Oncorhynchus tshawytscha (Chinook salmon): 112219906
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Entry
112219906 CDS
T05605
Name
(RefSeq) lipoxygenase homology domain-containing protein 1-like
KO
K24822
lipoxygenase homology domain-containing protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112219906
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112219906
Cilium and associated proteins [BR:
otw03037
]
Other cilia and associated proteins
Stereociliary proteins
112219906
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Other domain-containing proteins
Others
112219906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLAT
DUF7755
Motif
Other DBs
NCBI-GeneID:
112219906
NCBI-ProteinID:
XP_042157972
LinkDB
All DBs
Position
LG20:complement(34673874..34720387)
Genome browser
AA seq
2442 aa
AA seq
DB search
MPSKEKKTAGTEETEEVDCDVEEKEPKPKGKSKSDASGDTKPDGAKKRKKHKSPEESDEE
PEKERKNKGERHDKVKEKKEKKKKKAEDDAEKREGDEVIENEEEGDDEQNNNDTIETKPK
KKKSEEEDMTEGDVKEEKKKKKKSSSEGDQQGEEEMGSKGRKSTDGGKKKKKAQDEEPLL
EDQEGEEEDSKKKKKKKPKKGSADSDEDKKDKKGKKGKKPKAKQVDYAEIYYNELMTYQT
DSSDGYEEEYHKKKVYEVVTVTGDVRGAGTDANVFVTLFGEFGITPKVHLASKSRTAFEK
NKTDVFRIKTHNVGPLKKLRIEHDNTGGLNASWFLDRVVVTDMNRPHLRFYFACNNWLSR
EEGDGLYVRDLLGSLNPMDVPKLNKYIVSVFTSAEKGSGTDADVFLNIFGEHGDTGERRL
DSDKDNFERGTEDKFTIESPNLGRLKKITIGHNNRGSSAGWCLDKVIIDDMGNKEVYEFP
VNRWFAMDEEDGKIQRDVLVGATQPMAVVYNVQVMTGNVRGGGTNSKIHIIMHGTKGLKN
SGKVFLEGGAFERGLIDIFNVEIAALLSPLSRVTIGHDNGAVGAGWYCEKVTVYCPFTGI
EQTFPCCKWLDEDEGDGLIERELYEMVSLRQKKLKKYPWSLWIWTSDVKGAGTDAQVFLQ
IYGEKGKSDEMRLESNSDSFEQAQLDKFMIEMPDIGKLTKARIWHEKRHPFAGWHFARAT
VMKTLTREKYSFNCGRWLDINEDDNEIIRELPATGALIPEPLLLLKYRITICTGKVSGGG
TDASVFLNVIGDLGDTGDRLMFLSKNNVNKFEKGNADEFLTEAVSLGQVRRVRIGHDGRG
GGCGWFLDKVLVREEGQPESAAIEFPCNRWLDRNEDDGQIVRELVPAGDGLRLHNVNYHI
SVKTGNINGASSDSKVFVKLYGEKGDTTRILLVVSDNDLSNYYETGQTDIFTVETYDIGQ
IHRLLIGHTNEGLRAGWFLDSVRIIVPVHGKQYQFPSHRWLCKDEADGKVEVEIYPSETL
DIEKLINYEVTVVTGNMRNGGTNANVFCQIYGEEGKTELISLKSRSNNFERGTTEIYKIE
ALNVGKLFKIRIGHDGSGVGDGWFLETVDIKRLTMAMVQREVVKEKPKDDKKDKKKNKKK
KKEEDEEEEYVTELQEVTESVTFPCHRWLARDEEDGEIVVELLPEDPGDLEENSYEVHVF
TGPMWGAGTDANVYINIYGEIGDTGERKLRKSNNLNKFEKGQEDVFSMQAIDLGILKKLR
IRHDNSQPHAAWFLDRVEIVDNKDDTTYYFPCKRWLAIDEDDGQIARELVPVDEAFMKKG
EDDDDDDDEENSSATLGLEQKAMSTTFTMRVKTGDKKYAGTDANLFAILYGMKDDTGIIM
LKASKLHKNKFEQAMIDEFTVEAVDIGTLKKIRIGHDNSGAASGWFLDWVEVDAPSLGQK
LRFPCGRWLDKGEDDGAIVRDLFPANLQTELYTPFVPYEIKTFTSDLFAAGTDADVFIVL
YGRDGVCTQQRSLCVNKRERTMYFERGAEDMFIVELEDVGDVIEKIRIGHDNRGLNGGWH
LDRVEIRRLLRKGKGSETIIFPCERWLAKSEDDGETVRELVPSDIITEKLLRDGTLKVSE
VEVEDALETHTYKVSVMTGDVYDAGTDANVFLTIYGDLGDTGERKLSKSETNGNKFERGA
VDKFTIEAVDLGQVFRMKIRHDNSMMSADWYLDQVEVVDEDTEEVFLFLCERWLSRKRED
RRIERMFYVKGYEGERETIQGSKKSSALIMKSVDSNVNKKKKKGEDVQKESTIIPYHFTI
STGEENDASTCSRVYVIIMGPNHTQTQRLWLDLPGGKKCFESGSLESFEAHGADVGEIKK
