Oncorhynchus tshawytscha (Chinook salmon): 112220010
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Entry
112220010 CDS
T05605
Symbol
lmnb1
Name
(RefSeq) lamin-B1
KO
K07611
lamin B
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04210
Apoptosis
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
112220010 (lmnb1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
112220010 (lmnb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112220010 (lmnb1)
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type V: Nuclear lamins
112220010 (lmnb1)
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Motif
Pfam:
Filament
LTD
CENP-F_leu_zip
DUF1326
Myosin_tail_1
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
112220010
NCBI-ProteinID:
XP_024237313
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Position
LG20:complement(39748134..39769477)
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AA seq
588 aa
AA seq
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MATATSTPAGQRISTRSTAGSTPLSPTRISRLQEKEDLCNLNDRLAIYIDKVRSLESENS
VLHLQISEKEDVRTRELTGLKSLYETELADARRSLDDTAKERARLQIELGKIKSDHEQLL
QNFAKKESDAAGALARLRDMETQLNSKEAMLATTLSEKRALEASLADLQGTVQELDSGLI
FAKKQLGEETLLRIDLENRYQSLSEELEFRKNMFEEEIKETRSRHETRLVEVDSGRAVEY
EFKLAQALTEMRGQHDEQVKLYKDEMENTYVAKLENVRLSSEMNSSSASMAREELRESCL
RVESLASQLASMQKETRGWQDRIHELESALAQERDTSRRMLGEKEREIAEIRAKMQMQLD
EYEQLLDVKLALDMEINAYRKLLEGEEERLKLSPSPSSRVTVSRAQSSSRSVRTARGKRK
RVDVEEQEASSSVSIAHSASTTGPVCIDELDTDGKFIRLHNTANENQAMVGYELTRTIGE
VSATYKFTPKYVLKAGQKVTVWASNAGVASNPPTDLVWKSQASWGTGEDVQVLLLNPQGE
EVARRSTSYKTAMEEDDDEDDEGVEVIEEDLFHQQGDPRATKRGCSIM
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccgcaacttcaactccggccggccaaagaataagcacccgctcgaccgccggt
agcactccattgagccccacgaggatatccaggttgcaggagaaagaagacctctgcaat
ttgaacgaccgtctagccatttatatcgacaaggtccggagtctagagtccgagaacagc
gttcttcacctgcagatttctgagaaggaagatgtaagaacccgggagcttactggtttg
aaatcactgtatgaaaccgagctcgctgacgctagaagatctctcgatgacaccgccaaa
gaacgcgcgaggttgcagattgaattgggaaaaatcaaatccgaccatgagcagttattg
cagaactttgccaagaaggagtctgatgcggctggcgccctggcccggctcagggacatg
gagacccagctgaactcgaaggaagcgatgttggccaccacactgtcagagaagagggcc
ctggaagccagcctggctgacctgcagggaactgtccaggagttggattctggcctgatc
tttgccaagaagcagctgggagaggagactctgcttcgcatcgacctggagaaccgttac
cagagcctgtctgaggagctggagttccgcaagaacatgttcgaggaggagatcaaggag
acaaggagtagacacgagactcgtctggtggaggtggactctggccgggctgtggagtac
gagttcaagctggcccaggccctgactgagatgagggggcagcacgacgagcaggtcaaa
ctgtacaaggacgagatggagaacacttacgtggccaagctggagaacgtgcgcctgtcg
tcggagatgaacagctcgtcggccagcatggcccgtgaggagctccgggagtcgtgcctg
cgtgtggagagcctagcctcccagctggccagcatgcagaaagagacccgtggatggcag
gaccggatccacgagctggagtcagccctggcccaggagagggacaccagccgcaggatg
ctgggggagaaggagcgggagatcgcggagatccgggccaaaatgcagatgcagctggac
gagtatgagcagctgctggatgtcaaattggccttggacatggagatcaatgcctacagg
aagctactggagggagaggaggagagactgaagctgtcccccagcccgtcgtcccgtgtc
accgtctcccgtgcccagtccagctctcgcagcgtgcgtaccgcccggggaaagagaaag
cgtgtggatgtggaagagcaggaggccagcagctccgtctccatcgcccactccgcctcc
accaccggcccagtgtgcattgatgagctcgacactgacgggaagttcatccgcctgcac
aacaccgccaatgagaaccaggccatggtgggctatgagctgaccaggaccatcggagaa
gtttctgccacctacaagtttactcccaaatatgtcttgaaggcaggccagaaagtcacg
gtgtgggcgtccaatgcgggtgtggcctccaacccccccacagacttggtgtggaagagc
caggcgtcctggggaacaggggaagatgtccaggtgctgctgctcaaccctcagggagag
gaggtggccaggaggagcacctcgtacaagacagccatggaggaagatgatgatgaggat
gacgagggagtggaggtcattgaggaagatctcttccaccagcagggagacccacgtgcc
accaagaggggttgctccataatgtga
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