Oncorhynchus tshawytscha (Chinook salmon): 112219765
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Entry
112219765 CDS
T05605
Name
(RefSeq) BDNF/NT-3 growth factors receptor-like
KO
K04360
neurotrophic tyrosine kinase receptor type 2 [EC:
2.7.10.1
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04010
MAPK signaling pathway
otw04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112219765
04020 Calcium signaling pathway
112219765
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
otw01001
]
112219765
Enzymes [BR:
otw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
112219765
Protein kinases [BR:
otw01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
112219765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
Ig_3
LRR_8
Ig_2
C2-set_2
ig
LRR_5
LRRCT_2
LRR_4
Haspin_kinase
LRR_9
Motif
Other DBs
NCBI-GeneID:
112219765
NCBI-ProteinID:
XP_024237050
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All DBs
Position
LG20:7438518..7464782
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AA seq
792 aa
AA seq
DB search
MDSNVREYGMARLGIFMVLMGLWRVSAACPAFCTCSISRIACIDPEPGIEDFPILTLDDI
EMDINITDIYIANQNRLFDINDNSLKYYSNLRNLTVTNTRLTSISSQAFFNNTRLQYLNL
RDNNLSTLSWKTFQNLNMTSFPLLSGNPLKCVCENMWIKLRLQEDTDSTESQELKCIDDR
AVRRAISRFTPPDCEAPAVEVSPSIIKMTEGSDVRAVCSATGSPAPDILWNIDSLFTITK
INALELESNLTLLGLSPSDNGRVITCNVENVVGQTEAYLQLNILFRPTILELLEPLRLHH
WCIPFSVTGNPKPELRWYHKDQELHEQEYIKTEIHESTGSVHHGCLKLVNPTHIHNGQYT
LVVRNEYGEDRKEIDAHFLLPPDPDYDTDLPLPPIEDSVAVYIVVGIAGVALIGCVLMVI
ILKYGRNSKFGMKGSSSVISNDDDSASPLHHVSNGNNTPSSSEMGHDAVIIGMTKIPVIE
NPQYFRQSGSMLKSDTFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLIPDQDKILVAVK
TLKEASESGRADFHREAELLTNLQHEHIVTFYGVCVESDPLIMVFEYMKHGDLNKFLRSH
GPDAVLMADGQHSLMVELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLV
KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRRFTTESDVWSLGVVLWEIFTYG
KQPWYQLSNNEVIECITQGRVLQRPRSCPKEVYDLMLGCWQRESYMRLNIKEIHSLLQSL
AKASPVYLDILG
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggactccaacgtacgggaatatggaatggctcgcttgggaatctttatggttttgatg
ggactgtggcgggttagcgctgcttgccctgcgttctgcacttgcagcatctcaaggatt
gcttgtatcgatcctgaaccagggatcgaggatttccctatccttacgttagatgacata
gaaatggacatcaacatcaccgatatatacattgcaaatcaaaacagactatttgacatc
aatgataacagcttgaagtactactcaaatctcagaaatctaactgtgacaaataccaga
ttgacttctatctcatcacaggcctttttcaacaatacaagacttcaatatctgaatctg
agagacaataacttgtcaacactctcttggaaaacattccaaaacttaaacatgacatct
tttcctctcctgtctggtaaccctctgaagtgtgtatgtgagaacatgtggatcaaactg
aggctgcaagaggacactgacagtacagagagtcaagagctgaaatgcatagatgacaga
gcagtgaggagggccatctccagattcactccccctgattgtgaggctcccgcagtggag
gtcagtccctctatcatcaaaatgacggagggaagtgatgtcagagcagtgtgcagtgca
acagggtctcctgcccctgatatcttgtggaatattgacagtttgtttaccatcactaag
atcaatgccttggagctggagagcaatctgacactgttaggtctctcgccttcggacaac
ggcagagtgatcacttgcaatgttgagaacgtagtcggccaaaccgaggcttacctccaa
ctcaacatcctctttcgccccactatcctggagctgctggagccattgcgcctccaccac
tggtgtatccccttcagtgtgaccggaaaccccaagcccgagctacggtggtaccacaag
gaccaagagctccacgaacaggagtacatcaagaccgagatccacgagagcacagggagc
gttcaccacggctgcctgaagcttgtcaacccgactcacatccacaacgggcagtatacg
ctggtggtcaggaacgagtacggggaggatcgtaaagaaatcgacgcccacttcctgctc
ccgccagacccagactacgatacagacttaccactacccccaatagaggacagtgttgca
gtgtacatagtggtggggatcgctggcgtggcattaattggatgtgtcctgatggtgatc
attctgaaatacggaagaaactcaaagtttgggatgaagggctcctcctcggtcatcagt
aacgacgatgactccgccagtcctcttcatcacgtctccaatggcaacaacaccccgtcg
tcctcagagatgggccacgatgcggtgatcattggaatgacaaagatccctgtcatcgag
aacccacagtatttccgccaatctggcagcatgctgaaatcggacacgtttgtccagcac
atcaagagacacaacattgtgctgaagcgtgagctaggagagggggcctttgggaaggtg
ttcctggctgagtgctacaacctgatcccagatcaggacaagatcctggtggctgtcaag
acgttgaaagaggccagcgagagcggccgagccgacttccaccgggaagcggagctactg
accaacctgcagcatgagcacatcgttaccttctatggcgtgtgtgtggagagtgacccg
ctcatcatggtgttcgagtacatgaagcacggcgacctcaacaagttcctcaggtcccat
ggtcctgacgcagtgctgatggctgatgggcagcacagcctgatggtggagctgacccag
tcccagatgctgcatatcgcccagcagatcgctgcaggcatggtctacctggcctcccag
cactttgtccacagagacctggccacacgcaactgtctggtgggagagaacctgctggtc
aagattggggactttggcatgtccagggatgtgtacagtaccgactactacagagtgggg
ggtcacaccatgctgcccatccgctggatgcctccagagagcatcatgtatcggaggttc
accacggagagtgatgtctggagtctcggcgtggtcctctgggagatcttcacctatggg
aagcagccctggtaccagctctccaacaatgaggtgatcgagtgtatcacccaggggcgc
gtgctgcagcggccgcgttcctgtccaaaggaggtgtacgacctgatgctgggatgctgg
cagagagaatcctacatgagactgaacatcaaggagatccacagcctgctccagagcctg
gccaaggcctcgcctgtctacctggatatactgggctga
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