Oncorhynchus tshawytscha (Chinook salmon): 112219683
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Entry
112219683 CDS
T05605
Name
(RefSeq) integrin alpha-1 isoform X1
KO
K06480
integrin alpha 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04510
Focal adhesion
otw04512
ECM-receptor interaction
otw04518
Integrin signaling
otw04810
Regulation of actin cytoskeleton
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112219683
04518 Integrin signaling
112219683
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112219683
09142 Cell motility
04820 Cytoskeleton in muscle cells
112219683
04810 Regulation of actin cytoskeleton
112219683
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112219683
04515 Cell adhesion molecules [BR:
otw04515
]
112219683
04090 CD molecules [BR:
otw04090
]
112219683
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112219683
Cell adhesion molecules [BR:
otw04515
]
Integrins
Integrin alpha subunits
112219683
CD molecules [BR:
otw04090
]
Proteins
112219683
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Integrin_A_Ig_2
FG-GAP
Integrin_A_Ig_3
Integrin_A_Ig_1
FG-GAP_3
VWA_2
FG-GAP_2
Motif
Other DBs
NCBI-GeneID:
112219683
NCBI-ProteinID:
XP_024236930
LinkDB
All DBs
Position
LG20:3207981..3289149
Genome browser
AA seq
1188 aa
AA seq
DB search
MLGRMQYIKLTTALALLPCVFSFNVDDKNGLNFHGSLEDMFGYSVQQFENSEGKWVLIGS
PLAGQPAKRTGDVYKCPVDRGPNPKCIKLELPENTTIPNLHEVKDNMTMGTTLVTNPQGG
FLACGPQYGYMCGQQTYISGVCTNVSSTFQVLNSIAPAVQECAKELDIVMVLDGSNSIWP
WNSIIEFLVKFLKNIEIGPKLSQVGIVSYGEQVIHNVNLSQFNNTLSLLGKVMNLEQQQG
VRTMTFLGIDTARKEAFTVERGARPGVKKVMIIVTDGESHDSHNLKNVTAECEKDDIERF
GIAVLGDYNRNNRSITEVKKFIEEIKNISSDPVGDHFFNVSDEFALLTIVDALGSRIFAL
EATSGNYTSSFEMEMSQAGFSAHNSKEGVMLGAVGAYEWNGTVVMHTDQGTMVPLNADFH
DPLDERKESLAGYVGYDVQSASTPNGVLYITGAPRHNHTGRVIVYKLDGQHITVTQVLKG
EQIGSYFGSVLQTVDVDQDSYTDILLVGAPMYMGPEREEQGQVYVFKLNEKGMFEHQATL
KPDNQTCCTSAHSHGCTNVRTNDPCGARFGTAIAEVSDLDLDGNRDVAIGAPFENDHRGA
VYIYHGAKKTIKEKYVQRIPGPGDGVKTKFFGQSIHGVMDLNGDGIIDVTIGGLGGASLF
WSKDVAELYANMTFDPSKINLQQPSKGCMLGGRETVCVKTRVCFSYSVKSEKDDTNSGTA
IKYSLTLDSLRAKSRAAFVNIDEKSERKAQATAKIIDNLCVEHLFAMKAKLDFRDPIMVS
LEFGLAEDTGPVLDGDLPTSLNKTIPLVDCGTDDKCIADLSLKAVPSIQSLVIKANKEKF
HVLITTRNSKDNAYNTKVMLSFTENINYVKVEPKEKDCSLNNTKVECAVGYPFLKSNVEE
VFKILFEVNPAHIWKEIQINVTATSDSDEVNSTLFDNSVRISIPVKYEAGLRFTTDRHMK
EDHIIVKEGEQHPRVFNGTSVIGEEVKISYTINRDVDMATPPLKLRVKYPYLSPRENILL
YLTRVTSSQDVRCHAGHLINPLKINHNNVHTLNLKKETLSDFLVGCKDHPCESFDCSIPH
VNNSQVNVTFRVWKPTFIKAEFTSLHMIVHATLENQNMDLFMLSTANNARDVKIQVSKEA
LGGIPLWIIIVSILIGLLILALVIIALWKAGFFKRKSMEDMEKEDMKN
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgctcgggcgaatgcagtatattaaattaacgacagcactcgcgttgctaccgtgtgtg
ttctcctttaacgtggatgacaagaatgggctgaatttccatggttcgctggaggacatg
tttggatactcagtccagcagtttgagaacagtgaagggaaatgggtacttatcggttct
cccttggccggccagccagccaaacggactggagatgtctacaaatgccctgtggatcga
ggaccaaaccctaaatgtatcaaactggagctgcctgaaaacacaacaattcctaactta
cacgaagtcaaggataacatgaccatgggaacgacgctggttaccaaccctcaaggaggc
tttctggcttgtggtccccagtacggctacatgtgtggtcagcagacgtacatctctggg
gtatgtaccaacgtcagctcaaccttccaggtactcaactccatcgccccggccgtgcaa
gagtgtgccaaggagcttgacattgtcatggtgcttgacggctccaatagtatatggcca
