Oncorhynchus tshawytscha (Chinook salmon): 112219715
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Entry
112219715 CDS
T05605
Name
(RefSeq) mucin-5AC isoform X1
KO
K15198
transcription factor TFIIIB component B''
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
otw03021
]
112219715
Transcription machinery [BR:
otw03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
112219715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-bind_7
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
112219715
NCBI-ProteinID:
XP_024237003
LinkDB
All DBs
Position
LG20:1682428..1705056
Genome browser
AA seq
2830 aa
AA seq
DB search
MLRRSRISVRPNVRPAGRGPASSQDTPPSQEAPAAVSQASEDLPQAGGQCVKDTTTTAVL
EASTESTTPREDGKDPNGEASSSTPSAGLQRRKRFSVMPNLAKPRVAATPALTRSSPRTP
KSPVRAGTETPAPTPEAPEAPRQTDSGPPQGMRSPRRRPSGGSRQAKGQPKPSPLSPASP
GPTTTSLGNVAVENSSSSQQTPQAAGKGSIQSDLLKKTPIIKVPSTPLEMVPSSSLPDKE
GISVSERAKTLVARSVSGGLTGLAPGKSRLSRFLNDPTDLQRLAKARKLRELLRQEMNKE
KKRSKAKVCVSEYTLDPSKMTMRDLIYYLPDTNPMTSYLVEEQRENETVLPLTPPREESP
ERPPTPEVPAEIASQGDEDEDEDDDGVMVPRVKVAEDGSLIIDEESLTVEVLRQKGPNPA
DDRDPIFERGSTTTYSSFRKGTHVKPWSNKETDMFFLAISMVGTDFSMIGQLFPHRGRTE
IKNKFKKEERANSWRIDKAFKEKRRLDHEFFTSLLEKILAAEAKRNKNKSPTEKIRIKKK
IRQKEKNAAKQLSDVEEEGLDAEMDTEEVEGEKENENVSNEGTTLSSAPTPKRKRKSRDG
GGESSPEEAKDGKKKKIDLITSDQEEAGLPEDSEAGPPESSKQAEGPVEAAKGPVVIKPA
QLSRGRSQRPLPNLGRKWGQRGPEPNTKPNVKDGATPTEEENTEEGLSEEQVDKDASPSV
SQKEEKKAGKLSSSEGEEEEASDKPIKPTRYGRLPKKTQLLNYPAKEDGDSPSDSAPTPA
SDGSPSTMPKSKPATRRAKIKPGPALPGRMGQSDSAPTPASDGSPSTMPKSKPATRRAKI
KPGPALPGRMGQSTARKSKLVTLRASQSEDEDEDEEEGAWREEAQAEEDTHNPTSPEKEN
QAPAFIPMSLRSPQPVATEVEETMEEVKGLDISVNMPDVLGISHDAFCPDSSCERAQGAD
MGTVPCEHQLDLLVDVIDFLSPDNMEVSEESYNEAARTLLAIGNLTHLSQAAEAFTAGAD
DIITEERSNEDQLYQMTPQPTDQLQTSTIPSESLRVTEASQIADDSVPVASSTTASVPVT
TTTASIPGSKITASVIITMATASVPVTTTTSSPPVNLTTTASIRVTTSTASVPVPQSSDT
PTLETPPIEEGPLRQMEGTDIGHASKMESGSEVSEGSEQQTTSQTRRSHFPKVKPNLGRA
ARTTQPKQTTTTLSEPPQTTTTLSEPPQTTTTLSEPPQTTTTLSEPPLEPMLNITTTPEP
QPTMHITIEPPLPSESINTESETQPKQRTTTHSKSQPTTTHSMHQPTTNIIPHSEPPPIK
KTRIAYSKPQPTLNTTTNTLSKQQSTQSTTILSQPQPTSSLEQPGPVTLRPIVPESPLRS
SGEVKGHDGRKGNTSSSLSAGGSQSGTSDSDQPKQTGPVTRRARLPKPKPNLGLTAKAAT
RSAVQLPESRPSPEVQTPEEADEVPMEIQQIHQVVPLSDIIDTTQEEIQQIHQVIPHPPI
EEGPLRQREGTDIGHASQVESGSEVSEGSEQQTTSQTRRSHFPKVKPNLGRAARTTQPKQ
TTTTLSEPPLDSMLNIITTSEPQPTMHITIEPPLPSESINTESETQPKQRTTTHSKSQPT
TNIIPHSGPQPIQRTRVAHSKPQPALNTTTQSEPPQPTLNSPTNTLSKQQSTQSTTILSQ
PQPTSSLEQPGPVTLRPIVPESPLRSSGEVKGHDGSKENSSSSLSAGGSQSGTSDSDQPK
QTGPPTRRARLPKPKPNLGLTAKATTRSAVQVPERRPRPEVQTPEEADEVPMEIQQIHQV
