Oncorhynchus tshawytscha (Chinook salmon): 112219908
Help
Entry
112219908 CDS
T05605
Name
(RefSeq) rho GTPase-activating protein 29-like isoform X1
KO
K20644
Rho GTPase-activating protein 29
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
112219908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112219908
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112219908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GMIP-like_FCH
RhoGAP
RHG29_45_N
C1_1
Motif
Other DBs
NCBI-GeneID:
112219908
NCBI-ProteinID:
XP_042185097
LinkDB
All DBs
Position
LG10:complement(79862191..79950911)
Genome browser
AA seq
1567 aa
AA seq
DB search
MIRKSSSGTGGGEEEENNTKHQQNKPHCSSITSNMGRSSRTTNPLGSMGLGSNSLGLGST
VVGAPGVDPDYVMQLVNDVRRFSDMLLSLKEAFHSEESHERLPQRVQERLSELLRVLKSV
IGKHQTLNSVDILRAAGTVITKVKGINFTEVNPEKKKVIFGEIYTSIDSLAFTFGNVVSD
FLMGDVDSQSGLGIPQTRRSRSFENLSVDSGGYVPEKKGLVGPEVALSKEEEVAVILQKN
DSGVESALLYAKAWSKYTKDLLAWVDKRLGLDIECAKSYAKMAESAKTLASQQDYMPFRD
IYISTFKNDIEYSQLLLQTATALQTNKFIQPLLSRKTELDRLRKDLKEQWQREQKKMQES
EAALRKARWTQVQRRDEYHKAQSSASRSQEEQSKQLDKKRKLEEEALQKAEDARDQYRSC
VTDAGARRAELASTKTDILTQIRELVTQCDLTLKAVTVNWLQLQQAQTVPLPGHYQALCE
NAKMYEPGQRYAEFVRNLPKDQIHMESFSVDERFPVFSKRSTGSTSSHSNLSQVSLISGD
VLSGDEVDSPLGSRPGEGSNSATDIQGLRGGQGPLRAWASGVQDRGMCSDSESAGGSSES
QSMDSPTASPGDFKRRLPRTPSTGTMSSADDLDERQPPSPSDNGLGEMVTETASSPGPFR
NAQMSKASQTHKLRKLRAPSKCRECDSLVVFHGAECEECSLACHKKCLETLAIQCGHKKL
QGRLQLFGIDFTQAAKNSPDGIPFIIRKCTSEIENRALNLKGIYRVNGAKSRVEKLCQAF
ENGKDLVELSDLSPHDIANVLKLYLRQLPEPLILYRYYNDFIGLAKESQRVIIEEKAVAR
VLQEHGRPGGEQPRPGGTQSGVEGEQPPLTTRQPGGGELPKQPSIKLNRVIFKIRDLLRQ
LPPAHYRTLRFLTAHLHRVTEQAEENKMTASNLGIIFGPTLVKPRQTDAEVSLSSLVDYP
YQALMVELLVRHFQVIFDLSSPSSYPPTTTSTVGQSSPRLTSQEKEQRLSPSSYPPTTTS
TVGQSSPRLTPQEKEQRLSRHSTSLLDMKEQSAKVDKRHSSVIQSSQTLDDVREVKTDRT
GPDRRELTAGSSSSAAGSSSSAAGSASVQRSTLVFGRPSLNLSSSATAQKVQLRPQRARI
LSRPISMPLERLPLPTPSQVLDRNSRNNNAAITLDPTANTIVESAEPEKPRIGGGSRVST
YYIDTQQAVQRRPWDRKYKHYDVTPRTAMIMANLPPAGTSPGPKPGKQPTMPTQLSVSGT
TSSALPSSSGFSTIFPSNPYTVLLKASQASTRDREETKDRPNSAAGGGGETRTSTNSPIK
FRQPRILQPPPGTFYKPSGYSGARGWPSLSTSGTTSLTKMSPTSPTGKASSQTSPTGKAS
SQTSPTGKASSQTSPTVKTFSPTSPTVKTFSPTSPTVKTFSPTSPTVKTFPTSPTVKTFP
SSPTVKNFPTSPTVTAPLPLSSSQSSSMTFSSSPMVTTTTTPSPTATYILQTPHLPTHTL
QDSVDSSVSVDPEVTTSADLSPRQSPPPSSPEDPSPPEVVPLQQRLRPRPRPGARLQELE
HREAHFV
NT seq
4704 nt
NT seq
+upstream
nt +downstream
nt
atgatacggaagagcagcagtggtactggaggaggagaagaagaagagaataatacaaaa
