Oncorhynchus tshawytscha (Chinook salmon): 112219700
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Entry
112219700 CDS
T05605
Symbol
sec16a
Name
(RefSeq) protein transport protein Sec16A isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112219700 (sec16a)
Membrane trafficking [BR:
otw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
112219700 (sec16a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
112219700
NCBI-ProteinID:
XP_024236955
LinkDB
All DBs
Position
LG20:20960..90011
Genome browser
AA seq
2391 aa
AA seq
DB search
MQPPPRTGPPGASGPPPAGVGPNAFRRTRPHKHTGAAVMAGLTAQPMTDPFAFGRQAPPP
MATGHLPPPNSSPLPLQALPPGMYHQAGMGQGLHQPQPLDSAQAGAVPLGPPPPSTPGVS
ILTPHGTASPVPFPGQQPGPPGHAPPSAEQGYFNSREPAPSMTPGHLPMASAPMSGQAPY
GQDHGGDHHPQAMPFKPVPPVLSQWVPDHGSRPPSVQNYFQPTSDPLPQVCNAPPQSQIS
PHTPLPHNTPPTHPQQQHQPQPPPQHPDRPTSSQWPDLAGANTPQQHNAHFQAQTYFSQS
SDTLDSWFNQHPQDLVYHQMGAGPGLARPDSARTHYRHDSAGSHHGSHYGSYHASTPGPA
PVPFIPDGTISMFFKGNDVENEETLAGEGARAVNGLQDFQPSHNHQQMSSPQPQANPVVG
AEATHSYRGPPPQAGQSLTYMNDGNFPGAGKPIQQKPAEAQFDHVENLECVPNQEVLPSE
PQSNPAVAAAHGGDCYEAGPNLETPDSVPRPIRSASVSSSYSNLSHGSGTVPRRHQGVVG
TFIQQESPRPSEDAFSSAAAGGYFEQIDTSPAGDMAVAYQSIPERMCHSQPPTPSPPKPT
GIFQASANSSFEPVRSHSVAVRPAEVDRARMVAERGSDSLPGNLEQPPDNLENIYGAATG
HTQAGDGAGAPPLAYPLSHSHSRPSSRAHVAHRPCESPATTLWAQHDPASLGTNILLVPA
APPVLAPLREPSAEVIQPPEDGSLDLQPPQHAPPPSQHPSENLENPPKVSEGDTSDSQPN
LGYASLLVSESLHQPVLIAPPTSNYSVIPPSNPALAANQVSPREATVPVRPPSQAQGASA
AQPGPPLLSNQNPLFAPTPMSFSVASSQSPLNLVRDDREGVKPEITPPPSQSQPARSPLS
KVQSTCRNNHSSLPVNLQAPLPAAPGAANYNQLSNYELLDFSMHQSQIPNQAAGLPPLSL
QQGLPLASNAPGFYLQVTKDAQQVSRGNGDASTAQMPADPMPPPVAPNTQQPPSEPPMVP
QPQPGHQGQGDDPAAPLSGAPPPQGQYPTPMQGPATGNAPTPSAAYPGPRGHVPLANPHP
PGTGVPSAQPAPTDPPRPPSSLGSQLGYGPPPPGQVYGGYYGGAYPEYPDGRGSYLPAQY
PPAPVDPRAQQYYQDDPYMIADPRYGRYEGANPAYPPYREPQPERPSSRTSQYSDRPSSR
QGFPPEEYQRANRSAYDDYYAEYYKNQYGDRSRWEGYNASAGTYDPRYRDYYDQNYWYNY
NPEAYRGREAAYYNQQPSQQYPAATTRPQGYDDKWRYYPGYDASFDDDYRRQRDQYKDDF
DRRSVHSEQSAHSLHSSQSHRSRRSSFSSRSQQSEVYRSQPDLTAVYDPTVSTLPVDYSY
GQYPEPMDPGQSFSQYPYTSGYQADNSTWVVAEQPPPRPVTPEKYSVSHRCARFGPGGQL
IQVLPNLPSAGQPALVEIHNMETMLQDTPDQSELRSFPGPLLKEETHKVDVIKFSQNKGL
ECARNNDLLDKDSAALLWDFIVLLCRQNGTVVGTDIADLLLKEHRSVWLPGKSPNEANLI
DFNNEPLARAEEEPGTGPLSLLSDTFMTVPENIGKETERFRELLLFGRKKDALEAAMKGA
LWGHALLLASKMDSRTHARVMTRFANSLPINDPLQTVYQLMSGRMPASATCCGDEKWGDW
RPHLAMVLSNLTHTLDLDTRTITTMGDTLASKGLTDAAHFCYLMAQVGLGVFTKKSTKMV
LIGSNHSLSFFQFASNEAIQRTEAYEYAQSLGSQPCSLPNFQVFKLIYACRLAEAGLCAQ
AFHYCEVISRSVLMQPSYHSPVFTSQLMQMSEKMRFFDPQLKEKADQELFNEPEWLINLR
QLDGQMRTGVIVYNADRATPQQYDCSTPNSELDQTSPPEPYAHPLDMVGHTSDNPLMTSL
MPGPPQQGVQLMPPAPPTILQDGMVSQPPHPNEGVQFYPVPPSLPGPPGQIPLSGFPPQG
SGFVQPYQPQQPQPDKKDMFPGAPHQQMAPPQHQQQMMPPQMQQPQKMPSDNYQPTGPPE
