Oncorhynchus tshawytscha (Chinook salmon): 112219969
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Entry
112219969 CDS
T05605
Name
(RefSeq) red-sensitive opsin
KO
K04251
long/medium wavelength-sensitive opsin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
otw04030
]
112219969
G protein-coupled receptors [BR:
otw04030
]
Rhodopsin family
Vision
Opsin
112219969
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srw
7TM_GPCR_Srv
TctB
7tm_4
Motif
Other DBs
NCBI-GeneID:
112219969
NCBI-ProteinID:
XP_024237234
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Position
LG02:complement(20293071..20295988)
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AA seq
403 aa
AA seq
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MAGIKPHRLGYTILLVANTTTGDQQDKTTEANHKTEKKRPTDTFSEMAESWGSAAYAARR
QNQDTTRESSFTFTNSNNTKDPFEGPNYHIAPRWVYNVSTLWMIIVVILSVFTNGLVLVA
TAKFKKLQHPLNWILVNLAIADIGETLLASTISVCNQFFGYFILGHPMCVFEGYTVSTCG
IAALWSLAVISWERWVVVCKPFGSVKFDAKWAMGGIIFSWVWAAFWCAPPIFGWSRYWPH
GLKTSCGPDVFGGNEDPGVKSYMITLMITCCFFPLFVIIFCYIFVWLAIRAVAAQQKDSE
STQKAEKEVSRMVVVMIIAYCVCWGPYTCFACFAAANPGYAFHPLAAAIPAYFAKSATIY
NPVIYVFMNKQFRTCIMQLFGKAEDDGTEVSTSKTEVSSVAPA
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggctggtataaaaccccacagattggggtacaccatcttgttggttgctaacaccaca
acaggtgatcagcaagacaagacaacagaagccaaccacaagacagagaaaaagcgacca
acagatactttctcagaaatggcagaaagctggggaagtgctgcttatgcagccaggcga
caaaaccaagatacaacgagagaatcttcctttaccttcaccaacagcaataacaccaaa
gatccctttgagggccccaactaccacattgctccaagatgggtgtacaatgtttcaaca
ctttggatgatcatagtggtcatcctctcagtcttcaccaatggcctggtactggtggcc
actgcaaaattcaagaagctccaacaccctctgaactggatcttggtcaaccttgctatt
gctgacattggagaaacacttttggcaagcaccatcagcgtttgcaaccagttttttggc
tacttcattctgggacatccaatgtgtgtctttgagggatacactgtctccacttgcgga
attgctgctctgtggtccctggctgtcatctcttgggagagatgggtggtggtgtgcaag
ccctttggaagtgtcaagtttgatgccaaatgggccatgggaggcattatcttctcctgg
gtctgggctgctttctggtgtgccccccccatctttggctggagcaggtactggcctcac
ggcctgaagacttcctgcggacctgatgtgtttggaggcaatgaggatcctggagtcaag
tcctacatgattactctcatgattacatgctgcttcttccccctgttcgtgatcatcttc
tgctacattttcgtgtggctagccattcgtgctgttgctgcgcaacagaaagactctgag
tcaacacagaaggccgaaaaggaagtgtccaggatggttgttgtcatgattatagcttac
tgtgtatgctggggaccttatacctgctttgcctgctttgctgcggctaaccctgggtat
gctttccaccctctggcagccgcaattcctgcctactttgccaagagcgccaccatctac
aatccagttatatatgtcttcatgaacaaacagttccgtacttgcatcatgcagctcttt
ggaaaggcagaagatgatggcactgaagtgtctacatcaaaaacagaggtttcctctgtg
gcacctgcataa
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