SPLCDIIDTTQEEIQQIHQVIPHPTIEEGPLRQREGTDIGHASQVESGSEVSEGSEQQTT
SQTRRSHFPKVKPNLGRAARTTQPKQTTTTLSEPPQTTTTLSEPPQTTTTLSEPQPIQRT
RVAHSKPQPALNTTTQSEPPQPTLNSPTNTLSKQQSTQSTTILSQPQPTSSLEQPGPVTL
RPIVPESPLRSSGEVKGHDGRKGNTSSSLSAGGSQSGTSNSDEPKLTGPPTRRARLPKPK
PNLGLTAKAATHSAVQVPESRPRPEVQTPEEADEVPMEIQQIHQVFPLCDIIDTTQEEIQ
QIHQVIPHPTIEEGPLRQREGTDIGHASQVESGSEVSEGSEQQTTSQTRRSHFPKVKPNL
GRAARTTQPKQTTTTLSEPPQTTTTLSEPQPIQRTRVAHSKPQPALNTTTQSEPPQPTLN
SPTNTLSKQQSTQSTTILSQPQPTSSLEQPGPVTLRPIVPESPLRSSGEVEGHDGSKENS
SSSLSAGGSQSGTSDSDQPKQTGPPTRRARLPKPKPNLGLTAKAATRSAVQLPESRPSPE
VQTPEEADEVPMEIQQIHQVSPLCDIIDTTQEEMEQIHQVIPLTDVIDSTQGDISLFTEG
SFFSQQSDAVFIQHSETSVSTAPLDQAQSDPDEPIFILSLTEIPVLPAGEENGCTSQTLS
EPFFFLPDAGAQLQQSSDIVAPGGSLEKGNAGVLCEVPEPMSVDEVLPQPSYTSIKEVES
GSTAGPVGVCASAKPSEDSMADAETSEDTHPPSKKRKAPERARRDKLQVRPNTAVREQTS
CSAPAKEAVSPITPDQTPSLTTTTLDTYHLPASSPLAQPGPSVTGTASQQGTVGCFDHTE
TEHTPTGGEDNSSGAESQAARQITPLAMSGPLSRPGRRPRGFLSFMSNKNASPVAAPPRG
TRAAARRPQVNTTRPGGKRAAPAPSTTTRTMPSPPIMHYTTTPTRATRTTTKPDFSARVT
QEKPSDALALHSDPEPSTSLCTTATESSQVPAAQSSASPCVDSGSADEEPINVSQYFFSD
IFTEVEENEG
NT seq
8493 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgcagatccaggatcagtgttcgtccgaacgtcaggccagcaggcagagggcca
gcctcctcccaggacactccaccttcccaggaggctccagctgcagtctcccaggcctcc
gaggaccttccccaggcagggggccagtgcgtgaaggacaccaccacaactgcagtgcta
gaagcctccacagagtccaccacacccagagaggatggaaaagacccaaatggcgaggct
tccagcagcaccccctctgccggtcttcaaaggaggaagcggttctctgtcatgccaaac
cttgccaaaccccgggtggctgccaccccagccctcacccgctcctcccccaggaccccc
aagtcccctgtgagagcgggcactgagactccagctccaacccctgaggctccagaggcc
cccagacagacagattctggacccccacagggcatgagatccccaaggcggaggccctct
ggaggtagtaggcaggccaaaggacagcccaaacccagtccactgtccccagcttcccca
ggccctacaacaacctctctggggaatgtggcagtggagaactcatcctcgtcacaacag
accccgcaggcagcaggcaaaggcagcatccaatcagatctcctgaaaaaaacaccaatc
attaaagttccatccactccgttagagatggtcccatcgtcctcccttccagacaaagag
ggtatctcagtatcagagagagctaagactctggttgccaggtctgtgtctggtgggctc
accgggctggcacctgggaagtccaggcttagcaggttcctgaatgacccaacagaccta
cagaggctggctaaggcccggaagctcagagagctgctgagacaggagatgaacaaggag
aagaaacggagcaaagccaaggtgtgtgtgagcgaatacacactagatccctctaaaatg
accatgagagatctcatctactacctgcctgataccaaccccatgacgtcttatctggta
gaggaacagagggagaatgagactgtcctcccactcaccccaccaagagaagagtcacct
gaaagacccccaacaccggaggtcccagctgagatagccagccagggagatgaagatgaa
gatgaggatgacgatggggtgatggtcccgcgggtgaaggtggcagaagacggctctctg
atcatcgatgaggagagtttgacggtagaggtcttgaggcagaaagggcccaacccagct
gatgatagagaccccatctttgagcgtggctccacaaccacctactcgagcttcaggaag
