Oncorhynchus tshawytscha (Chinook salmon): 112219723
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Entry
112219723 CDS
T05605
Name
(RefSeq) PH and SEC7 domain-containing protein 4 isoform X1
KO
K12494
PH and SEC7 domain-containing protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112219723
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112219723
Membrane trafficking [BR:
otw04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
112219723
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
PH_9
PH
Motif
Other DBs
NCBI-GeneID:
112219723
NCBI-ProteinID:
XP_042158285
UniProt:
A0AAZ3PVE4
LinkDB
All DBs
Position
LG20:complement(22305653..22321768)
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AA seq
1088 aa
AA seq
DB search
MEEAMVCSPLPDLKQLNSQTCTSLELLPPSRPLEEAIRWGEMEKQVSEADREKEDNSPQT
GRISEEPEEHWDSMTLPVYPMTCPSVLLSFATVQWDMPDLSPDTPFPMTDNSLADELDSS
GAASLDWTLNPLSLHHHHQQQQHQSCVTMINIELSVQEKTEKHNRPEQQLPLDSENSHPL
LLQFQACDTPSPDVEASAQQLFEEHDSLSESSPRQETEKEMGQPVTEDTIPPSDRAPSPV
QTGESETGQDSESLDSVLGEEQEQTSRVLTIPINSEQGSSSANYEEKEQDVTNLVYNGDC
DEQTEQTEQSEGREQSDREGESETIELLEHLFEPAELKEQSELTEKSEHSWQSEPNHTKQ
SEYKDNTETTEQPEESEQLVESDQVEHSNQLGEEEQQTEETRLQQAEQSDKIDQSESEQT
ECLESKQLQQTQHSQQTVHSEQTEFSVQTEPQTETSQEMEHSEDSEQSKQSGETEQTEQS
TDSDQSKQSGETEQSEQTEQLDQTDNKPVHSKQLDLYFHCTEELEQSDHTEEQKQSEIEQ
PAQTELTELTEEGAQTEHSKQVEELEPKEYKEDSCLPPREGSLEQLESQVQQTEASEPVV
VHMNGGVLDREKACRLAERLYRLDGIHKTDVVKHLDKDNGFSQAVGQEYLKFFDFTGQSL
DQGLRSFLRVVVLIGETQERERVLQHFSCRFQQCNPHTFSSSGEVLTLTCAVMLLNSDLH
GQNVGKAMSVSSFVSNLDGMNEGENFSKELLKALYNTIKNEPLEWAVDEKELKSSMLLVE
DAKEDAPLRSKSNPFQDVPHDKKATVFKQGFLKRKAHADIDGKRTPWGKRSWKTFFGVLK
GMVLYLQKDEYKMEWLSTEEVVSVHHALAEQAADYTKRPHVFRLQTADWRVFLFQASSTA
EMSSWISRINLVSALHSSPPFPAAVGSQRRFCRPILPASQSAHTLERQLQSHARMLLSFQ
EDLAYLQQSLPESRRAKAKELEEHRVREEYLQHEKCRYKAYIQMLEVWKGLNQSVDTEVG
TSELSLFDRAVCKDTVDEEGEEGTLKKSHSSPSLDVEMALPHVVKVKRNISERRTYRKIV
IPRRNRDI
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggctatggtgtgctctcctctcccagacctcaagcagctaaacagccagaca
tgcacctccttggagctcctaccaccgagcaggcccctggaggaggctattcggtgggga
gagatggagaagcaggtgagtgaggccgacagggagaaagaggacaactctcctcaaact
ggaaggatctctgaggagccagaggagcactgggactccatgactttacccgtgtacccc
atgacctgtcccagtgtccttctgtcctttgccacagtgcagtgggacatgcctgacctt
tcccctgacacacccttccccatgactgacaatagcttggccgatgagctggattccagt
ggagcagccagtctggactggactctgaacccgctgtcccttcaccaccaccaccaacag
cagcagcatcaatcctgtgtgacaatgataaacatagagctgtctgtccaggagaagaca
gagaagcacaatagaccggaacagcagttgcctctggacagtgaaaactcccatccgctg
ctgttgcaattccaggcatgtgacacaccgagcccagatgttgaggcttcagcacaacag
ctatttgaggaacatgactctctttcagaaagctctccgcggcaggagacagagaaagag
atgggacagcctgtgacagaagatactatcccaccctctgacagagctcctagccctgta
