Oncorhynchus tshawytscha (Chinook salmon): 112219689
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Entry
112219689 CDS
T05605
Name
(RefSeq) sorting nexin-18
KO
K17923
sorting nexin-9/18/33
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112219689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112219689
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112219689
Membrane trafficking [BR:
otw04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
112219689
Macropinocytosis
Sorting nexins
112219689
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
112219689
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BAR_3_WASP_bdg
PX
SH3_9
SH3_2
SH3_1
Vps5
XFP
SH3_10
Motif
Other DBs
NCBI-GeneID:
112219689
NCBI-ProteinID:
XP_024236942
LinkDB
All DBs
Position
LG20:3436262..3441815
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AA seq
573 aa
AA seq
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MAVRARALYDFSSENPGEISITENEVVTLYSEQDVEGWLEGTNSRGETGLFPASYVEILT
NDSSDISSNNNGMSADHGQAELPSSGYDSSYHSQSHSRAESITVPNPSHSAYPVQTPQHH
SYPTSQGSDDDWDDDWDDSSTVADEPGTIHDNDGTSSTAYTVTTSLPERRSSAQAKSSAT
VGKNLNRFSTFVKSGGEAFVLGEAAAFVKDGDKICVVMGQYGPEWQEDPYPFACSIDDPT
KQTKFKGMKSYMSYRLTPSHTQSQVNRRYKHFDWLYARLVERFPVISVPHLPEKQATGRF
EQDFVSKRRKGLIWWMNHMTSHPVLARCDVFQHFLTCPSTDEKTWKMGKRKAEKDELTGA
NFFLTISTPAVPLDLQEVESKIDGFKAFTKKMDENCLLVNATINEFARKQITGFKKEYQK
VGQSFKLLGQAFEMDQQAYSVGLNRAIAFTGEAYEVIGDYFAEQPRQDLDPISDLLDLYK
GHLANYPDIIHVQKGALTKVKECQKQEGEGSTINERCNIISCATLAEIQHFHRTRVRDFK
SQMQHHLQQQISFFQKITGKLEEALQKYDEYII
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggcggttagagcgagagcgttgtacgactttagttccgaaaatccaggagagatatcg
attactgagaacgaagttgttactttgtacagcgaacaagatgtcgagggatggttagag
gggactaacagcagaggggagactggtctttttccagcctcatatgtggagattctcaca
aatgattcatctgacatctcctccaacaacaatggcatgtcggcagatcatggtcaagcc
gagttgccatcaagtggatatgattcatcataccattcccagtcccactctcgtgctgag
agcattacagtcccgaacccttcccactctgcttatcctgtgcaaactccacagcaccac
agttacccgaccagtcaaggtagcgatgacgactgggatgatgactgggatgacagctcg
actgtggcggatgaacctggaacgatacatgacaatgatggaactagttccacagcatac
acggtcactaccagtttacctgagagacgtagcagtgcccaagccaaaagttcagccaca
gtgggtaaaaacctcaacaggttttcaacctttgtgaaatcaggtggagaggcttttgtg
ttgggcgaggcggctgcctttgtcaaggacggggacaagatctgtgttgtcatgggccag
tatgggccagagtggcaagaagacccatatccatttgcctgctctatcgatgaccccacc
aaacagactaaattcaaaggcatgaagagttacatgtcatacagactaactccctctcat
acccagagccaggtgaatagaaggtacaagcactttgactggctctatgcccgcctagtg
gaacgattccctgtcatatcagtcccccatctgcccgagaaacaggccacggggcgcttc
gaacaggactttgtctccaagcgcagaaaaggtttaatatggtggatgaaccacatgacg
agccatcctgtcctggccaggtgtgacgtcttccagcacttcctcacctgccccagcaca
gacgagaagacgtggaagatgggcaagcgaaaggcggagaaggatgagttgactggcgct
aacttcttcctgaccatctccaccccggccgttccactggacctacaggaggtggagagc
aaaatagacggtttcaaagccttcaccaagaagatggatgagaattgtctgttagtcaac
gctaccatcaacgagttcgccaggaagcagatcaccggcttcaagaaagagtatcagaaa
gtgggccagtccttcaaactgctgggccaagcctttgagatggaccaacaggcctattcc
gtaggactgaaccgtgccatagcattcacaggcgaggcctacgaggttataggagactac
tttgccgagcagcccagacaggatttggaccccatatcggacctgctggacctgtacaag
ggacacctggccaactaccctgatatcatccatgttcagaaaggtgcccttaccaaagtg
aaggagtgccagaagcaggaaggggagggatcaaccatcaacgagcgttgtaacatcatt
tcctgcgccacgctggctgagatccagcacttccaccgtacgcgcgtacgtgacttcaag
agccagatgcaacaccacctccagcagcagatcagcttcttccagaagatcactgggaag
ttagaggaggcactgcagaagtacgacgaatacataatataa
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integrated database retrieval system
