Oncorhynchus tshawytscha (Chinook salmon): 112219903
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Entry
112219903 CDS
T05605
Symbol
ddx4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4 isoform X1
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112219903 (ddx4)
Enzymes [BR:
otw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112219903 (ddx4)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Gene silencing
piRNA pathway
112219903 (ddx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25
CCDC154
Motif
Other DBs
NCBI-GeneID:
112219903
NCBI-ProteinID:
XP_042158612
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All DBs
Position
LG20:41273843..41286214
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AA seq
645 aa
AA seq
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MDNWDEVTTSNESGMSSWTSGGQSSSFGRPTVSSWNSGGGGFGGGRGRGSRGGGGDFKSF
SSGAGENGNEDKDSSWNSDGGFRGRGRGGGRGSRGGGIRNGDDGNDGGFGGSQGGRGGRG
GFRSGGGDGGGFGGGGYRGRDEEVFSKGSTMDGGGDGGNPGPPKVTYVPEALCEKESSIF
AHYESGINFDKYDDILVDVSGSNPPKAIMGFEEAALCESLNRNVSKSGYKKPTPVQKHGI
PIIAAGRDLMACAQTGSGKTAAFLLPILQQLMVDGVAASQFSEIQEPEVIIVAPTRELIN
QIYMEARKFAHGTCVRPVVVYGGISTGHTIREILKGCNVLCGTPGRLMDIIGRGKIGLSK
LRYLVLDEADRMLDMGFEPAMRKLVGSPGMPAKEHRQTLMFSATYPEDIQKLAADFLKKD
YLFLAVGVVGGACSDVEQVVVQVTKFSKRDQLLEVLKTTGSERTMVFVETKRQADFIATF
LCQEKVNTTSIHGDREQREREQALGDFRSGRCPVLVATSVAARGLDIKDVQHIVNFDLPN
NIDEYVHRIGRTGRCGNTGRAVCFFDPEADCNLARSLVKVLSGAQQEVPKWLEEAAFSAH
GTTGFNPGGRTFASTDSRKGGSFQRDGASHLAAALSSGADDDEWE
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggacaactgggatgaggttaccacaagtaatgaaagtggaatgagctcgtggaccagt
ggtggccaaagttccagttttgggagaccgactgtcagctcctggaacagtggaggtggt
ggcttcggtggcggcagaggccgagggtccaggggaggtggtggagacttcaagagtttc
tcttcaggagctggtgagaatgggaatgaagataaagacagctcatggaacagtgatgga
ggcttcaggggaagaggcagagggggtggcagaggatcaaggggaggaggcatccgaaat
ggggatgatggcaatgatggcgggtttggaggtagccagggaggcagaggtggcagggga
ggcttccggtcaggtggtggtgatggaggaggatttggcggaggaggttatcgtggacga
gatgaagaagttttctctaaaggctcaaccatggatggtggtggagatggtggcaatcca
ggtcccccaaaggtgacctatgtgcccgaagccctctgtgagaaggagtcgtctattttt
gctcattatgagtcgggcatcaactttgataagtacgatgacatcttggtcgatgtcagc
ggcagcaatccgccaaaggcaatcatgggttttgaagaggctgccctgtgtgaatctctg
aacaggaacgtcagtaagtctggctataagaagcccaccccagtacagaagcatggcatt
cccataatcgctgctggccgggacctcatggcctgtgcccagactggatctgggaaaacg
gctgcattcctactgcccatcctgcagcagctgatggtggacggcgtggcagctagtcag
ttcagcgagatccaggagccagaggttattatagtggccccaaccagggagctgatcaac
cagatctacatggaagccaggaagtttgcccatggaacttgtgtgcgtccagtggtggtt
tacggtggcataagcaccggtcacaccattcgcgagatactgaagggttgcaatgtgctc
tgtgggactccaggaagactgatggacattattggaagaggaaagattggcttgagcaag
ctgcgttacctggtgctggacgaggctgacaggatgctggacatgggctttgagcctgcg
atgcgcaagctggtggggtccccaggcatgccagctaaagagcaccgccagacccttatg
ttcagcgctacctaccccgaggacatccaaaaactggctgctgacttcctgaagaaggac
tatctgttccttgctgtgggcgtagtgggcggagcctgcagtgatgtggagcaggtcgtg
gttcaggtaaccaagttctccaaaagagaccaactactggaggtcctgaagactacaggg
tctgaacgcacaatggtctttgtggaaaccaagaggcaggctgactttatagcaacgttc
ctgtgtcaggagaaggttaatactactagtattcatggtgaccgtgagcagagggagcgt
gaacaggcgctcggcgacttccgctcaggaaggtgtcctgtcctggtggccacctctgtt
gctgcccgtggactggacatcaaggatgtccaacacatagtcaactttgacctccccaac
aacattgatgagtatgtccaccgcatcgggagaacaggtcgctgtgggaacaccgggaga
gctgtgtgtttctttgacccggaggccgactgcaacctggcacgatccctggtcaaagtc
ctgtctggggcccagcaggaggtgcccaaatggctggaggaagctgccttcagtgctcat
ggcaccacagggttcaacccaggtggcagaacctttgcctctactgatagcaggaagggt
ggctctttccagagagatggggcaagtcatctagctgctgccctgagcagtggcgcagac
gacgacgaatgggagtga
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