VELGHDGATPESCWLVDELAVAVPTKGVKYIFQCKCWLAKDRGDGLTARVFNVLDADSIT
ISQKIIYEVTVVTGDVQNAGTDTQIYVSVFGTNGTTEEVLLQKNEDRFERGQEDTFSLEV
DDIAPLRKMRVRVDGSGSRPDWFLAKIIMRNLTTEEVSVFTYEEWLSKTKGPKRTMICEM
AAVVDEEEMVEITTYIIQVKTSDIGGAGTDANVWIIVFGECGDTGTLALKECQKSNKFER
KQTDVFRFPDVLSLGELSKVRVWHDNSGPAPGWHIEYIDVKDEALDRTFRFPCDRWLAQN
EDDGQIMRELSCANNDILDLNEKTKYEIITTTADTDDAETKENVWIALEGKKGRSKEFMM
ENSSKKKRFLRGNKDKFEFSSKQLGDIAGICLGHTPKDGKKVKGEAFWHVKEVVVIEKVL
GNRFIFICNALIPLSPKRDEFVTIECTKAIESFASKARSLVPVKYEIILITGDEKGAGTD
ANVFITIYGSNGDSGRRSLRQKFRNLFERGQTDRFLLEMLDMGELLRVCVEHDNTRLSPG
WLLDRVEVTNTANGVTTIFLCGKWLNTKKADGQIFRVLYPKY
NT seq
7329 nt
NT seq
+upstream
nt +downstream
nt
atgccctcaaaagagaaaaaaactgcaggaacggaggaaactgaagaggtggattgcgac
gtggaggaaaaggagccaaaaccgaaagggaagagcaagtctgacgccagcggagacacc
aagccagacggagcgaagaagaggaagaaacacaagagcccagaggagtctgacgaggaa
ccagagaaagagaggaagaataaaggggaacgccacgataaggtgaaagagaaaaaagaa
aagaagaaaaagaaagcagaagatgatgcagagaagagggagggggatgaagtgattgaa
aatgaggaagagggagatgacgagcagaacaacaatgacaccatcgaaaccaaacccaag
aagaagaaatccgaagaagaggacatgactgagggagacgttaaggaggaaaagaagaag
aaaaagaagtcgtcttctgagggagaccaacagggagaggaggagatggggtccaaaggc
aggaagtccacagatggagggaagaagaagaagaaagctcaggatgaggagcccctcttg
gaagatcaggagggagaagaagaagactccaagaagaaaaagaagaagaagccgaagaag
ggatcggccgacagtgatgaggacaagaaagacaagaaagggaagaaagggaagaagccc
aaggccaagcaggtggattacgctgagatctactacaatgagctgatgacctaccaaacg
gactcctccgatggctatgaggaagagtaccacaaaaagaaagtgtatgaggtggtgact
gtcacaggtgatgtgagaggggcaggcacagacgccaatgtgtttgtcactctttttgga
gagtttggcatcactcccaaagtgcacctggccagcaaaagccgaacggcatttgagaaa
aataagacggacgtgttccggattaaaacacacaatgttgggcccttgaagaagctgagg
attgaacatgacaacacaggtggcttgaacgccagctggttcctggaccgggtcgtggtg
accgacatgaaccgtccacacctgcggttctacttcgcctgcaacaactggctgagccgt
gaggagggggatggcctgtatgtcagagacctgctgggcagcctcaaccccatggatgtc
cccaaactgaataagtacatagtgagtgtgttcacttctgctgagaagggcagcgggact
gatgctgacgtcttcctgaatatctttggagagcatggcgatacaggggagagacggctg
gacagtgacaaagataattttgagcgaggcacggaggacaagtttactattgaatcacca
aacctgggaaggctaaagaaaatcaccattggccataacaacaggggctcatcagctgga
tggtgtctggataaggtgatcattgatgacatggggaacaaggaggtgtatgagtttcca
gtgaatcgctggttcgccatggacgaagaagatggaaagatacagagagatgtgttggtg
ggagcaacacagcccatggcggtggtgtacaacgtccaggtgatgacgggcaacgtgaga
ggtggtggcaccaactctaagatccacatcatcatgcatggcaccaagggcctgaagaac
agtggcaaggtgttcctggagggtggagcatttgagcgggggctcatcgatatcttcaac
gtggagattgctgcactgctcagcccactcagcagggtcaccatcggacatgacaacgga
gctgttggggccggctggtactgcgaaaaggtgacagtgtactgcccattcacagggatt
gagcagacgtttccctgttgcaagtggctggatgaggacgagggggacggattgattgag
agggagctgtacgagatggtgtccctcaggcagaagaaacttaagaagtacccgtggtca
ctgtggatctggacatcggacgtgaagggggcagggacggacgcccaggtcttcctacag
atctacggtgagaagggcaagtcagatgagatgagactggagagcaactcagacagcttt