caccaacagaacaaaccgcattgttccagcatcacctccaacatgggccggagctccagg
accaccaacccactggggagtatggggcttgggtccaacagtttgggtctggggtccacc
gtggtaggagcgcctggggtagatccggactatgtgatgcagctggtgaatgacgtacgg
aggttttcagatatgctgctcagccttaaagaagcattccattctgaagaaagccacgag
agactccctcagcgggtacaggagcggttgagcgagctgctccgtgttctcaagtctgtc
atcggcaaacaccagaccctcaactctgtagacatcctcagggctgccggcaccgtcatc
actaaggtcaaaggcattaacttcacggaagtgaacccggaaaagaaaaaggttatattc
ggcgagatatacacgtccattgacagtttggcattcacatttggcaatgtagtgtctgac
ttccttatgggggatgtggacagccaatcagggttggggatcccccagaccagaagaagc
aggtcttttgagaacctctctgtggattctggggggtatgttccagagaagaaaggcctt
gtgggcccagaggtggcgttgtctaaagaggaggaggttgccgtgatcctgcagaagaat
gacagcggggtggagtcagctctgctctatgccaaggcctggtccaagtacaccaaggat
ctgctggcctgggtcgacaaacgcctgggactggacattgaatgtgccaaaagttatgcc
aaaatggcagaatctgcaaagacgctcgcgagtcaacaggactacatgccgttcagagat
atctatatttctacgtttaagaatgacattgagtacagccaactcctcctgcagactgcc
actgccctgcagaccaacaaattcatacagccgctgttgtccagaaagactgagctggac
agactgaggaaagacctcaaggagcagtggcagagagaacagaagaaaatgcaagagtcc
gaggcggctctgcgtaaggctcggtggacccaggtccagaggagagacgagtaccacaag
gcccagtcctcagccagccgctcccaggaggaacagtccaaacagctggacaagaagagg
aaactggaagaggaggctcttcagaaggctgaggatgccagagaccagtacagatcctgt
gtaactgatgcaggggccaggagggcagagctggccagcaccaagacagacatcctcact
cagatcagagaactggtgactcagtgtgacctcacactcaaagctgtgacagtcaattgg
ctccagctgcagcaggcccagaccgtgcctctccctggccactaccaggccctgtgtgaa
aacgcgaagatgtacgagcctggacagagatacgcagagtttgtcagaaatcttcccaaa
gatcagatacacatggagtccttctccgttgatgaacggtttcctgtgttcagcaagcgt
tcaacgggcagcaccagttcccatagtaacctgtcccaggtgtccctcatctccggtgac
gtcctgagtggcgacgaggtggatagtcctctggggtcacgacctggggaagggtccaac
agcgccacagacatacaaggtctgagagggggacagggcccgttgagagcctgggcatca
ggtgtccaggacagggggatgtgtagtgactcagagagtgctggaggcagcagtgagtcc
caatccatggactctcctacagcgagcccaggtgactttaaacgcagactacccagaacc
ccctccactggcactatgtcctcggcagacgacctcgatgagagacagccaccttcaccc
tcagacaatggtctgggtgagatggtgacagagacagccagttccccaggtccgtttcgt
aacgcccagatgtccaaggcgtctcagacacacaagctgaggaaactcagagctccgtct
aaatgcagggagtgtgacagtctggtggtgttccacggagcagaatgtgaagagtgctcc
ctggcgtgtcataagaagtgtctggagactctggccatccagtgtggtcataagaaactg
cagggaagactacagctgtttgggatagactttacccaggcagcgaagaacagcccagat
gggatccccttcatcatcaggaagtgtacctctgagatcgagaacagagcgctcaacctc
aagggaatctaccgtgtgaacggggctaagtctcgtgtggagaagctgtgtcaggcgttt
gagaacggcaaagacctggtagagctctctgacctctcaccccacgacatcgccaacgtg