LQPPPMSTSPQRNTFTPQMDFYDQMAHMGPGRRSRTTSQSSMQMQPPGRRSRTMSESSTH
SGGRERSNSAAKQSSPPPPSIPEQAKKDSPKKGGGGGGWLNWLYRKGKNEAHLPDDKNKS
IVWDEKKQKWVNLDEPEEEYKPPPPPPSGFPKMLGPIPGQGGPGGPPTGGPPVNMFSRRA
GTKSRYVDVLNPGGPRAKPGGSAPAPSDFFAPLAPMPMPANLFVPGAEEQQPMVGNVPET
GGNQEQSDPNPSAVPQMFNPTLLPPGPVGPPIAAGSPSGELSRSSSMSSLSLELSPHINQ
VPPTPQPPPQGAPPSGGVTFYNPAQFAQASTPSGRLLSGRLGGQRAYPVLK
NT seq
7176 nt
NT seq
+upstream
nt +downstream
nt
atgcagccccctcctcggaccggcccccctggtgcatccggcccccctcctgccggcgtt
gggcccaatgccttccggaggacaaggccccacaagcatacaggagcagcggtcatggcg
ggactaacagcccagcccatgacagacccctttgcatttggcaggcaagcccctcctcct
atggctacaggtcacctgccgccacccaatagcagccctctgcctttgcaagccctgcct
cccggtatgtaccaccaggctggcatgggtcaggggctgcaccaaccacaaccactggat
agtgcacaggctggggctgtgccccttggcccaccaccgccctctacccctggggtaagc
atcttaacccctcacggtactgcgtcccctgtccctttccctgggcagcaacctggcccg
ccaggccatgcaccaccaagtgcagagcagggctattttaactctagggagccagcaccc
tcgatgaccccaggacaccttcccatggcctcagcccctatgtctggccaagcgccttat
ggtcaggaccacggaggagaccatcaccctcaggcgatgccctttaagcctgtgcctccc
gttttgtctcagtgggtgcccgaccatgggagccgccccccgtcggttcagaactatttc
caacccactagtgatcctctaccccaggtttgtaatgcccctccccagtcccaaatatct
ccacacacacccttgccccacaacacccctccaacacacccccagcagcaacaccaaccc
caaccaccacctcagcacccagacaggccaactagctcccagtggcctgacctggcaggt
gcgaacacaccccagcaacacaacgcccattttcaggctcagacctacttcagccagagc
tcagacaccctggactcctggttcaaccagcacccccaggacctggtctaccaccagatg
ggagctggccctggcctggctcggcccgactcagccagaactcactatcggcacgactcg
gccgggtctcaccatggatcccactatggatcttaccatgcatcaacccctggcccagcg
ccggtccccttcatcccagacggcaccatctccatgtttttcaaaggaaacgacgtggag
aacgaggagaccctcgccggagagggagccagagcagtgaatgggctccaggacttccag
ccctcccataatcaccagcagatgtcatcccctcaaccccaagccaacccggtggtgggt
gcagaggccacccacagttaccgtgggccccccccacaagctggccaatcattaacctac
atgaacgatggtaactttcctggagctggcaaacccatccagcagaaacctgctgaggcc
cagtttgaccatgtggagaacctggagtgtgtgcccaaccaggaggtcctacccagcgag
ccccagagcaaccctgctgtagcagccgcccacgggggagattgctacgaggcaggcccc
aatctggagacccccgactctgtcccccgacccatacgttctgccagcgtgtcctctagc
tacagcaacttgagccacggcagtggcacagttccacgccggcaccaaggagtggtgggc
accttcatccagcaggagagccctcggccctcagaggacgcattctcctcagctgctgct
ggaggctactttgagcagattgacacctctccggccggggatatggctgttgcttaccag
agcatcccggagagaatgtgccacagccaaccccctacgcccagtcctcccaaacccacc
ggcattttccaggctagtgccaactcctcctttgagcctgtgcgctcacacagtgtcgca
gtgcgcccagcggaggtggaccgtgcccggatggtggcagagaggggctctgactctctg
cctgggaacctggagcagcctccagacaaccttgagaatatctacggagcagctacaggg
cacactcaagctggggatggagctggggcacctcctcttgcataccctctgagtcactcc
cactccaggccctcgtcccgggctcatgtggcccaccggccctgtgagagccctgccacc
accctgtgggcccaacatgaccccgctagcctgggaaccaacatcctgctggtccccgct