gagcaggctcagctggataagttcatgattgaaatgccagacattggaaaactgacgaag
gcccgtatctggcacgaaaagagacatcctttcgcaggctggcatttcgctagggccacg
gtgatgaagactctgacaagggagaaatactcgtttaactgtggccgctggctggacatc
aacgaggacgataatgagatcatcagagagctgcccgccaccggagctctcatcccagag
ccgttactactgctgaagtatcgcatcaccatctgtactgggaaagtgagtggaggtggc
actgatgccagcgtattccttaatgtgatcggggacctgggagacacaggggatcgactc
atgttcctcagcaaaaacaacgtcaacaagtttgaaaagggcaacgccgatgagtttctg
accgaggcggtgtcattggggcaggtgcgcagggtgcgtattggccatgatgggaggggt
ggaggctgtggttggttcctggataaggtgttggtcagggaggagggccaaccagagtct
gcggccatagagttcccctgtaacaggtggttggaccggaatgaggacgatggacagatc
gttcgtgagttagtgccagcaggagatggtctgcgtctccacaatgtcaactaccatatc
tcggtgaagacaggcaacatcaacggggccagctcggactccaaggtgtttgttaagttg
tacggagagaagggcgacaccacaaggatactcctggtggtctcggacaacgacctgagt
aactactatgagacgggccaaactgatatcttcaccgtcgagacctatgacatcggacaa
atccaccgtcttctgataggccacactaacgagggtctgcgtgctggttggttcctggac
agtgtccggatcattgttccggtccatgggaagcagtaccagttccccagccatcgctgg
ctgtgtaaggatgaggctgacggcaaggtggaggtggagatctatcccagcgagaccctg
gacatcgagaaactgattaactacgaggtcacagtggtcacggggaacatgcgcaatggc
ggcaccaacgccaatgtgttctgccagatctacggagaggagggcaagaccgagctcatc
agcctcaagagccgctccaacaactttgagcgcgggaccacagagatctataagatcgag
gcgctgaacgtgggcaaattattcaaaatccgcatcgggcacgatggttcgggcgtgggc
gatgggtggttccttgagacggtggacatcaagcggctcactatggccatggtacagagg
gaagtggtgaaggagaaaccaaaggatgacaagaaggacaagaagaagaataaaaagaag
aagaaagaagaggatgaggaggaggagtacgtgacggagctccaggaggtgacagagagc
gtgacgttcccctgtcatcgctggctggcccgcgacgaggaggacggggagatcgtggtg
gagctcctacccgaggaccccggagacctggaggagaactcctatgaggtccatgtgttt
actggccccatgtggggagccggaaccgatgccaacgtttacatcaacatctacggagag
atcggtgacacgggcgagcggaaactaagaaagtccaacaacctcaacaaatttgagaag
gggcaggaggacgtgttctccatgcaggccatcgatctgggcattctgaagaagctgagg
attcgtcacgacaacagccagcctcatgctgcctggttcctggacagggtggagatagta
gacaacaaagacgacaccacgtactacttcccatgtaaacggtggctggccatcgatgaa
gatgatggacagattgccagggagctggtccctgtggacgaagcctttatgaagaagggt
gaggatgatgatgatgatgatgacgaggaaaactccagtgcaacactcggcctggaacag
aaggccatgtccaccaccttcacaatgagggtaaagactggagacaagaagtatgcgggc
actgatgccaacctgttcgccatcctgtacggcatgaaggatgatacaggcatcataatg
ctgaaagcatccaagttacataagaataagtttgagcaggccatgatcgatgagtttaca
gtggaagctgtggatattggaacactgaagaaaatacgcatagggcatgacaactcaggg
gcagcatcaggctggttcctggactgggtagaggtggatgccccctccctgggccagaag
ctgaggttcccctgtggtcgctggctggataagggagaggacgacggggccatcgtcagg
gacctcttccctgcaaacctccagactgagctctacacaccatttgtgccctatgagatc
aagacgttcaccagtgacctgtttgcagcgggtacagacgcagatgtgttcatcgtgctc
tacggccgagacggggtgtgcacccagcagaggtctctctgtgtcaacaagagggagagg
accatgtactttgagaggggagctgaggacatgttcatcgttgagttggaggacgtgggt
gatgtcatagagaagatccgtattggtcatgacaacagagggctaaacggaggctggcac
ctggacagagtggagatcagacgactgctgaggaaggggaaggggtcggagactattatc
