Oncorhynchus tshawytscha (Chinook salmon): 112220003
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Entry
112220003 CDS
T05605
Name
(RefSeq) uncharacterized protein LOC112220003 isoform X1
KO
K11589
methyl-CpG-binding domain protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112220003
03036 Chromosome and associated proteins [BR:
otw03036
]
112220003
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
112220003
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
112220003
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CXXC
MBD
Motif
Other DBs
NCBI-GeneID:
112220003
NCBI-ProteinID:
XP_024237308
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Position
LG02:complement(20164941..20180865)
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AA seq
893 aa
AA seq
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MEVDGEVLKPTNDALLEREERIEVGDNGMERTSEVLSPLEALAPSDSLDIQDHATSGPVM
TDHGHTEKIPGGVALEPPIDWFEPLEDDNYEDDTQGLDMGLAMGERHMNSRGDAEEESVA
GSERSGSVAGSERNIKNNNNLFSVYRRKKRVKTEEGWEDWPALGEGWKRKAVVRRSGSSV
GQSDVYYMSPSNERVRSRVELSKVLADTLDMTMFDYKAGVFRGAGQPKTLRLRKNIQKDH
STSVDCGFSSESSSMGTPSRDTHLQHITPPRPNTSLTQISSASVAHDVEGMKHSATKLPW
SPVSALSVSINGKAGSEPSFCVCTICDNSYTGFEYERQMKNPCCPKCRGKNPVYQRFRKW
IPCGNCKACLTTEDCGSCANCKKALNPDSRKPVSCRKRKCLCPIRKKLCEVAGQERELEH
AVVHVDPEYPKYAQRVTCLHKPEGPQKLDPHPMTNFKIDSGELQNSTPQYSDPEDFSVNV
DIDDDDEEFDGDDADYEAWIRKRKRRSCGKCEACNSRMDCGTCDFCIDKPKFGGSNKKRQ
KCRLRQCQKQAMRHLLPFQLGQTDFGSEEGWVQLGRPRPHFTYSRKTTPKKSKTPQREVD
LDFTDDIDEPLQEDDDHSMETAHWRPMLPSSSIPQDENFRNQLPTVQVHKETMEIVKKNA
LMERVPHILNHLSSPAYCTLFKPADPPVQYGETPGENTSLATPDGQSGMNGGRLSVEKHV
ETPSGEPEVEEVTPMITQIFSLADSAGTSGIDQDHELLKLLESLRSSALPTLWFAIMVEG
PILQLLQCSKLSHMVDTTVQIDLGFCYQICVQGQQLLLTHPLYEAHPSGLTSVPQVVNLL
LDLEKYNVCQGVPTKEQPFSQAPIIIERASTCDFLVLKETEHCPKCKALSCSY
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcgacggagaggtactcaaacctacaaatgatgcacttctagaaagggaggag
aggattgaggtcggggacaatgggatggagaggacctctgaggtcctatcaccactggag
gccctggctccctcagacagtcttgacattcaggatcatgccacctcaggtcctgtgatg
acagaccatggccatacagagaagatcccagggggagttgctttagagccccctatagac
tggtttgaacccctggaggatgacaattatgaagatgacacacagggcttggacatgggc
cttgctatgggggagcgacacatgaatagcagaggggatgctgaagaggagagtgttgca
gggagcgaaaggagcggaagcgtggcaggcagtgagaggaacatcaagaacaacaacaac
ctgttttctgtttataggcggaagaaaagagtgaaaactgaagagggctgggaggactgg
ccggcacttggagaggggtggaagcgcaaggcggttgttcgtcgctcgggttctagtgtt
ggccagagtgacgtttattacatgagcccgagtaatgagcgtgtgagaagtagggttgag
ctttccaaagtcctggcagatactctggacatgacaatgtttgattacaaagcaggggtg
ttcaggggtgctggacaacccaagacactgcgcctgagaaagaacatacagaaggatcat
tctacctcagtggactgtggcttttcctcagagtccagctccatgggcacgccaagcaga
gacacccacctccaacatatcactcccccaagaccaaacacctctctcacacagataagt
tcagcctctgttgctcatgatgtggaaggtatgaagcacagtgcaactaaactgccctgg
agccctgtgtcagcgctttcagtctccatcaatgggaaggctggttcagagccctccttt
tgcgtctgtaccatttgtgataattcatacacaggctttgagtatgaaagacagatgaag
aatccctgttgccccaaatgcaggggcaagaatccagtttatcaaagattcaggaagtgg
attccttgtggtaactgtaaggcatgccttaccacagaggattgtgggagctgtgctaac
tgcaaaaaagcgctgaaccctgactccagaaaacctgtcagctgtcggaaacgcaaatgt
ttatgtccgatccgcaagaagctgtgcgaagttgctggacaagagcgggaactggaacac
gctgtcgtacacgtcgatccagagtatcccaaatatgcccaaagagtgacatgtctgcac
aaacccgaaggtccccaaaagttggatccccatcccatgacgaatttcaagattgacagc
ggagaattgcagaactccactcctcagtacagtgaccccgaagatttctctgtgaatgtc
gatatagatgatgacgatgaagagtttgatggtgatgatgctgactatgaggcttggata
aggaaacgtaagcgacgctcctgtgggaagtgtgaagcttgtaatagtaggatggactgt
gggacttgtgatttctgcatagacaaacccaagtttggaggcagcaataagaagagacag
aagtgccgtctgcggcagtgccagaaacaggccatgagacacttgttgccctttcagttg
ggtcagactgattttgggtccgaagagggttgggtgcagcttggcaggcctagacctcac
tttacatacagtcgcaagaccaccccaaagaaaagtaaaacaccgcagcgggaagtggac
ctggatttcactgatgatatagacgagcctctgcaggaagatgatgatcactccatggaa
acggcacattggcgccctatgctacccagcagtagcataccccaggatgagaacttcaga
aaccagctaccgacagtccaggtgcataaagagactatggaaattgtcaaaaagaatgcg
cttatggagcgtgtcccacatatcctcaaccatttaagttctccagcatattgcacactg
ttcaaaccggcggatcccccagtgcaatatggtgaaaccccaggtgagaatacgtccttg
gcaaccccggatggacagagtggaatgaatggaggaaggctaagtgtggagaagcatgta
gaaacgccatctggagagcctgaagtagaggaggtcacacctatgatcactcagatcttc
agtttggctgacagtgcaggaacaagtgggatcgaccaggaccatgagctgctaaagcta
ctggagtccctgcgcagctctgcactccccacactctggtttgccataatggtggagggc
ccgattctacagctactgcagtgctccaagctctcccacatggtggacacaactgtccag
attgacctaggcttctgctatcagatctgtgtacagggccaacagctgctcctcacccac
cctctttatgaagctcacccatctggcctgacctctgtgccccaggtagtgaacctgctg
ctagatctggagaagtacaacgtgtgccagggggtcccgaccaaggagcagccattcagc
caggctccaatcatcattgagcgggcatcgacctgtgactttctggtacttaaagaaaca
gagcactgtccgaagtgtaaggccttatcgtgtagctattaa
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