gggacacacgtcaagccctggtccaacaaagagacggacatgttcttcctggccatcagt
atggtgggaacagacttctccatgattggacagctgttccctcaccgcggtcgcaccgag
atcaagaacaagttcaagaaagaggagagagcaaacagctggaggatagacaaggccttc
aaggagaaacgcaggctggaccatgagttcttcactagtctcctggagaagatcttggct
gcagaggcaaagaggaacaaaaataagtcccccacagagaagatacgcatcaagaaaaaa
atcagacagaaagaaaagaatgcagcgaagcagctgagcgacgtggaggaggaggggtta
gacgcggagatggacacagaggaggtggagggagagaaggagaacgagaacgtctctaac
gaagggaccacgctttcttccgctcccacgcctaagagaaaacgcaaaagtagggatggt
ggaggagagtcctctcctgaagaagcaaaggatggaaagaaaaagaagattgacctaata
acaagcgatcaagaagaggctggcctacctgaagattctgaggcagggcctccagagagt
tcaaagcaggcagaagggcctgtggaagcagccaagggacctgtggtgatcaaaccagct
cagttgtcccgtggccgatcccagagacctcttcctaacctgggtaggaagtggggccag
aggggccccgagcccaataccaagcctaacgttaaagatggggccacacctacagaggag
gagaacactgaagaagggctgtctgaagaacaggtagataaagatgcttccccttcagtc
agtcaaaaggaggagaagaaagctggtaaactctcttcatctgagggagaggaggaagaa
gccagcgataaacccatcaaacccaccaggtacggcagattacccaaaaagacacagctc
ttgaattaccctgcaaaggaggatggggactcgccctcagactctgcccccactcccgcc
tcagacggatccccctccaccatgccaaaatccaaaccagctaccaggagggccaaaatc
aaacctggcccagccctgccaggtaggatgggccaatcagactctgcccccactcccgcc
tcagacggatccccctccaccatgcccaaatccaaaccagctaccaggagggccaaaatc
aaacctggcccagccctgccaggtaggatgggccaatcaacggctaggaaatccaagctg
gtcaccctcagggcgtcccagtctgaagatgaggatgaagatgaggaagaaggagcatgg
agagaggaggcgcaggccgaggaggacacccacaatcccacaagcccagagaaggagaat
caggcacctgcgttcatccccatgagccttcgctcgccacaacctgtcgccacagaggtt
gaggagaccatggaggaggtgaaagggctcgatatctccgtcaacatgcctgatgtcctg
ggtatttcccatgatgcattctgccctgactcgtcatgcgagcgggcacagggtgctgac
atgggcacagtgccctgtgaacatcagttggacctgttagtagatgtgatagacttcctg
tctccagataacatggaagtatctgaggagagctacaacgaggcagctagaacccttctg
gccatcggcaacctcacccacctgtctcaggcggctgaggccttcactgccggagcagat
gatatcatcacagaagaacgttccaatgaggaccaactgtaccagatgacaccacagccc
actgaccaattacaaactagcaccattccttctgaatctcttagggtcactgaggcatca
caaatcgctgatgattctgtacctgttgcctcgtcaacaacagcctctgtccctgtcacc
acgacaacagcttctatcccaggctccaaaataacagcctctgtcataattaccatggca
acagcctcagttccagtcaccacgacaacatcctctcctccagtcaacttgacaacaacg
gcctctatccgagtcaccacatcaacggcatctgtcccagtgcctcagagcagtgatacg
cccactctagaaactccacccatagaggaggggcctctcagacagatggaggggactgat
attggacacgcctccaagatggaatcaggttctgaagtgtcagagggctcagagcaacag
acaacctcacagaccaggaggagccacttccctaaggtcaaacccaacctgggacgggct
gccaggaccacacaacccaaacagacgaccactacactgtcagaaccaccacagactacc
accacactgtcagaaccaccacagactaccaccacactgtcagaaccaccacagactacc