tggaacagcatcattgagttcctggtcaagtttctgaaaaatatcgaaattggacctaaa
ctgtcccaggtgggcattgtgtcgtatggagagcaagtcattcacaatgtgaacctcagc
cagtttaataacactctatccctgctgggaaaagtgatgaatcttgaacagcaacagggt
gtcaggaccatgaccttcctgggtatcgacacagcaaggaaagaggccttcaccgtggag
cgaggggcgcggcccggggtcaagaaggtcatgataatcgtgacggatggagagtcacat
gactctcataacctcaaaaatgtcaccgcagaatgcgagaaagacgacattgagaggttc
ggtattgcagtgcttggtgattacaacaggaacaacagaagcatcactgaggtgaaaaag
ttcattgaggagatcaagaacatctccagcgatcctgtgggagatcacttcttcaacgtg
tccgacgagtttgccttgctcaccatcgtagacgctctgggaagcaggatctttgccttg
gaagcaacgtcaggtaactacacctcgtcgtttgagatggagatgtcccaggcaggattt
agtgcccacaactctaaggagggtgtgatgctgggagcagtgggagcgtatgaatggaac
gggacagtagttatgcacacagaccagggtaccatggttcccctaaacgcagacttccat
gaccccctggacgagaggaaggagagcctggcggggtatgtgggttatgatgtgcagtcg
gcatcaactcctaatggtgtattatatatcacgggggcaccgcggcacaaccacacaggc
agagtcatcgtgtacaaactggatgggcaacacatcacagtcacacaagtgctgaaagga
gagcagattggctcctactttggcagcgttctccagacggtggatgttgaccaggactcg
tacacagacatcctgctggtgggagctcctatgtacatgggcccagagagggaggaacag
ggacaggtgtacgtcttcaaactcaatgagaagggcatgtttgagcaccaggccacgctg
aagccggacaaccagacgtgttgtacctcggcccactcccatggctgcaccaacgttcgc
acgaatgacccgtgtggcgcccgtttcggcaccgccatcgccgaggtcagcgacctggac
ctggacgggaaccgggacgtggccatcggggcaccgttcgagaatgaccacagaggagcc
gtctacatctaccacggagccaagaagacgatcaaggagaaatacgtccagcgtatccca
ggtcctggagacggagtgaagactaaattctttggccagtcaatccatggagtcatggac
ctgaacggagatggaatcatagacgttaccatcggaggtctgggaggcgcttctctgttc
tggtccaaggatgttgctgagctttatgccaacatgacctttgacccgagcaagatcaac
ctacagcagccctctaaaggctgcatgttgggcgggagggaaactgtgtgtgtgaagacc
agggtctgctttagctacagcgtcaagtctgagaaggatgacactaactcgggcacagcc
attaagtacagcctgacgctggactctctgagggcgaagtcgagggctgcgtttgtcaac
atagacgagaaaagtgagaggaaggcccaggccaccgccaagatcatagacaatctgtgt
gtggagcatttatttgccatgaaggctaaattggacttcagagacccaatcatggtctcc
ctagagtttggcctggctgaggacacgggtcccgtcctggatggagatctaccaacgtca
cttaacaaaacgattcctttggtggactgtgggaccgatgacaagtgcatagctgaccta
tcgctgaaggctgtgccaagtatacaaagtcttgtgattaaagcgaacaaggagaagttc
cacgttctgatcaccactagaaacagcaaagacaatgcgtacaacaccaaagttatgctg
agctttactgaaaacataaactacgtcaaggtcgagcccaaagaaaaagactgtagtcta
aataataccaaagttgagtgtgctgtgggatatccattcctcaaaagcaatgtagaggag
gtctttaagatcctgtttgaagtcaaccctgcacatatctggaaggaaattcagatcaac
gtaactgcaaccagtgacagcgacgaagtgaacagcaccctttttgataactctgtgaga
atctccatccctgtgaagtacgaggctggacttagattcacaactgacaggcacatgaag
gaggaccacatcatagtgaaagagggagagcagcaccccagggtcttcaacggcaccagt
gtgataggagaagaggtcaagatcagctacacgattaatcgggatgtggatatggcgact
cctcctctgaagctaagggtgaagtacccgtacctctctcccagagagaacatcctgctt
tacctgactcgtgtcacctcctcacaggatgtgagatgccatgccggccatctgattaac
cctttaaagatcaaccacaacaatgtccacactctcaaccttaaaaaagagaccctcagt
gacttcctggtgggctgtaaggaccacccatgtgagtcatttgactgctccatccctcac
gtcaacaacagccaggtcaatgttaccttcagggtgtggaagcccacctttatcaaagca
gagttcaccagccttcatatgatagttcatgccaccctggagaaccagaacatggatctc
ttcatgttgagcaccgcgaataacgccagagatgtgaagatccaggtgtctaaagaggct
ttgggaggtataccgctgtggatcattatagtcagcatcctaataggacttctcattctg
gcactggtcatcatcgccctatggaaggctggatttttcaaaagaaaatccatggaggac
atggagaaggaggacatgaagaattaa
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integrated database retrieval system
