Oncorhynchus tshawytscha (Chinook salmon): 112220002
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Entry
112220002 CDS
T05605
Name
(RefSeq) SUN domain-containing protein 1-like isoform X1
KO
K19347
SUN domain-containing protein 1/2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112220002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112220002
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
LINC complex
112220002
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sad1_UNC
DUF3450
CEP63
DUF5000
Transcrip_act
ATG17_like
DUF1664
DUF4795
Motif
Other DBs
NCBI-GeneID:
112220002
NCBI-ProteinID:
XP_024237302
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All DBs
Position
LG20:39921565..39929047
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AA seq
540 aa
AA seq
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MSRRSARLLNGGYYDQSSDDESSGSIVSYKESPVPRVFNKRKMRTGGHKGIQNPNRPING
DELIGMVPTVRAVQRRQTFLSPAVVPVPVTPATSVALQPSMSSSSIGFTRIDSSGYCSDS
EEPLRAKPCSSGIGTRASASCSWSCFPNGFPSWFVIFLLPVLLTFLFVFPIVFPTMNLNI
PMNRPTQPDSPLDLTPKATYGSPIMDSALKNKMDTIQREIEILKQKAHQHQGISQQMVQR
LNIDMRGVRSEINNVREKVNSVSISVSAAGERLAQDAAEFSSKMSDFQEEQSITTQLVRA
LEDTSDTLQQQVTFIQNHPPPAPTPENIHMTPAFKEAMEKWLSDRLAQNERWDVKQLIKD
CSRPLADRLPDFALESQGGSIVTSRCSETYQTRSACVSFLGIPLWYPAETPRTVIQGQQV
LPGKCWPFPGAQGTMTIALSHPIHVTHVSLEHLSTAVSPNGRIDSAPKDFAVYGMSTVGE
EGSLLGMFTYDQAGDPLQTFELPNPTAVYRYVELHVLSNWGHQDYTCVYRFRVHGKMSFF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgtctagaagaagtgcaaggcttcttaatggagggtactatgaccagtcctctgacgat
gaatcctctggctccattgtctcctacaaggaaagccctgtgcctagggtattcaacaag
aggaaaatgagaactgggggccataagggaatccaaaatccaaatcggccaatcaacggc
gatgaattaattggcatggtgccaactgtgagggctgtccagagaaggcagaccttcctg
tctcctgctgtggtccctgttcctgtgacccccgctacctctgtggccctgcagcccagc
atgagctcctccagcattggcttcaccagaattgacagctcaggctactgctctgattct
gaggagccactgagggctaagccatgctccagcgggataggcactagggccagcgctagc
tgcagctggtcatgtttcccgaatggtttcccatcctggtttgtcatcttcctcctgcct
gttctcctgaccttcctatttgtctttccaatcgtgttccccaccatgaacctcaacatt
ccaatgaaccgcccgactcaacctgactctccactcgacctgactccaaaggctacgtat
ggaagtcctatcatggattcagctctcaaaaacaaaatggacaccatccagagagagatt
gagatccttaaacagaaagcacaccagcaccaaggcatttcccagcagatggtacaaaga
ctgaatatagacatgaggggagtaaggagcgagattaacaacgtcagagagaaagtgaac
agtgtctctatttctgtctctgctgccggagagcgtcttgcccaggacgctgcagagttc
agcagcaagatgtctgatttccaagaggaacaatccattaccacacagctggtcagagcc
ctggaggacaccagtgatacgctgcagcaacaggtgaccttcattcaaaaccatcctccc
cctgctcccacaccagaaaacatacacatgacgcctgcctttaaagaggccatggagaaa
tggctgagtgaccgactggcccagaatgagagatgggacgtgaaacagttgataaaggat
tgcagtcgtccattggcggaccgactgcctgactttgccttggagtctcaaggtggcagt
attgtaacaagcagatgctctgagacgtatcagacccgttcggcctgcgtgagcttcctg
gggattcccctgtggtatcctgcagagaccccccggactgtcatccagggccagcaggtg
ctgcctggcaagtgttggccatttcctggggcccagggcactatgaccattgccctgtct
caccccatccacgtgacccacgtctctttggagcacctctccactgcagtctcccctaat
gggcgcatcgacagcgcccccaaggactttgccgtctacggaatgtctactgtcggcgaa
gagggatcactgctcggaatgtttacatatgaccaggctggagatcccctacagacgttc
gaattgcctaaccctactgcagtgtatcggtatgtggagctccatgtcctcagcaactgg
ggtcaccaggactacacctgtgtgtaccgcttccgggttcacggcaagatgtctttcttt
tga
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