accacactctctgaaccaccacttgagcctatgctgaatatcaccacaaccccagaacca
cagcctaccatgcatattaccatagaaccaccactgccttctgagagtattaacacagag
tcagaaacacagcccaaacagagaactaccacacactcaaaatcacaacccaccaccaca
cactccatgcaccagcccaccacaaatattatcccacactcagaaccaccgcccattaag
aaaaccagaatagcgtattcaaaaccacagcctacattgaataccaccacaaacacactc
tcaaaacaacaatccacacagagtaccaccatactctcacaaccacagcccacttcaagc
cttgagcagccaggtccagttacactcagacccatagtcccagagtcacctctgaggtca
tcaggagaggtgaaaggtcacgatgggcgtaagggaaatacttcctcttccctcagtgct
ggagggtcccagtcagggacatcagactcagaccagcccaaacagacaggacctgtaacc
cgtagggcccgtttacctaaacccaaacccaacttgggtctcaccgccaaagccgctacg
cgctctgcagtccaattaccagaaagcaggccaagccctgaagtccagacaccagaggaa
gctgatgaggttcccatggaaatacaacagatccaccaagtcgtccccctttctgacatc
atcgataccacccaggaggaaatacaacagattcatcaagtcatccctcatccacccata
gaggaggggcctctcagacagagggaggggactgatattggacacgcctctcaggtggaa
tcaggttctgaagtgtcagagggctcagagcaacagacaacctcacagaccaggaggagc
cacttccctaaggtcaaacccaacctgggacgggctgccaggaccacacaacccaaacag
acgaccactacactgtcagaaccaccactagattctatgctgaatatcatcacaacctca
gaaccacagcctaccatgcatatcaccatagaaccaccactgccttctgagagtattaac
acagagtcagaaacacagcccaaacagagaactaccacacactcaaaatcacaacccacc
acaaatatcatcccacactcaggaccacagcccattcagagaaccagagtagcgcattca
aaaccacagcctgcattgaataccaccacacaatcagaaccaccccagcccacactaaat
tcccccacaaacacactctcaaaacaacaatccacacagagtaccaccatactctcacaa
ccacagcccacctcaagccttgagcagccaggtccagttacactcagacccatagtccca
gagtcacctctgaggtcatcaggagaggtgaaaggtcacgatggctcaaaggaaaatagt
tcatcttccctcagtgctggagggtcccagtcagggacatcagactcagaccagcccaaa
cagacaggtcccccaacccgcagggcccgtttacctaaacccaaacccaacttgggtctc
accgccaaagccactacacgctctgcagtccaggtaccagaacgcaggccaaggcctgaa
gtccagacaccagaggaagctgatgaggttcccatggaaatacaacagatccaccaagtc
tcccccctttgtgacatcatcgatactacccaggaggaaatacaacagattcaccaagtc
atccctcatccaaccatagaggaggggcctctcagacagagggaggggactgatattgga
cacgcctctcaggtggaatcaggttctgaagtgtcagagggctcagagcaacagacaacc
tcacagaccaggaggagccacttccctaaggtcaaacccaacctgggacgggctgccagg
accacacaacccaaacagacgaccactacactgtcagaaccaccacagactaccaccaca
ctgtcagaaccaccacagactaccaccacactctcagaaccacagcccattcagagaacc
agagtagcgcattcaaaaccacagcctgcattgaataccaccacacaatcagaaccaccc
cagcccacactaaattcccccacaaacacactctcaaaacaacaatccacacagagtacc
accatactctcacaaccacagcccacctcaagccttgagcagccaggtccagttacactc
agacccatagtcccagagtcacctctgaggtcatcaggagaggtgaaaggtcacgatggc
cgtaagggaaatacttcctcttccctcagtgctggagggtcccagtcagggacatcaaac
tcagacgagcccaaactgacaggtcccccaacccgcagggctcgtttacctaaacccaaa
