Oncorhynchus tshawytscha (Chinook salmon): 112219831
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Entry
112219831 CDS
T05605
Symbol
top1l
Name
(RefSeq) DNA topoisomerase 1 isoform X1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
otw03032
]
112219831 (top1l)
Enzymes [BR:
otw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
112219831 (top1l)
DNA replication proteins [BR:
otw03032
]
Eukaryotic type
DNA Topoisomerases
112219831 (top1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
112219831
NCBI-ProteinID:
XP_024237105
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All DBs
Position
LG02:complement(20523146..20535330)
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AA seq
754 aa
AA seq
DB search
MAVIWRGNTQDRLHQDTISSGGGNSHKHKDKYKDKEHKHKDHKKDRERDKSKYGNSDHKE
FSEKKHREKDRIKHEDVSTDRHKDKHKEKDHRKDEIKPKKEKENGFASPHRIKTEPDNDH
FYHSPKSLKRQRDNDETEFKPKKIKIENDRVDKKTKKRKQDEDIKPKKTQKNKKGEVADG
KKKAKKEPEEKWKWWEEERATDGSKWRFLEHKGPVMAAPYEPLPSKVRFFYDGKQMKLGP
EAEEVATFFAKMLDHEYTTKDAFRKNFFKDWRKEMTSEEKSKITDLKKCNFNEMGEYFKA
QSEARKAMTKDDKLKIKVENERLLQEYGFCIMDNHKERIANFRIEPPGLFRGRGDHPKMG
MLKRRIRPEDIIINCSKDSKHPKPPPGTKWKELRHDNKVTWLVSWTENIQGSIKYIMLNP
SSRIKGEKDWQKYETARNLKKCVDRLRNQYREDWKSKEMRIRQRAVALYFIDKLALRAGN
EKEEGESADTVGCCSLRVEHINLYPEKDGQEFVVEFDFLGKDSIRYYNKVPVEKRVFKNL
QLFMENKQPEDDLFDRLNTSILNKHLQELMDGLTAKVFRTYNASITLQQQLKELTSPDEN
LPAKILSYNRANRAVAILCNHQRAPPKTFEKSMQNLQTKIDAKKDQLSDAKRDVKSAKAD
LKVRRDEKSKKAVETKKKAVERLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRISVA
WCKKWGIPIEKIYNKTQREKFAWAIDMAEDDYEF
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgatatggaggggaaacacgcaggaccgtttgcatcaagacacgatttccagc
ggcggaggaaattctcataagcataaagataagtacaaggataaagaacacaaacacaag
gaccacaagaaggacagggagcgtgataaatcaaaatatggcaacagtgaccataaggag
ttctcggaaaagaaacatagagaaaaggaccgaataaagcacgaagatgtcagcacagac
agacacaaggacaaacacaaggaaaaagaccaccggaaggatgagatcaagccgaagaag
gaaaaagagaatggctttgccagccctcatcgcattaagacggagccggacaatgatcac
ttctaccactctcccaagtccctgaaaagacagcgtgacaatgacgaaactgaattcaag
cccaaaaaaattaaaattgaaaatgacagagtggacaagaaaacaaagaagaggaaacaa
gatgaggacatcaagcccaaaaagacacaaaaaaacaagaaaggggaagttgctgacggg
aaaaagaaagcaaagaaggagcctgaggagaagtggaaatggtgggaagaggagagggca
actgacggttccaaatggaggtttctggaacataaaggcccagtcatggcagcaccgtac
gaacctcttcccagcaaagtccgatttttctatgatgggaagcagatgaagctcggccca
gaggctgaggaggtggccaccttctttgccaaaatgctggaccatgagtacactaccaag
gatgccttccggaaaaacttcttcaaagactggagaaaggaaatgacctcggaggagaag
tctaagattacagacctgaagaagtgtaacttcaatgaaatgggggaatacttcaaggct
cagtctgaggccagaaaggccatgactaaagatgataaactgaaaatcaaagtggagaac
gaacgcctcctacaggagtatggcttctgcatcatggacaaccacaaggagcgcattgct
aactttcgcattgagcccccgggcctgttccgtggccgaggagaccaccccaagatgggc
atgctgaaacgccgcatccgccctgaggacatcatcataaactgcagcaaggactccaag
caccccaagcctccccctggtaccaaatggaaggagttgcgtcatgacaacaaggtgacc
tggctggtgtcgtggacagagaacatccaaggctctatcaagtatatcatgctgaatccc
agttcaagaatcaagggagagaaggactggcagaagtatgagacagcccgaaatctgaag
aagtgtgtggatcggttaaggaaccagtaccgcgaggactggaagtccaaagagatgagg
atccgacagagagccgtggcactctacttcatcgataagctggctctgagagcaggtaat
gagaaggaggaaggggagtctgcggacacagtgggctgctgctccctccgagtggaacac
atcaacctgtaccccgagaaggacggccaggagtttgtggtggagtttgacttcctgggt
aaagactccatccgctactacaacaaagtccctgtggagaagagggtattcaagaacctg
cagctgttcatggaaaacaagcagccagaggatgacctctttgaccggctcaatacctcc
attctgaacaagcaccttcaggagctgatggacgggctgacggccaaagtgtttcgtacc
tacaacgcctccatcactctgcagcagcagctgaaggagctcaccagcccggatgagaac
cttccagccaagatcctgtcatacaacagggccaacagagctgtggccatcctgtgtaac
catcagagggcaccgcccaagacctttgagaagtccatgcagaacctccagactaaaatt
gacgcaaagaaggaccagctatctgacgcaaagagggatgtgaagagcgccaaggctgac
ctcaaagtacggagagacgagaagtccaaaaaagctgtggagaccaagaagaaggctgtg
gagaggctagaagagcagctgatgaagctagaggtgcaggcaacggaccgcgaggagaac
aagcagattgctctgggcacctccaaactcaactacttggatccacgcatctctgtggcc
tggtgcaagaagtggggtatccctatcgagaagatatacaacaaaactcagcgtgaaaag
tttgcctgggctatcgacatggcagaggatgactatgaattttaa
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