Oncorhynchus tshawytscha (Chinook salmon): 112219711
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Entry
112219711 CDS
T05605
Name
(RefSeq) protein ERGIC-53 isoform X1
KO
K10080
lectin, mannose-binding 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112219711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112219711
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
otw04091
]
112219711
Membrane trafficking [BR:
otw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
112219711
Lectins [BR:
otw04091
]
L-type lectins
112219711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_leg-like
Bact_lectin
Lectin_legB
RebB
IFT57
Laminin_I
GCN5L1
DUF5063
Motif
Other DBs
NCBI-GeneID:
112219711
NCBI-ProteinID:
XP_024236990
LinkDB
All DBs
Position
LG20:complement(1190860..1216862)
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AA seq
510 aa
AA seq
DB search
MAVSIGRCLAADACLLILTLTFHHSNSDNIVAGASTEEAPHRRFEYKYSFKGPHLSQTDG
NIPFWVHSGNAIPSADQVRITPSLRSQKGSVWTKNTVNFDHWEAEVTFRVSGRGRMGADG
LAIWFTTAQGLDGPVYGAADNWNGIGIFFDSFDNDGKKNNPAVLVVGNNGKLVYDHPNDG
TTQALGTCLRDFRNKPYPVRAKITYYKKTLTVLINNGFTPDKDDYEFCTKVDKMIIPQEG
YFGISAATGGLAGDDHDVLSFLTFRLTEPGQELPAPEAEMPKEEQDKYQEEFENFQQELD
KKKEDYQKEHPEVQREPIEDMYESVNDREIRQVFEGQNQIHLEIKQLHRQLAMILDEQNR
YVSVVTDEISKRQVELVGQAPSQEMGAVVATQQEILRNLNELRNSFHESLKQIGATQHQA
NPVSMGTYETVQHFSEIQEHLHVVKRNIEHLITRNGSPSENQGEKCPDPPKMPSCLGTIH
FLVFVVIQSVLFFSYIVYKSQQEAAAKKFF
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtccataggaaggtgtctggctgctgatgcttgtttattaatattaacttta
acatttcaccacagtaattccgataatatcgttgccggtgcatcgactgaagaagctcca
caccgtcgatttgaatacaagtacagtttcaagggaccgcacctgtctcaaaccgacggg
aatattcctttttgggtacacagtggaaatgccatccccagtgccgaccaggtccgtatc
accccctctctcaggagtcagaagggctcagtctggaccaaaaacacggtcaactttgac
cactgggaggctgaggtgacctttcgtgtgtctggacgggggaggatgggagccgacggc
ctcgcgatatggttcaccactgcacaaggcctagatggtcctgtctatggagctgctgac
aactggaacggcatcggcatcttctttgattcctttgacaacgatgggaagaaaaataac
cctgctgtgctggtggtgggaaacaatggcaaacttgtttatgatcacccaaacgatggc
acgactcaagccctgggaacatgcttaagagactttcgtaacaaaccctatcctgtcaga
gccaaaataacatactacaagaagacactaacggtgctgatcaacaatggtttcacgcca
gataaggatgactatgagttctgtaccaaggtggacaaaatgatcattcctcaggagggc
tactttggcatctcagctgccacgggtggtctagcaggtgatgaccatgatgtcctgtcc
ttcttgacgttcagactaacagaacctggccaagaactgcctgcacctgaagcagagatg
cccaaggaggagcaggacaagtaccaggaggaatttgagaactttcagcaggagctggac
aaaaagaaagaggactaccagaaggagcatccggaagtccagagagaacccatcgaggac
atgtacgagagtgtcaacgacagggagatccgccaggtatttgagggtcagaaccagatc
cacctggagatcaaacagcttcaccgtcagctggccatgatcctcgacgaacagaaccgc
tatgtttctgtggttacagacgagatatccaaacgccaagtggagttggtgggacaggct
cctagtcaagaaatgggtgcagtggtcgcaacacaacaggagatactgagaaacctgaac
gagttgagaaactctttccatgagtctctgaagcagatcggtgccactcagcaccaagcc
aacccagtgagcatggggacatatgagacggtgcaacacttcagcgaaatccaggaacat
ctacacgtggtcaagaggaacatcgaacaccttatcacacgcaatgggagccccagtgaa
aatcagggagagaaatgccctgaccctcctaaaatgccttcctgtctgggtactattcac
ttcttggtctttgtggtcatccaatcagtcctgttcttcagctacatcgtgtacaaaagt
caacaagaagcagcagcaaagaaattcttttga
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