cccaacttgggtctcaccgccaaagccgctacgcactctgcagtccaggtaccagaaagc
aggccaaggcctgaagtccagacaccagaggaagctgatgaggttcccatggaaatacaa
cagatccaccaagtcttccccctttgtgacatcattgatactacccaggaggaaatacaa
cagattcaccaagtcatccctcatccaaccatagaggaggggcctctcagacagagggag
gggactgatattggacacgcctctcaggtggaatcaggttctgaagtgtcagagggctca
gagcaacagacaacctcacagaccaggaggagccacttccctaaggtcaaacccaacctg
ggacgggctgccaggaccacacaacccaaacagacgaccaccacactgtcagaaccacca
cagactaccaccacactctcagaaccacagcccattcagagaaccagagtagcgcattca
aaaccacagcctgcattgaataccaccacacagtcagaaccaccccagcccacactaaat
tcccccacaaacacactctcaaaacaacaatccacacagagtaccaccatactctcacaa
ccacagcccacctcaagccttgagcagccaggtccagttacactcagacccatagtccca
gagtcacctctgaggtcatcaggagaggtggaaggtcacgatggctcaaaggaaaatagt
tcatcttccctcagtgctggagggtcccagtcagggacatcagactcagaccagcccaaa
cagacaggccccccaaccaggagggcccgtttacctaaacccaaacccaacttgggtctc
accgccaaagccgctacgcgctctgcagtccaattaccagaaagcaggccaagccctgaa
gtccagacaccagaggaagctgatgaggttcccatggaaatacaacagatccaccaagtc
tcccccctttgtgacatcatcgatacgacccaggaggaaatggaacagattcaccaagtc
atccctcttactgatgtcattgattctacccagggcgatatctctctctttacggaggga
agctttttctcgcaacaaagtgatgctgtcttcatacagcactcagaaacgtctgtgtcg
actgctccgttggaccaggcccagtcagacccggatgagcctatattcatcctctccctg
actgaaatcccagtgctccccgcaggggaggagaatggctgcacatcccagaccctctct
gagcctttcttttttctaccagacgcaggcgctcaactgcagcagagcagtgatattgtt
gcccccggaggtagtttggagaaagggaatgctggtgtcctctgtgaagtccctgagcct
atgtcagtggatgaggtccttcctcaaccctcatacaccagtatcaaggaagtggagtct
ggctccacggcgggtccagtaggtgtgtgtgcctcggccaaaccctcagaagactccatg
gctgatgcagagactagtgaggacacgcatcctccttctaagaagaggaaagcgccagag
agagccaggagagacaaactgcaggtgagacctaacactgcagtaagggaacagaccagt
tgttcggcccctgccaaggaggctgtgtcacccattaccccagaccagacaccctctttg
accactaccaccctagacacttaccacctccctgcctccagtcccctggcccagccaggc
ccctccgtcacgggaactgcatcacagcaggggactgtgggctgtttcgatcatacagag
accgagcacacgccgactggaggggaggacaatagttcaggggcggagtctcaggctgcc
cgtcaaattacaccgctggctatgagtggccccttgagcaggcctggtaggagacccaga
ggattcctgtctttcatgtccaataagaacgcctcccctgtagctgcccccccccgaggt
accagagcagccgctcggaggccccaggtcaacaccacccgcccaggggggaaacgggct
gctcctgcaccttccaccacaaccagaaccatgccttcacctcccataatgcattacacc
accacccccactagggccaccagaaccaccactaagccagatttttccgccagggtgact
caggaaaaaccctctgatgccctggccttacactcagacccagagcccagtacttccctg
tgtactacagctactgagtcctctcaggtgccagccgcccagtccagtgcgtctccctgt
gtggacagcggttcagcagacgaggaacccatcaacgtgtcccagtacttcttcagtgac
atcttcaccgaggtcgaggagaatgagggatga
DBGET
integrated database retrieval system
