Oncorhynchus tshawytscha (Chinook salmon): 112219968
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Entry
112219968 CDS
T05605
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 19
KO
K08633
a disintegrin and metalloproteinase with thrombospondin motifs 19 [EC:3.4.24.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112219968
Peptidases and inhibitors [BR:
otw01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
112219968
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_C
ADAMTS_spacer1
ADAMTS_CR_2
Reprolysin
TSP_1
Reprolysin_5
Reprolysin_3
Pep_M12B_propep
Reprolysin_2
Reprolysin_4
TSP1_spondin
Peptidase_M10
PLAC
TSP1_CCN
DUF3810
Motif
Other DBs
NCBI-GeneID:
112219968
NCBI-ProteinID:
XP_042158638
LinkDB
All DBs
Position
LG20:complement(43244855..43368130)
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AA seq
1159 aa
AA seq
DB search
MHLKRIFSLLHQLCFLGAFAIADPHPFQESESEIIFPEVFPDTGPPAPDKPNSRETDASA
GAPDKPTSRETDASAGSSSREVRSISNWEEYESPELYHWEPQGPQTAASTGLRLRIPAFG
RDLHLILKRDTRFLSQKFMVERRQKAQKASRSSMPVSSAANTEERGCYYSGTVLNDAGSI
ASFSTCAGLMGFIQLDGDFLYIEPVNKTLAVTGQAHRVYRRKRSTTEERQTDKQTTDKQT
SSNYCGVIPERQKSKNRKPSEGGRGKRYLYKLLHEYNVETVVVADPAMVSYHGTEAAKRF
ILTIMNMVFNLFQHKSLGIQINIRLTKLVLLHETPSDMYIGHHGEKMLESFCRWQQEEYG
KKSVMSDFSTRWREDLPSVDTAILITRKDFCVHKDEPCDTVGIAYLSGMCSERRKCILAE
DNGLNLAFTIAHEMGHNMGVSHDNDHQSCADGLHIMSGEWVKGQNLGDVSWSGCSRDDVE
KFLRSKASSCLLQTDPLSLNSVILPFKHPGMTYTADEQCQILFGTTASHCQNMQYVMCSG
LWCRVDGEKDCKTKLDPPMDGTECDPGKWCRAGECVSRAVPVEQAMGEWSTWGSWGTCSP
TCSTGISGRQRKCESPSGKSRDCVGSRMQYRLCENLPCPAGSPSFRDQQCQTFNRPSLHW
HSIMDDERPCTLFCSSTGKEQPRLLAEKVLDGTSCGSQESGLCANGTCQKVGCDRILSSM
AREDHCGVCNGNGKSCKVIKGDFNHTKGAGYVEAVIIPKGARRIRVMEEKPAQSYLALKD
TNKHSINSDWKIDRPGAFNMAGTTVHYVRRGLWEKMSARGPTTSPLHLMVLLFNEQNHGI
HYEYTIPTEANMEPQGGLGPGAMPSEPLFMWTHSGWEDCHAVCGGGERKTIVTCTNIVNK
TTSVVDNRRCRHLTKPEPQVRKCNEQPCQTRWMMTEWTSCSRTCGRGSQSRQVACTLQLA
NGTLVKAKDRDCAGPKPAPNQRCEGQDCLTVWEAGVWSECSVKCGRGARHRLVKCTNPRK
KCDLSTLPRETEDCEDYSKCYIWRTGDWAKCSVTCGKSMQSRVIQCMHKITGRHGNECFS
SEKPAAYRPCQQQACNERINVNTITSPRLAALTFKCLRDQWPVYCKVIREKNLCQDMRWY
QRCCETCRDFYAQKMQQRS
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgcatctaaagcgcatcttcagtctcctccaccagttatgttttcttggagcatttgcc
attgcagatccacaccccttccaggaatccgagtccgaaattattttcccggaggttttt
ccagatacaggtccaccggctcctgataaaccaaatagccgagagactgacgccagcgcc
ggagctcccgataaaccaactagccgagagactgacgccagcgccgggagcagctctcgg
gaggttcgttccatttcaaactgggaagagtacgaatctccagagctataccattgggaa
cctcaaggaccgcaaacggctgcttccacaggactgagactcagaattcctgcttttggc
agggacctgcacctcatcctgaagagagacactcgatttctgtcccagaaattcatggtg
gagaggagacagaaagcacaaaaggcatctcggagcagtatgccagtttcgtccgctgcc
aacacagaagagagaggatgctattacagcggaactgttctcaatgacgcaggatccatt
gcctcattcagcacctgcgcaggactgatgggcttcattcaactcgatggagacttcctc
tacatcgagcctgtcaataaaacgctggccgtcacgggacaggcccaccgcgtgtacagg
aggaagcgctccaccaccgaggagagacagacagacaagcagacgacagacaaacagaca