gcccctccggtccttgccccactgcgagagcccagtgccgaggtcatccagccccccgag
gatggctctttggaccttcagccccctcaacacgcccctccgccctcccagcacccctct
gagaacctggagaaccctcctaaggtgagtgagggggacacgtctgactcgcagcccaat
ctgggctatgcctctctcctggtgtctgaatcgctccaccagcccgtgttgattgcccca
cccacctccaattacagtgtgattcctcccagtaaccctgcactcgcagccaatcaggtc
agccccagggaggccacagtacctgtgaggccaccctcgcaggctcaaggggccagtgcc
gcacagcccggtcctcccttgctctccaatcagaacccattatttgcccctacaccaatg
agcttcagcgtcgcctctagtcagagccctctcaatcttgttcgggatgacagggaaggg
gttaaaccagagatcacgcccccaccatcccagtcccagcctgctcgctcccctctctca
aaggtccaatcaacgtgcagaaacaaccattcttctctacctgttaatttgcaggctcct
cttcctgctgctcctggtgccgccaattataatcagctctcaaattacgagctgcttgat
ttttctatgcaccaatctcagatcccaaaccaagccgcagggctgccacctctctccctc
cagcagggcctgcccctcgcgagtaacgctcctgggttttacctgcaggtcaccaaagat
gctcagcaggtgagtagaggcaatggggacgcctccacagcacagatgcctgccgatccc
atgccccccccagtggccccaaacacccaacaaccaccctctgagccacccatggtaccc
cagccacagcctgggcaccaaggccaaggagatgaccctgcagcccctctcagtggagca
ccaccaccgcaagggcagtacccaaccccaatgcagggtcctgccacagggaatgcaccc
accccctctgcggcttaccctggacctcggggacatgtgcctctagccaatccccatcca
ccaggaaccggggttccttcagcccagccagcccctacagacccaccgcgacctccctcg
tctctgggaagccagctggggtacggcccacctcccccagggcaggtgtatgggggatac
tacggaggtgcctacccggagtacccagatggcagaggatcatatcttcctgctcagtac
ccacccgcacctgtggatcccagagcacagcagtattatcaggatgacccatacatgata
gcggaccctcgctatggcagatatgaaggagccaacccggcctaccccccatacagagag
ccccagccagagagacccagctccagaaccagccagtactcagacagaccctcctccagg
caaggtttcccccccgaagaatatcagagagctaaccgaagtgcttatgatgactactat
gcagagtattacaaaaaccagtacggagaccggagcaggtgggagggctacaatgcttca
gcaggcacttatgacccccgctacagagactactacgaccagaactattggtacaactac
aaccctgaggcctaccggggcagggaggcagcctactacaaccagcagccctcccagcag
taccctgccgctaccaccaggccacaaggctatgacgacaagtggcgctactatcctggt
tacgatgccagttttgacgatgactaccggcggcagagggaccagtacaaggacgatttt
gaccgacggagcgtccacagcgaacagtcggcccacagtctacacagctcccaaagccat
cgcagccgacgcagcagctttagctcccgctcacaacagagcgaggtgtacaggtcccag
cctgacctgacagcggtttacgaccccactgtttctaccctgcctgtggactactcctat
ggacaatacccagaaccgatggatcccggacagagcttcagccagtacccctacacctcg
ggctaccaggcagacaacagcacctgggtcgtcgctgagcagcctcctcctcgtcccgtt
actccagagaagtactcggtatcccaccgctgtgcccgcttcggcccaggtggtcagctg
atccaggtcctgcccaacctcccctcggccggccagcctgctctagtggagatccacaac
atggagacgatgctgcaggacacaccagaccaatccgagctgcgctccttccccggaccg
cttttgaaggaggagactcacaaggtcgacgtgataaagttctcccagaacaaaggcctg
gagtgtgcccgcaacaacgacctcctggacaaggactcggctgccctcctctgggacttc
atcgtgctgctgtgtaggcagaacgggaccgtggttgggactgacatagctgatctgttg
ctgaaggagcatcgctcagtgtggttgccgggcaagtcacctaacgaggccaacctgatt