ctcaaactctacttgagacagttaccagagccgttgatcctgtaccgctactataatgac
ttcatcggattggccaaggagagccagagggtcatcatcgaagagaaggctgtagccagg
gtcctccaggaacatgggcggccagggggtgaacaaccccgaccaggaggcacccagtca
ggggtagagggagagcagcctcccctgacgaccagacaacctggaggaggagagctgccc
aaacagcccagtatcaaactcaacagagtcatctttaagattagagacctgttacgacag
cttcctcctgcacactacaggaccctccgcttcctcacggcacacctacatagggtgacg
gagcaggcagaggagaacaagatgacagccagtaatctgggcattatctttggccctacg
ctggtcaaaccccgacagactgacgcagaggtctccctgtcttctctggttgactacccc
taccaggctctgatggtggagctgctggtacgtcacttccaggtcatctttgacttgtcc
agcccctcttcctacccccccaccaccacctccacggtgggccagtcctccccccgactc
acctctcaggagaaggagcagagactcagcccctcctcctacccccccaccaccacctcc
acggtgggccagtcctccccccgactcacgcctcaggaaaaggagcagagactcagccgc
cactccacctccctgctcgacatgaaggagcagagtgccaaagtcgacaagaggcactcg
tcagtcatccagtcctctcaaaccctggatgatgtgagagaggtgaagacagacaggaca
ggaccagacaggagagagttaacagccggctcctcctcctctgctgctggctcctcctcc
tctgctgctggctctgcctcggtccagagatctaccctggtgtttggccgtcccagcctc
aacctctcctcctctgctacggcccagaaggtccagctccggccccagcgcgctagaatc
ctgtctcgaccaatcagcatgcccctggagcgcttgcccctccccaccccctcacaggtg
ctcgacagaaacagccgtaacaacaacgctgccatcacgttggatcccaccgctaacacc
atcgtggagtcagccgagccggagaagcctcggattggtggggggtcaagggtcagtacc
tattacatcgacacccagcaggccgtgcagcggaggccctgggacaggaagtacaaacac
tacgacgtcacgccacgcaccgccatgatcatggctaacttaccgccggccggtactagc
cctggcccaaaaccggggaaacagccgacgatgccgacacaactgtccgtgtctgggaca
accagctctgctctcccatccagtagtggtttcagcactatattccccagcaacccatac
acagtgttgttgaaggctagccaggcgtccacaagagacagagaggagactaaggatagg
cctaactctgctgctggaggtggtggggagaccagaacatctaccaactcccccataaag
ttcagacaaccaaggattctgcagcctccacccggaaccttctataagccgtctggttat
tcaggcgccagaggctggccatcattaagtacctctgggaccactagcctcaccaaaatg
tccccaacttctcctactggtaaagcctcttcccagacttctcctactggtaaagcctct
tcccagacttctcctactggtaaggcctcttcccagacttctcctactgttaaaaccttc
tcaccaacctcccctactgttaaaaccttctcaccaacctcccctactgttaaaaccttc
tcaccaacctcccctactgttaaaaccttcccaacctcccctactgttaaaaccttccca
tcctcccctactgttaaaaacttcccaacctcccctactgtcactgctcctctccccctc
tcttcctcccaatcctccagcatgactttctcctcttctcctatggttaccaccaccacc
accccatcccctactgccacttacatccttcaaaccccacaccttcccacacacactcta
caggactctgtggacagctctgttagtgttgaccccgaggtcacgacctccgctgacctt
tccccccgccagtcccctccccccagcagcccagaggaccccagcccgcccgaggtcgtc
ccgctgcaacaaagactgagaccccggcccagacccggcgctcgcctgcaggagttagaa
cacagagaggcccattttgtctga
DBGET
integrated database retrieval system