agcagcaactattgtggagtcattccagaaagacagaagagtaagaacaggaaaccgtct
gagggaggcagagggaagcggtacttgtataaactactccacgagtacaacgtggagact
gtggtggtggccgacccagctatggtcagctaccacggcacagaggcagccaaacgattc
atcctcaccatcatgaatatggtgttcaacttgtttcaacacaagagcctgggaatacag
attaatatcagattgactaaacttgtgctgcttcacgaaacaccatcagacatgtacatt
ggtcaccatggtgagaagatgctggagagtttctgtcgttggcagcaggaggagtatggg
aagaagagcgtgatgtcagacttcagcactcggtggagggaggacctaccctctgtggac
acagccattctaatcacacggaaggatttctgcgtgcataaagatgaaccctgtgacact
gtaggcattgcctacctgagcggcatgtgcagcgagagaaggaaatgcatcctagctgag
gacaacggcctcaacctggcctttaccatcgctcacgaaatgggccacaacatgggtgtg
agtcacgacaacgaccaccagtcgtgtgcggacggcctccacatcatgtcgggagaatgg
gtcaaaggtcagaacctgggcgatgtttcctggtctggctgtagccgtgacgacgtggag
aagttcctccggtccaaggccagtagttgtctcctccagaccgacccgctgagcttgaac
tcagtgatcctgccattcaaacacccagggatgacttacacggcagatgaacagtgtcag
atcctcttcggaaccaccgcctcccactgtcaaaacatgcagtatgtgatgtgttcaggg
ctgtggtgccgggtggatggagagaaggactgtaaaaccaaactggacccacccatggat
ggcacagagtgtgacccgggaaagtggtgtcgtgctggggagtgtgtgagcagagcggtg
ccagtggagcaagccatgggggagtggagcacctgggggtcctggggaacctgcagtcca
acctgcagcactggcatcagtggacgccagcgcaagtgtgagagtcccagtgggaaaagc
cgggactgtgtcggctccaggatgcagtacaggctgtgtgagaacctaccctgccctgct
gggagccccagcttcagagaccaacaatgccagaccttcaatcgcccctccctacactgg
cactccatcatggatgatgagaggccctgtacactgttctgttcctccacagggaaagaa
caaccccgcctcctggctgagaaggtgctggatggaacctcctgcggctctcaggagtct
ggcctctgtgccaacgggacatgtcagaaagtgggctgtgacaggatcctgagttcgatg
gcaagagaggaccactgtggggtgtgtaatggcaacggcaagtcttgtaaggtcatcaag
ggggacttcaaccacaccaaaggagcaggctatgtggaagctgtgatcatccccaaaggg
gccaggagaatcagagtgatggaagaaaagcctgcacagagttatttggcactcaaagac
acaaacaagcattccatcaacagcgactggaagatagaccgcccaggagccttcaacatg
gcgggcaccaccgttcactacgtccggagaggactgtgggagaaaatgtcagccagaggt
cccactacctccccgctgcatctcatggtgctgctgttcaatgagcagaaccatggcatc
cattacgagtacaccatccccacagaggctaacatggaaccccagggagggttaggaccg
ggggccatgcccagcgaacccctcttcatgtggacccactctggctgggaggactgccat
gccgtgtgtggaggaggagaaagaaagacaatcgtcacctgcactaacattgtcaacaaa
actacaagcgtggtggacaaccgaagatgtcgtcacctgaccaaacctgagcctcaagtc
cgcaagtgcaatgagcagccctgccagacaaggtggatgatgactgagtggacgtcttgc
tctcgtacctgtggtagaggctctcagagcagacaggtagcctgcaccttacagctagcc
aacggcaccctggtcaaagccaaggaccgcgactgtgccggccccaagccggcccccaac
cagcgctgcgagggccaggactgtctcaccgtgtgggaggctggcgtgtggtctgagtgc
tcggtgaagtgtgggcggggggcgcgccatcggctggtgaagtgcaccaacccacggaag
aagtgtgacctgtcgaccctgccccgtgagacggaggactgtgaggactactccaagtgt
tacatctggaggacaggagactgggccaagtgctcggtcacctgtggcaaaagcatgcag
tcccgggttatccagtgcatgcacaagatcaccgggcgccacggcaacgagtgcttctcg
tcggagaagccggcggcgtaccggccatgtcagcagcaggcgtgcaacgagaggatcaac
gtcaacaccatcacctcgccacgcctggctgccctgacgttcaagtgtttacgggaccag
tggccggtttactgcaaagtcatccgcgagaagaacctctgccaagacatgcgctggtat
caacgctgctgtgaaacttgccgggacttttacgcacagaagatgcagcagaggagttga
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