gacttcaacaacgagccactggcgcgggccgaggaggagcctgggacgggaccattgtcc
ctcctatcagacaccttcatgactgtccccgagaacataggcaaggaaacggagcgcttc
agggaactgctgctatttggtcgcaagaaggatgccctggaggcagccatgaagggagct
ctgtggggccacgccctgctgctggccagtaagatggacagccgcacacatgctcgcgtc
atgaccaggtttgcgaacagtctgcccatcaacgaccctctgcagacagtgtaccaactg
atgtctgggaggatgcccgcctcagccacttgctgtggggatgagaagtggggcgactgg
cgcccccatctggccatggtgctatccaacctgacccacactttggacctggacacacgt
accatcaccaccatgggagacactctggcttccaaggggctaaccgatgcggcccacttc
tgttacctgatggcccaggttggtttgggggtgttcaccaaaaagagcaccaagatggtt
ctaatcggctcaaaccacagtctgtcgttcttccagtttgcgtctaacgaagcgatccag
aggacggaggcatatgagtatgcccagtctctaggttcccagccctgctccctgcccaac
ttccaggtgttcaagctgatctatgcgtgtcgcctggccgaggccgggctgtgtgctcag
gccttccattactgtgaggttatctccaggagcgtgctcatgcagccgtcctaccactct
cctgtgttcaccagtcagctgatgcagatgtctgagaagatgcgattcttcgatccacaa
ctgaaggagaaggcagatcaggagctcttcaacgagccagagtggctgattaatctgaga
cagctggatggacagatgaggactggagtgattgtatacaatgcagacagggctactcct
cagcagtatgactgcagcacccccaattctgagttagaccagaccagcccgcctgagcca
tatgcccaccctctggacatggttggccacacctctgacaaccctctgatgacatcactc
atgcccggaccacctcagcaaggggtgcagctgatgcctccagctcccccaactatcctc
caggacggaatggtctcccagccgccacaccccaacgagggggtccagttctacccagta
ccccccagtctccctggaccacctggccagatccctttatcagggttccctccccaaggc
tctggctttgtacaaccttaccaaccccagcagccccaaccggacaaaaaggacatgttt
cctggagccccgcaccagcagatggcgccaccacagcatcagcaacagatgatgcccccg
caaatgcagcagccacaaaagatgccctctgacaattatcagccgacgggtccaccggaa
ctacagcctcctcccatgtccacctctccacagaggaacaccttcacgcctcagatggac
ttctatgaccaaatggctcacatgggcccaggaagaagatccaggactacttcacagtcc
tcaatgcaaatgcagcctccaggtcgccgctcccgcaccatgtcggaatcttccacacat
tccggaggacgagagaggagcaactcggcagccaagcagtcctctccgcctccaccctcc
atccctgagcaggccaagaaggactcacctaaaaagggaggtgggggtggcggttggctc
aactggctctataggaaggggaagaatgaagcccaccttccggatgacaaaaacaaatct
attgtctgggacgagaagaaacagaaatgggtgaacttggatgagccagaggaggagtac
aagccccctcctcctcctccctcgggcttccctaaaatgctgggacccataccgggacaa
gggggtcctggaggtccccctactggtgggccgcctgtcaacatgttctccaggagagca
ggtacaaagagccgctacgtggatgtcctgaacccaggtggaccccgtgccaagcccggt
ggatcggcacctgccccgtcagacttctttgccccgttggctcccatgcccatgccagcc
aacctgtttgtgcccggggcagaggaacagcagcccatggtgggtaatgtcccagagaca
ggagggaaccaggaacagagcgaccctaaccccagtgctgtgccacagatgttcaaccca
acattgttaccgcccggtccagtggggccccctattgccgctgggtccccgtcaggagag
ctgtcacgttctagctcaatgagttctttatcacttgaattgagtccgcatataaaccag
gtgcccccgactccgcagcctcctccccagggagctccaccctctggaggcgtgacgttc
tataaccccgcccagtttgcacaggcgagtactccatcgggacggcttctgtctgggagg
ttgggcggtcagagggcatacccagtgctgaagtag
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integrated database retrieval system