cagacaggagagtcagagactgggcaggatagtgagagtctagactctgtactgggagag
gaacaggaacagactagcagagtgctaacaataccgatcaattcagagcaaggatcaagt
tctgcgaactatgaggagaaggaacaggatgtaactaatttagtttataatggagattgt
gacgagcagacagaacagaccgagcagtcagaggggagggaacagtcagatagggagggg
gaatccgagactatagaactcttagagcacctgtttgagccagctgaactgaaagaacag
tcagaactcacagagaagtctgaacacagttggcagtcagagcctaaccacacaaaacag
agtgaatacaaagacaacaccgagacaacagagcagccagaagagtctgagcaacttgta
gagtccgaccaggtagagcattcaaatcagttaggtgaggaagaacagcaaactgaagag
acccgtttacaacaggcagaacagtcagacaagatagaccagtcagagtcagagcagaca
gaatgtttagaatcaaaacaattgcaacagacacaacattctcaacaaacagtgcactca
gagcagacagaattttcagtgcagacggaaccacagacagaaacatcacaggagatggaa
cactcagaagattctgagcagtcaaaacaatcaggggagacagaacagacggaacagtca
acagattctgaccagtcaaaacaatcaggggagacggaacagtcagagcagacggaacag
ttagatcagacagataacaaaccagtacattcaaagcagttagatctatatttccattgc
acagaggaacttgaacagtcagaccatacagaagaacagaaacagtcagagattgaacag
ccagcgcagactgaactgactgagttgacagaagagggtgcacagacagagcattccaag
caggtagaagaattggaaccaaaagagtataaagaggattcatgtttgccgcccagggaa
ggaagtttagagcaactggagtctcaggtacagcaaacagaggcctcagaaccagtggtg
gtccatatgaatgggggagttttggacagggagaaggcctgcaggctggctgaaagactc
tacaggctggatgggatccacaagacagatgtggtcaaacacctagacaaagacaatggc
tttagccaagctgttgggcaggagtacctcaagttctttgacttcaccggtcagagtcta
gaccaaggcctgaggtctttcctgagggtggtggtgctgatcggtgagacccaggagaga
gagcgagtactgcagcatttctcctgccgcttccagcagtgcaaccctcacaccttctcc
tcttcaggagaagtactcacactcacctgtgctgtgatgcttctgaactctgatctgcat
ggacaaaatgtgggtaaagccatgtctgtgtccagctttgtgtccaacctggatgggatg
aatgagggtgagaacttcagcaaggagctgttaaaggctctctacaacaccattaagaat
gagcctctggaatgggcagttgatgagaaggaactgaagagctccatgctgttggtggag
gatgctaaagaggacgcacccttgcgctccaagagcaacccgttccaagatgtgcctcat
gacaagaaggccacagtgttcaaacagggctttctcaaacgcaaggcccacgctgacatc
gatggcaaacgcactccttgggggaagagaagctggaagaccttctttggagtgctgaag
ggaatggtcctctacttacagaaggatgagtataagatggagtggctgagtacagaggag
gtggtcagtgtgcaccatgccctggcagagcaggcagcagactacactaagagaccacat
gtcttccgtctgcagactgccgactggagggtcttcctcttccaggcctcctccacagca
gagatgagttcatggatcagccgtattaacctggtgtcagccctgcactcttctcctccc
ttccctgctgccgtgggctctcagaggaggttctgcagacccatcctgcctgcctcccag
tctgctcatacactggagagacagctgcagtcccatgctcgcatgctgctgtccttccag
gaggacctggcctacctgcagcagagtctccctgagagccgcagggccaaggccaaggag
ctggaggaacaccgtgtcagagaggagtacctgcagcatgagaaatgtcgctacaaggcc
tacatccagatgctggaggtctggaagggtttgaatcagtcagtcgacactgaggtggga
accagcgagctcagcctgtttgacagagctgtgtgtaaggacacagtggatgaagaggga
gaggagggaaccctgaagaagtcccactccagcccctctctggatgtggagatggccttg
ccccacgtggtcaaagtcaaacgcaacatctcggaaagacggacctatcgcaagatcgtc
atacctcgacgcaaccgggacatatga
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