Oncorhynchus tshawytscha (Chinook salmon): 112219900
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Entry
112219900 CDS
T05605
Symbol
si:dkey-34e4.1
Name
(RefSeq) carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein isoform X1
KO
K16513
carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112219900 (si:dkey-34e4.1)
Membrane trafficking [BR:
otw04131
]
Endocytosis
Clathrin-mediated endocytosis
LDLR adaptor proteins
112219900 (si:dkey-34e4.1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PID
DUF4628
FF
DivIC
Motif
Other DBs
NCBI-GeneID:
112219900
NCBI-ProteinID:
XP_042158492
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All DBs
Position
LG20:35360464..35555181
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AA seq
678 aa
AA seq
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MPGRNRYNLVDDVADSRVPLHNEEAYQHGIHFQAKYVGSLDVPRPNSRMEIVAAMRRIRY
EFKAKNIKKKKVSIIVSVDGVKVVLRKKQKRKEWTWDESKMLIMSDPIYRIFYVSHDSQD
LKIFSYIARDGSNNSFRCNVFKSKKKTQAMRIVRTVGQAFEVCHKLSLQHAHQGIDGQAD
GESDKSTEDSPAEGHQLTGVEEEEEEEEGFGEEGEPQAQSQSVCEQAVNEILQSLAQLNV
IQPGHTIMDYESRSSYMVSPNGVVSPSSPCSPLLTPLAAHHYLQLLQQQIQQQQQHTQVA
VAQVQLLKDQMSVETAARVEAQARVHQLLLQNRDLLQHLSLLVTQLKHLESKAPGPGEKH
TAGLGPGERQGHNDQESSWTTRSLSLNLKNHYSLSSMDQPITSTPAGPLQTPPLTASQVD
GAESYLNLLNLENGTKPLGSQNGGETETDTLIRRTSNGKPGRKDSSEVSSNEIVRFETRN
LTALDERFKQIIPKLDPPPPSFNRKRASRTVSPGLEFNPLTMPLTTQVDGNGGVPSRSES
LSFPDITPCSLSSGLSGDFHQLSNGGGESGSCGSASEDSGVRSETKSHLSPLHDEEDPFG
DRGAFLTASSGCGSPLEDMKGESAPLSCVTTTPGTHEDSYEHTLPFSSPINDTCLHISFS
EDELLDSSPEDSSVPQRS
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgcctggacggaacaggtacaatctggtggacgatgtcgcggattcgcgggtccccctc
cataacgaagaagcgtaccaacacgggatacattttcaagctaagtatgtgggcagtctg
gatgttcccaggcccaacagtcgtatggagatcgtagcagccatgaggaggatcaggtat
gagttcaaggccaagaacatcaagaagaaaaaagtgagcatcattgtgtctgtggacgga
gtcaaggtagtcctccggaagaaacagaagaggaaagagtggacctgggacgagagcaag
atgctgatcatgtctgaccccatatacaggattttctacgtgtcccatgactcccaggac
ctgaagatcttcagctacatcgccagagatggctccaacaactccttcaggtgtaacgtc
ttcaaatccaagaagaagacccaggccatgcgtatagtgcgtacggtgggccaggcgttt
gaggtgtgtcataagcttagtctgcagcacgcccatcagggtatagatggacaggcagac
ggagagagtgacaagtccacagaggacagccccgctgagggtcatcagttgacaggggtg
gaggaggaggaggaggaggaggaggggtttggagaggaaggggagccccaggcacagtcc
cagtctgtgtgtgagcaggcggtcaacgagatcctccagagtctggcccaacttaacgtg
atccagcctggacacaccatcatggactatgagagccgctccagctacatggtgtctccg
aatggcgtggtttctcccagcagcccctgctctccgcttctgaccccgctggcggcgcat
cactacctccagctcctccaacagcagatccaacagcagcagcaacacacacaggtggcc
gtcgcacaggtgcagctcctgaaggatcagatgtcagtggagaccgcagctcgtgtagag
gctcaggctcgtgtccaccagctgctactacagaacagagacctgctccagcacctgtct
ctgctggtcacacagctcaaacacctggagagcaaggcaccgggaccgggggagaaacat
acagctggactgggaccgggggagagacagggtcacaatgatcaggagtcgtcatggacg
accaggtctctgtcactcaacctgaaaaaccattacagcttgagcagcatggaccagccc
atcacctccacccctgcagggccactccaaaccccccccctcaccgcttcccaggtggat
ggtgccgagtcctacctcaacctcctcaacctggagaatgggaccaaaccactgggctct
caaaacgggggggagacagagacagacacactcatcagaagaacatccaatgggaagcca
gggcggaaagacagctcggaagtgtcgtcaaatgagattgtgcggttcgaaacaaggaat
ttgacagccctggatgaaaggtttaaacagatcatccctaaattggacccgcctcccccg
tccttcaaccgtaagcgagccagccgaactgtctctccggggttggagttcaacccgctg
accatgcccctgaccacacaagtagacgggaatggtggcgttccgagccggagcgagagc
ctgtccttcccagacatcacgccctgctccctctcttccggactctcaggagacttccac
cagctcagcaacggaggcggcgaaagtggctcgtgcggctcagctagcgaggattccggc
gtccgctccgagactaaatcgcatctctcgcctctccacgacgaagaggacccgtttggg
gacaggggggcgttcctgactgcctctagcggctgtggcagccccctagaagacatgaag
ggggaatctgcgcccctgtcatgcgtcaccaccaccccaggcacacacgaggacagctac
gagcacacgctccccttctcctcccccatcaatgacacctgtctgcacatcagcttctca
gaggatgagttgctggacagcagccctgaggactccagtgtcccacaacggagctag
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