ttcccatgtgagcgctggctggccaagtcagaggatgatggagaaacagtgagagagtta
gtaccttctgacatcataacggagaaactactacgagatggtaccctgaaagtcagcgag
gttgaggtggaagatgcactggagactcacacttacaaagtgtctgtgatgacgggcgat
gtttacgacgcaggcaccgatgccaacgtcttcctgaccatctacggagacctgggagac
actggcgagcgcaaactcagcaagtctgagaccaacggcaacaagtttgagagaggagcg
gtggataagttcaccattgaggcggtggacctgggtcaggtgtttagaatgaagattcgc
catgacaacagcatgatgagtgctgattggtacctggaccaggtggaggtggttgacgag
gatacggaggaggtcttcctgttcctgtgtgagcgctggctgtccagaaagagagaggac
agacgcatcgaaaggatgttctatgtcaagggttacgaaggggagagggagactatccag
ggcagtaagaagagctcagccctgatcatgaagagtgtggacagcaacgtgaacaagaag
aagaagaagggggaggacgtccaaaaggagagcaccatcattccataccacttcaccatt
tccacgggggaagaaaacgatgccagtacctgcagcagggtctatgtgatcatcatgggg
ccaaaccacacccagacacagaggctgtggctggacctgcctggggggaagaagtgcttt
gagtctgggtctctggagtccttcgaggctcatggagctgacgttggtgagattaaaaaa
gtggagctcggacatgacggcgccactccggagagctgctggttggttgatgagctagct
gttgccgtgccaaccaaaggggttaaatacattttccagtgtaagtgctggttggccaaa
gatcggggcgatggactgactgccagggtgttcaacgtgttggatgcagatagcatcacc
atctcccaaaagatcatctatgaggtgacggtggtgacgggagatgttcagaacgctggg
acagacacccagatctacgtgtccgtgtttgggaccaacggcaccacagaggaagtccta
ctgcagaagaacgaggacaggtttgagcggggtcaggaggacacgttcagcctggaggtc
gatgatattgctcccctgaggaagatgagggtccgtgttgacggctctggtagccgacct
gactggttcctggctaagatcatcatgcgtaacctgaccacagaggaggtgtcagtgttc
acctatgaggagtggctgtctaagaccaaaggacccaagaggaccatgatctgtgagatg
gctgctgtggtggatgaggaggagatggtggagatcaccacctacattatccaggtcaag
accagcgacattggaggggcaggcactgacgctaacgtgtggatcattgtgtttggagag
tgcggtgacactgggaccctggcgctgaaagagtgccagaaatccaacaagtttgagcgc
aagcagacagatgtgttccgtttccctgatgtgctcagcctcggggagctctctaaggtt
cgggtgtggcacgacaactcagggcctgctccaggatggcacatagaatacatcgatgtg
aaggatgaggccttggacaggacatttcgcttcccctgcgaccgctggttggctcagaac
gaggacgatggtcagatcatgagggagttgtcctgcgccaacaacgacattttagacctc
aacgagaagaccaaatatgaaattattaccaccacggcggacacagacgacgcagagacc
aaagagaacgtctggatcgcactggaggggaagaaggggcgttcaaaagaatttatgatg
gagaactcatcaaagaaaaagaggttcctgcggggaaacaaggacaagtttgagttctcc
tccaaacagcttggggacattgctggcatctgcctgggccacacccccaaggatgggaag
aaggtgaaaggtgaggcgttctggcacgtgaaggaggtcgttgtcatagagaaagtgctg
ggcaacaggttcatattcatctgcaatgccctgatccccctctccccgaagagggacgag
tttgtgaccatcgagtgcaccaaggccatcgagagcttcgccagcaaagcccgcagcctg
gtgcctgtcaagtacgagatcatcctcatcacgggcgacgagaagggggcaggcaccgat
gccaatgtcttcatcaccatctacggttccaacggcgactcgggccgccggtcgctacgt
cagaagttccgcaacctgtttgagcgtggccagacggaccgcttcctgctagagatgttg
gacatgggtgagctgctgagagtgtgtgtggagcatgacaatacccgcctcagccccggc
tggctgctggaccgcgtggaggtcaccaacacagccaatggtgtcaccaccatcttcctg
tgtggaaagtggctgaacaccaagaaggcggacggacagatcttcagggtcctctaccca
aagtactaa
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integrated database retrieval system
