Oncorhynchus tshawytscha (Chinook salmon): 112219997
Help
Entry
112219997 CDS
T05605
Symbol
cxxc1b
Name
(RefSeq) CXXC-type zinc finger protein 1b isoform X1
KO
K14960
COMPASS component SPP1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112219997 (cxxc1b)
03036 Chromosome and associated proteins [BR:
otw03036
]
112219997 (cxxc1b)
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
112219997 (cxxc1b)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
112219997 (cxxc1b)
COMPASS/SET1 complex (yeast)
112219997 (cxxc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
Motif
Other DBs
NCBI-GeneID:
112219997
NCBI-ProteinID:
XP_024237284
UniProt:
A0A8C8JC15
LinkDB
All DBs
Position
LG02:complement(20189767..20200283)
Genome browser
AA seq
588 aa
AA seq
DB search
MSSASTQLLEIFQQNDFMDSEVSDFEPAPGLESSMEGENAPVYCICRKPDINCFMIGCDN
CNEWFHGNCINLTEKMAKAIRQWYCLRCRDKNPSLEIKYRPKKSREKEAEGQREPERKFE
RQNSTPDYKSERRRGSKVKRSARMCGECEPCLRTEDCATCDFCKDMKKFGGPNKIRQKCR
FRQCDVRARKMLRVKDEEFNLRERRDNSYHRRRRYSDDYDSEAELYEKYKAAGYDDNMPW
LSDEDDGPPFSPVLRKKAVKVKHVKRRENKFDKKKESRRHKQKQKHKDKVRHSDRGDARD
GGGQRQCLGPSCVEAARANSKYCSEECGMKLATNRLYEILPQRIQQWQQSPCIAEEQGKK
QLERIRRDQQNARMRLTDMEKRFHELEGIIAKAKQQVVQQDEETNEGDNEETDLMIFCVS
CSHPINPKVALRHMERCYAKYESQTSFGSMYPTKIEGATRLFCDVYNPQSKTYCKRLQVL
CPEHSRDPKVPGDEVCGCPLVRNVFEATGEYCRVSKRKCNKHYNWEKLRRAEVDLERVRV
WYKLDELFEQERNVRTAMTNRAGLLALMLHQTIQHDPLTTDLRCNKDR
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctgcgtcaacacaacttttggagatatttcaacaaaacgattttatggacagt
gaagtgtcagactttgagcctgcaccagggcttgagagcagtatggagggcgagaatgca
ccagtgtactgcatttgtcgaaaacctgacatcaattgcttcatgattggttgtgacaac
tgtaatgagtggtttcatggtaattgcatcaatctcacagagaagatggccaaagctatc
aggcagtggtactgcctgcgatgccgagacaaaaacccatcattggagataaaataccgt
ccaaagaagagccgtgaaaaggaggcagagggccagagagagccagagagaaaatttgaa
agacaaaacagcactccagattataaatctgaaaggcgccgtggatcaaaggttaagcgc
tctgctcgtatgtgtggagagtgcgagccctgcttgaggactgaggactgcgccacatgt
gacttctgcaaggacatgaagaaatttgggggtcccaacaaaataagacagaagtgtcga
tttaggcagtgtgatgtccgagccaggaaaatgttgcgtgtgaaggatgaagagtttaat
ttgcgtgaaaggcgggataattcctaccaccggagaagacgatactcagacgactacgat
agtgaggcagaactctatgaaaagtacaaggcagcgggatatgacgacaacatgccatgg
ctcagtgatgaggatgacgggcctccattcagccctgtcctgcgaaagaaagctgtgaag
gtcaagcatgtgaagagacgggaaaataaatttgacaagaaaaaagagtcacggcggcac
aaacagaaacagaagcacaaggacaaagtcaggcacagtgataggggcgatgccagggat
ggaggagggcagcgacagtgcctcgggcccagctgtgtggaagctgcacgagccaactca
aaatactgctcagaagaatgtggcatgaagctggctaccaaccggctctatgagatactc
cctcaacgtatccagcagtggcagcagagcccctgcatcgctgaggagcagggcaagaag
caactggagcggatccgaagggatcagcagaatgcacgcatgcgtctcactgacatggag
aaacgcttccacgagctggagggaatcattgctaaagccaagcagcaggtagtccagcag
gatgaggagacgaatgaaggggacaatgaagaaacagacctgatgattttctgtgtgtcc
tgcagtcaccctatcaacccgaaggtggcactgcgacatatggagagatgctatgctaag
tatgagagccagacatcttttggttcaatgtacccaacaaagatcgaaggagcaacaaga
ctcttctgcgatgtgtacaacccccagagcaaaacctactgcaaaaggcttcaggttttg
tgcccagaacattccagggacccaaaggtcccaggggatgaggtgtgcggctgtcctctg
gttcgtaatgtgtttgaggcaacaggcgaatactgcagggtttctaaacgcaaatgtaat
aagcactacaactgggagaagctcaggagagctgaggtggacctggagcgtgtcagagtg
tggtacaagctggatgagctctttgagcaggagcgcaacgtcaggactgctatgaccaac
agggcaggtctacttgctctcatgctgcaccaaaccattcagcacgaccccctgacaacg
gatctccgttgcaacaaggacagatag
DBGET
integrated database retrieval system
