtaagaaggcgtcagtgggtctgcagtgtgaggtg
ggtctgcgctgcaggacgtactatgtgctgtgtggctctgtgctcagcgtgtggaccaag
gtggagggggtcctggcctccgtcagcggaactaatgtcaagatgcaaatcgtccgcctc
agaacagaggacgggcagaggatcgtgggcctgatcattccagcgaactgcgtctctcct
ctgaccaacatcctgtcgtcatctgaccagtctcagcaactggctgttcagcagcagcag
aagtggcagcagctgcaccctcagagcctcagccacgtacacaacacatag
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